; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G18440 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G18440
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCarbohydrate-binding X8 domain superfamily protein
Genome locationClcChr11:29040231..29040866
RNA-Seq ExpressionClc11G18440
SyntenyClc11G18440
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146007.1 glucan endo-1,3-beta-D-glucosidase [Cucumis sativus]1.4e-5388.7Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK A++LSFLLLFLSFLSG D+LA+NAQKTWCIPKPSSDQATLLANINYACA VDC+IMQKGCPCS PD LIN AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        L+VITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

XP_008452435.1 PREDICTED: glucan endo-1,3-beta-D-glucosidase [Cucumis melo]8.5e-5488.7Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK A++LSFLLLFLSFLSG D+LA+NAQKTWCIPKPSSDQATLLANINYACA VDC+IMQKGCPCS PD LIN AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        LV+ITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

XP_022982185.1 major pollen allergen Ole e 10-like isoform X1 [Cucurbita maxima]1.7e-4680.34Show/hide
Query:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNA-QKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRG
        MAKAA+ TLSFLLLFLS     D+LAVN  QKTWC+P+PSSD ATLLANI+YAC+ VDC+IMQKGCPC  PDNLINHA+IAM+LYYNSKGKNQWNCDFRG
Subjt:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNA-QKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRG

Query:  SGLVVITDPSYGNCIYP
        SGL+VITDPSYGNC+YP
Subjt:  SGLVVITDPSYGNCIYP

XP_022982186.1 major pollen allergen Ole e 10-like isoform X2 [Cucurbita maxima]1.0e-4679.31Show/hide
Query:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS
        MAKAA+ TLSFLLLFLS     D+LAVN  +TWC+P+PSSD ATLLANI+YAC+ VDC+IMQKGCPC  PDNLINHA+IAM+LYYNSKGKNQWNCDFRGS
Subjt:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVITDPSYGNCIYP
        GL+VITDPSYGNC+YP
Subjt:  GLVVITDPSYGNCIYP

XP_038899316.1 major pollen allergen Ole e 10 [Benincasa hispida]4.2e-5389.57Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK+A TLSFLLLFLSFLSG D+LAVNAQKTWCIPKPSSDQATLLANIN+AC+ VDC+IMQKGCPCS PD LIN AAIAMSLYYNSKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        L+VITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

TrEMBL top hitse value%identityAlignment
A0A0A0L4I1 Hydrolase, hydrolyzing O-glycosyl compounds7.0e-5488.7Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK A++LSFLLLFLSFLSG D+LA+NAQKTWCIPKPSSDQATLLANINYACA VDC+IMQKGCPCS PD LIN AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        L+VITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

A0A1S3BUY7 glucan endo-1,3-beta-D-glucosidase4.1e-5488.7Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK A++LSFLLLFLSFLSG D+LA+NAQKTWCIPKPSSDQATLLANINYACA VDC+IMQKGCPCS PD LIN AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        LV+ITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

A0A5A7VF23 Glucan endo-1,3-beta-D-glucosidase4.1e-5488.7Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG
        MAK A++LSFLLLFLSFLSG D+LA+NAQKTWCIPKPSSDQATLLANINYACA VDC+IMQKGCPCS PD LIN AAIAMSLYY+SKGKNQWNCDFRGSG
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSG

Query:  LVVITDPSYGNCIYP
        LV+ITDPSYGNCIYP
Subjt:  LVVITDPSYGNCIYP

A0A6J1IYM5 major pollen allergen Ole e 10-like isoform X24.9e-4779.31Show/hide
Query:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS
        MAKAA+ TLSFLLLFLS     D+LAVN  +TWC+P+PSSD ATLLANI+YAC+ VDC+IMQKGCPC  PDNLINHA+IAM+LYYNSKGKNQWNCDFRGS
Subjt:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVITDPSYGNCIYP
        GL+VITDPSYGNC+YP
Subjt:  GLVVITDPSYGNCIYP

A0A6J1J1Y2 major pollen allergen Ole e 10-like isoform X18.3e-4780.34Show/hide
Query:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNA-QKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRG
        MAKAA+ TLSFLLLFLS     D+LAVN  QKTWC+P+PSSD ATLLANI+YAC+ VDC+IMQKGCPC  PDNLINHA+IAM+LYYNSKGKNQWNCDFRG
Subjt:  MAKAAS-TLSFLLLFLSFLSGLDMLAVNA-QKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRG

Query:  SGLVVITDPSYGNCIYP
        SGL+VITDPSYGNC+YP
Subjt:  SGLVVITDPSYGNCIYP

SwissProt top hitse value%identityAlignment
P52409 Glucan endo-1,3-beta-glucosidase1.6e-1845.78Show/hide
Query:  WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIY
        WC+ K  ++   L  NINYAC  VDCK +Q G  C  P++L  HA+  M+ YY + G     CDF+G+G+V  +DPSYG C Y
Subjt:  WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIY

Q84V39 Major pollen allergen Ole e 101.9e-1640.23Show/hide
Query:  KTWCIPKPSSDQATLLANINYACAH--VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIY
        K WC+PK  +  A L +NI+Y C+   +DC  +Q    C +P+ +  HA+ AM+ +Y SKG+N ++CDF G+G +  +DPS G+C +
Subjt:  KTWCIPKPSSDQATLLANINYACAH--VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIY

Q94G86 Glucan endo-1,3-beta-D-glucosidase6.4e-2046.07Show/hide
Query:  AQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIYP
        A  +WC+PKP      L  NINYAC   +DC  +Q G  C +P+ +  HAA  M+LYY S G+N WNCDF  +  +  T+PSYG C +P
Subjt:  AQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIYP

Q9M069 Glucan endo-1,3-beta-glucosidase 72.3e-1740Show/hide
Query:  WCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIYP
        WC+PK  +    L A++++AC H +DC  +Q G  C +P+N+++HAA AM++Y+    K   +CDF  +  V   +PSY NC+YP
Subjt:  WCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCIYP

Q9ZU91 Glucan endo-1,3-beta-glucosidase 32.8e-1536.27Show/hide
Query:  LSGLDMLAVN--AQKTWCIPKPSSDQATLLANINYAC--AHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCI
        L+G   +  N    +T+CI K   D+  L A +++AC    VDC  + +G  C +PD+++ H+  A + YY   GK   +CDF+G   V  TDPS G C+
Subjt:  LSGLDMLAVN--AQKTWCIPKPSSDQATLLANINYAC--AHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYGNCI

Query:  YP
        +P
Subjt:  YP

Arabidopsis top hitse value%identityAlignment
AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein9.1e-3860Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQ-KTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS
        MAKA   LSF L+FL  +S  + + VNA+ KTWC+ KPSSDQ  L  NIN+AC+HVDC+++  GCPC  P NLINHA+IAM+LYY + G+N WNC+F+ S
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQ-KTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVITDPSYGNCIY
        GL+ IT+PSYGNC Y
Subjt:  GLVVITDPSYGNCIY

AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein1.1e-2745.3Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKT---WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFR
        MAKA   L F++    +  G  +    A ++   WC+ KPS+D   L  NIN+AC+ +DC+I+ +G  C  PD++I+ A++AM+LYY ++G++ WNC+F 
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKT---WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFR

Query:  GSGLVVITDPSYGNCIY
        GSGL+ ITDPSYG+CIY
Subjt:  GSGLVVITDPSYGNCIY

AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein7.7e-2150.65Show/hide
Query:  WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPS
        WC+ KP +    L+ N+NYAC+ VDC+I+     C  PDN+ N A++ M+LYY ++G+N WNC+F  SGLV ITDPS
Subjt:  WCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPS

AT4G09464.1 Carbohydrate-binding X8 domain superfamily protein1.0e-2040.87Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS
        MAK +S L+ L + LS +  ++ + V + KTWCI    +  A L ANIN+AC+  VDC+ ++ G  C  P+NL NHA+  M+ YY + G+    C F+ +
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVITDPSYGNCIY
        G    TDPS+G C+Y
Subjt:  GLVVITDPSYGNCIY

AT4G09467.1 Carbohydrate-binding X8 domain superfamily protein1.0e-2040.87Show/hide
Query:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS
        MAK +S L+ L + LS +  ++ + V + KTWCI    +  A L ANIN+AC+  VDC+ ++ G  C  P+NL NHA+  M+ YY + G+    C F+ +
Subjt:  MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAH-VDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGS

Query:  GLVVITDPSYGNCIY
        G    TDPS+G C+Y
Subjt:  GLVVITDPSYGNCIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCGGCCAGTACTCTCTCCTTTTTGCTTCTATTCCTCTCGTTCCTTTCAGGCCTTGATATGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCC
TTCGTCTGATCAAGCGACGCTGTTGGCTAATATCAATTACGCTTGTGCTCATGTAGATTGCAAAATAATGCAAAAAGGATGCCCCTGCTCTGACCCTGATAATTTGATCA
ACCATGCCGCCATCGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAATTGTGACTTCAGAGGATCTGGTCTCGTGGTCATCACTGATCCAAGTTATGGG
AACTGTATTTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGCGGCCAGTACTCTCTCCTTTTTGCTTCTATTCCTCTCGTTCCTTTCAGGCCTTGATATGCTGGCAGTAAATGCACAGAAAACGTGGTGCATTCCGAAGCC
TTCGTCTGATCAAGCGACGCTGTTGGCTAATATCAATTACGCTTGTGCTCATGTAGATTGCAAAATAATGCAAAAAGGATGCCCCTGCTCTGACCCTGATAATTTGATCA
ACCATGCCGCCATCGCTATGAGTTTGTATTACAATTCCAAAGGGAAGAATCAATGGAATTGTGACTTCAGAGGATCTGGTCTCGTGGTCATCACTGATCCAAGTTATGGG
AACTGTATTTACCCTTGA
Protein sequenceShow/hide protein sequence
MAKAASTLSFLLLFLSFLSGLDMLAVNAQKTWCIPKPSSDQATLLANINYACAHVDCKIMQKGCPCSDPDNLINHAAIAMSLYYNSKGKNQWNCDFRGSGLVVITDPSYG
NCIYP