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Clc11G18730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G18730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:29279229..29279833
RNA-Seq ExpressionClc11G18730
SyntenyClc11G18730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066754.1 hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa]4.8e-2881.82Show/hide
Query:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
        MMGS+KFIMVALLVVA VLCQAHMSLGIRKLS KEMKM  MG     MLLGALP+GPTPPSAPSERGNPAPF DG+R+LVSAPSP  G
Subjt:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
KAG6607932.1 hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1358.11Show/hide
Query:  MGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDG
        M +KKF M A L +A +LCQ H +L IR    K+ K+ SMG +  DMLLG+LPRGP PPSAPS R NPAPF  G
Subjt:  MGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDG
KGN55050.1 hypothetical protein Csa_012928 [Cucumis sativus]9.1e-2780.68Show/hide
Query:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
        MMGSKK IMVALLVVALVL QAHMSLGIRKLS KEMKM  +G     MLLGALP+GPTPPSAPSERGNPAPF DG+R+LVSAPSP  G
Subjt:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
TrEMBL top hitse value%identityAlignment
A0A0A0KZH3 Uncharacterized protein4.4e-2780.68Show/hide
Query:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
        MMGSKK IMVALLVVALVL QAHMSLGIRKLS KEMKM  +G     MLLGALP+GPTPPSAPSERGNPAPF DG+R+LVSAPSP  G
Subjt:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
A0A5A7VHE0 Uncharacterized protein2.3e-2881.82Show/hide
Query:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
        MMGS+KFIMVALLVVA VLCQAHMSLGIRKLS KEMKM  MG     MLLGALP+GPTPPSAPSERGNPAPF DG+R+LVSAPSP  G
Subjt:  MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGCAGCAAAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTTGGTGCTGTGCCAAGCACACATGAGCTTGGGAATAAGGAAGTTATCCAAGAAGGAGATGAA
GATGGCTTCAATGGGGGCCATCGGTGTCGACATGCTTCTCGGCGCTCTTCCGAGAGGCCCGACGCCCCCTTCTGCCCCTAGCGAGCGAGGCAATCCTGCTCCTTTTGGTG
ATGGCAATCGTATCTTGGTATCTGCCCCAAGCCCTATAACAGGTCGTCACTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAATTGCAAAACCTTTCTTTTCAAGGCATTTAGCAAACTATGATGGGCAGCAAAAAGTTCATAATGGTGGCATTGTTGGTGGTGGCCTTGGTGCTGTGCC
AAGCACACATGAGCTTGGGAATAAGGAAGTTATCCAAGAAGGAGATGAAGATGGCTTCAATGGGGGCCATCGGTGTCGACATGCTTCTCGGCGCTCTTCCGAGAGGCCCG
ACGCCCCCTTCTGCCCCTAGCGAGCGAGGCAATCCTGCTCCTTTTGGTGATGGCAATCGTATCTTGGTATCTGCCCCAAGCCCTATAACAGGTCGTCACTAATTCATGAA
GTTCGAGACTATATTATTAGTGTTCAAATGGTTTTTCTCTCCAAGAAAAATGATATTGGTGACAAAGGTTTGGGTTCATATGTGTTTTGTTTAATAACCTTACCTTATTG
TTACACACACACGCGCGCGCGCTCATGAATATGTATGCATAATATAATGTTGGTTTATAGATGTGTTATTGTTGTTAAATATGATGTGTTGGAATGAAATTTGAATAGAG
CTTTAATTAACTCTTTTGTTTTAGAAGTCTTAATTAGTTATTGGTTGCTGTCTAT
Protein sequenceShow/hide protein sequence
MMGSKKFIMVALLVVALVLCQAHMSLGIRKLSKKEMKMASMGAIGVDMLLGALPRGPTPPSAPSERGNPAPFGDGNRILVSAPSPITGRH