; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G18550 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G18550
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:29096911..29098301
RNA-Seq ExpressionClc11G18550
SyntenyClc11G18550
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55027.1 hypothetical protein Csa_012520 [Cucumis sativus]6.5e-6585.35Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAA
        MEALWNLEDKWKLSTQQAF+L TCT  AV+G CAAAWAKKRKGEK  K   RRT   ++WWKW A   RRKGSGGGETPVRLLGRE EGEELGSRNSTAA
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAA

Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGE I VKTRLKDLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

XP_008465611.1 PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo]1.4e-6284.08Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA
        MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++WWKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAA
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA

Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        VWQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

XP_022976857.1 uncharacterized protein LOC111477103 isoform X2 [Cucurbita maxima]3.6e-6383.97Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        WQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYK+G+ +IVKTRLKDLL
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

XP_023534959.1 uncharacterized protein LOC111796532 isoform X2 [Cucurbita pepo subsp. pepo]2.5e-6484.62Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAAAWAK+R   K EK ERR+T A E+ WWK AA+ RK SGGGETPVRLLG EGEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        WQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYK+G+ IIVKTRLKDLL
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

XP_038899822.1 uncharacterized protein LOC120087050 isoform X2 [Benincasa hispida]5.7e-6989.68Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVW
        MEALWNLEDKWKLSTQQAFIL TCTAVAVVG C AAWAKKR   +GEKK+ RR T T +WWKWAAERRKGSGGGETPVRLL  EGEGEELGSRNSTAAVW
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        QRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYKEGEAIIVKTRLKDLL
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

TrEMBL top hitse value%identityAlignment
A0A0A0L376 Uncharacterized protein3.1e-6585.35Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAA
        MEALWNLEDKWKLSTQQAF+L TCT  AV+G CAAAWAKKRKGEK  K   RRT   ++WWKW A   RRKGSGGGETPVRLLGRE EGEELGSRNSTAA
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAA

Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGE I VKTRLKDLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

A0A1S3CQQ9 uncharacterized protein LOC1035032526.5e-6384.08Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA
        MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++WWKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAA
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA

Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        VWQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

A0A5D3DW00 Uncharacterized protein6.5e-6384.08Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA
        MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++WWKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAA
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAA

Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        VWQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

A0A6J1IGV7 uncharacterized protein LOC111477103 isoform X21.7e-6383.97Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL
        WQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYK+G+ +IVKTRLKDLL
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

A0A6J1II18 uncharacterized protein LOC111477103 isoform X19.1e-5785.11Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK-WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYK
        WQRPILMGEKCEMLKYSGLILYDERGRLLQ+QIAAMENGYK
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein5.6e-0665.62Show/hide
Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQE
        +WQR ILMG KCE L +SG+I YD  GRLL E
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLQE

AT3G14760.1 unknown protein2.5e-1435.03Show/hide
Query:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGE---------KGEKKERRRTTATEKWWKWAAERR--KGSGGGETPVRLLGREGEGE-
        MEALW LE+K KL+T++A ++   TA AV   C AA    R              E     RT   ++  KW+  +R   GS    +  + +  E   + 
Subjt:  MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGE---------KGEKKERRRTTATEKWWKWAAERR--KGSGGGETPVRLLGREGEGE-

Query:  -----ELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGR-----LLQEQIAAMENGYKEGEAIIVKTRLKDLL
             +  S N+   VWQRPILMGEKCE+ ++SGLILYDE G       LQE++          ++ +V+T L+DLL
Subjt:  -----ELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGR-----LLQEQIAAMENGYKEGEAIIVKTRLKDLL

AT3G18560.1 unknown protein3.6e-0541.25Show/hide
Query:  TTATEKWWKWAAERRKGSGGG---ETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQE
        TT + K       + K   GG   +T V ++  E E EE G       VWQR ILMG KCE L YSG+I YD  G  L++
Subjt:  TTATEKWWKWAAERRKGSGGG---ETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTTACGTGCACGGCGGTCGCGGTTGTTGGGTTCTGCGCGGCG
GCGTGGGCGAAGAAGAGGAAGGGAGAGAAGGGAGAGAAGAAAGAGCGCCGAAGGACGACGGCAACGGAGAAGTGGTGGAAATGGGCGGCAGAAAGGCGGAAGGGG
AGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCAGAGAAGGGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTA
ATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGACGATTGCTGCAGGAGCAAATCGCCGCCATGGAAAATGGTTACAAG
GAAGGAGAAGCCATAATAGTAAAGACAAGGTTGAAGGATTTACTCTGA
mRNA sequenceShow/hide mRNA sequence
AGAGTATTGGCTGATGTTCAAATATTGAAAATAACTACACCGGCAAGTTTCGACATAAAATCAAACTCACAATTATATAAAAATAATAATAATATATACCTTCCA
CTTGGTCATCATCCTCCCATGTCTTGAAAGCCATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTTACGTGCA
CGGCGGTCGCGGTTGTTGGGTTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAGGGAGAGAAGGGAGAGAAGAAAGAGCGCCGAAGGACGACGGCAACGGAGAAGT
GGTGGAAATGGGCGGCAGAAAGGCGGAAGGGGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCAGAGAAGGGGAAGGGGAAGAATTGGGAAGCCGGAATT
CGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGACGATTGCTGCAGG
AGCAAATCGCCGCCATGGAAAATGGTTACAAGGAAGGAGAAGCCATAATAGTAAAGACAAGGTTGAAGGATTTACTCTGATGCTCTTTCTCTTCTTTGGGAATCT
TCAAAAAAAGAGGTGTAAAAATTATACAAAGGGGTGAGGCTTTTTCCAATGTAATATCCCTTTCTTCTTTTGGATAGATTCTTTAAATAACCTTTCTTTCTTTCC
TCTTTTACACATTATCCACTTCTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPIL
MGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL