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Clc11G18740 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G18740
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionhistidine-rich glycoprotein-like
Genome locationClcChr11:29288375..29289421
RNA-Seq ExpressionClc11G18740
SyntenyClc11G18740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591765.1 hypothetical protein SDJN03_14111, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2465.25Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGH--GGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHG-HDHDADVDGLDDH
        MAYSKTFLLLGLLLALLFISSHVSAR LEEKK D+ESD HGHHDHGHH  GH   GHH HDA V+ LDGH      HGHH  GH G H HDADVD LD H
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGH--GGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHG-HDHDADVDGLDDH

Query:  HGHHG-------GGHGGHHG--GHHGGH-HDHDAEAQGIKN
        HGHH          H  HH    HHG H HDHDA+ + +KN
Subjt:  HGHHG-------GGHGGHHG--GHHGGH-HDHDAEAQGIKN

KAG7024647.1 hypothetical protein SDJN02_13465, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-2464.54Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGH--GGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHG-HDHDADVDGLDDH
        MAYSKTFLLLGLLLALLF+SSHVSAR LEEKK D+ESD HGHHDHGHH  GH   GHH HDA V+ LDGH      HGHH  GH G H HDADVD LD H
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGH--GGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHG-HDHDADVDGLDDH

Query:  HGHHG-------GGHGGHHG--GHHGGH-HDHDAEAQGIKN
        HGHH          H  HH    HHG H HDHDA+ + +KN
Subjt:  HGHHG-------GGHGGHHG--GHHGGH-HDHDAEAQGIKN

XP_022138889.1 histidine-rich membrane protein KE4 homolog 2-like [Momordica charantia]3.7e-2661.49Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHH---GHDHDADVDGLDDH
        MAYSKT LLLGLLLALLF+SSHVSARLL EKKG +E DDH HHDH          HDH        GHH HDHDHGHHDH H    GH HDAD+D LDDH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHH---GHDHDADVDGLDDH

Query:  HGHHGGGHGGHHGGHHG-----------------GHHDHDAEAQGIKN
        HGHHGGGHGGHHGG HG                 GHHDHD++  G+KN
Subjt:  HGHHGGGHGGHHGGHHG-----------------GHHDHDAEAQGIKN

XP_022935989.1 histidine-rich glycoprotein-like [Cucurbita moschata]5.1e-2367.42Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH
        MAYSKTFLLLGLLLALLFISSHVSAR LEEKK D+ESD HGHHDHGHH     GHH HDA V+ LDGHH H   HG    GHHG  HDAD+D LD HHGH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH

Query:  HG-GGHGGHHG--GHHGGH-HDHDAEAQGIKN
        H    H  HH    HHG H HDHDA+ + +KN
Subjt:  HG-GGHGGHHG--GHHGGH-HDHDAEAQGIKN

XP_038900076.1 histidine-rich glycoprotein-like [Benincasa hispida]8.3e-2667.44Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH
        MAYSKT L+LGLLLALLF+SSHVSARLLEE KG +ESD HGHH           HHDH        GHHHHDH H  HDHGHHGHDHDA+VDGLD HHGH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH

Query:  HGGGHGGHHGGHHG---------GHHDHD
        HGGGH GHHGGHHG         GHH HD
Subjt:  HGGGHGGHHGGHHG---------GHHDHD

TrEMBL top hitse value%identityAlignment
A0A6J1CBC6 histidine-rich membrane protein KE4 homolog 2-like1.8e-2661.49Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHH---GHDHDADVDGLDDH
        MAYSKT LLLGLLLALLF+SSHVSARLL EKKG +E DDH HHDH          HDH        GHH HDHDHGHHDH H    GH HDAD+D LDDH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHH---GHDHDADVDGLDDH

Query:  HGHHGGGHGGHHGGHHG-----------------GHHDHDAEAQGIKN
        HGHHGGGHGGHHGG HG                 GHHDHD++  G+KN
Subjt:  HGHHGGGHGGHHGGHHG-----------------GHHDHDAEAQGIKN

A0A6J1F6Z1 histidine-rich protein PFHRP-II-like8.5e-0843.09Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGH----------------HDHGHHG----------------GGHG-------GHHDHDAE
        M Y +T LLL LLLALLF+SSHVSAR L E+  D ESD HG+                HDHGHHG                GG G       GHH  + +
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGH----------------HDHGHHG----------------GGHG-------GHHDHDAE

Query:  VNYLD---GH------HHHDHDHGHHDHGHHGHDHDADVDGLDDHHGHHGGGHGGHHG--------------GHHGGHHDH
        V+ LD   GH       HH HDH   DHGHHG   DA+++GLD+ HGHH  GHGGHHG              G HG H  H
Subjt:  VNYLD---GH------HHHDHDHGHHDHGHHGHDHDADVDGLDDHHGHHGGGHGGHHG--------------GHHGGHHDH

A0A6J1F6Z7 histidine-rich glycoprotein-like2.5e-2367.42Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH
        MAYSKTFLLLGLLLALLFISSHVSAR LEEKK D+ESD HGHHDHGHH     GHH HDA V+ LDGHH H   HG    GHHG  HDAD+D LD HHGH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGH

Query:  HG-GGHGGHHG--GHHGGH-HDHDAEAQGIKN
        H    H  HH    HHG H HDHDA+ + +KN
Subjt:  HG-GGHGGHHG--GHHGGH-HDHDAEAQGIKN

A0A6J1IKT3 histidine-rich glycoprotein-like7.1e-2360.93Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHD---------------------HGHHGGGHGGHHDHDAEVNYLDGHH-HHDHDHGHH
        MAYSKTFLLLGLLLALLF+SSHVSAR LEEKK D+ESD HGHHD                     HGHHGGGHGGHH HDA+V+ LDGHH HHDH H HH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHD---------------------HGHHGGGHGGHHDHDAEVNYLDGHH-HHDHDHGHH

Query:  DHGHHGHDHDADVDGLDDHHGHHGGGHGGHHGGHHGGH-HDHDAEAQGIKN
        DH H  HDH        DHH HH   H  HH  HHG H HDHDA+ + +KN
Subjt:  DHGHHGHDHDADVDGLDDHHGHHGGGHGGHHGGHHGGH-HDHDAEAQGIKN

A0A6J1J1J4 histidine-rich glycoprotein-like3.8e-0854.26Show/hide
Query:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNY-LDGHHHHDH-DHGHHDHGHHGH-DHDADVDGLDDH
        MAYSKTFLLL LLLALL++SSHVSARLLEEKK  ++SDDH   DH H  G H   HDHD E ++  D H H DH DH H DH  H H DHD D     DH
Subjt:  MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNY-LDGHHHHDH-DHGHHDHGHHGH-DHDADVDGLDDH

Query:  HGHHGGGHGGHHGGHHGGHHDHDAEAQGI
        + H    H  H    H   HDHDA+   +
Subjt:  HGHHGGGHGGHHGGHHGGHHDHDAEAQGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACTCTAAGACCTTTCTCCTTCTCGGTCTCCTCCTCGCTCTTCTTTTCATCTCCTCTCATGTCTCGGCTCGTCTACTCGAGGAAAAGAAAGGTGATATAGAGAG
TGATGATCATGGACATCACGACCACGGTCACCATGGTGGAGGGCATGGTGGACACCACGACCACGATGCTGAGGTCAATTACCTAGACGGTCATCATCACCATGACCACG
ACCATGGACACCATGACCACGGCCACCACGGTCACGACCATGATGCTGATGTCGATGGTTTAGATGATCACCATGGACACCACGGCGGAGGACATGGTGGACACCATGGC
GGACACCACGGCGGACACCACGACCACGATGCAGAAGCTCAAGGCATTAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
AATGCAATGGTTAAGCACCAAAAAAGAAAAAATAGCCCAAAGTTAAGCAAACCACTTTTGCATTTCCAACTGAGCTTGGTTAACCAAAAATGGCTTACTCTAAGACCTTT
CTCCTTCTCGGTCTCCTCCTCGCTCTTCTTTTCATCTCCTCTCATGTCTCGGCTCGTCTACTCGAGGAAAAGAAAGGTGATATAGAGAGTGATGATCATGGACATCACGA
CCACGGTCACCATGGTGGAGGGCATGGTGGACACCACGACCACGATGCTGAGGTCAATTACCTAGACGGTCATCATCACCATGACCACGACCATGGACACCATGACCACG
GCCACCACGGTCACGACCATGATGCTGATGTCGATGGTTTAGATGATCACCATGGACACCACGGCGGAGGACATGGTGGACACCATGGCGGACACCACGGCGGACACCAC
GACCACGATGCAGAAGCTCAAGGCATTAAGAATTAGAGACCTAAAACCTACACCATGTCTGCTACCACGTTGTTTAACAATAAAAGTTTGTTACTGTACGATGAAAAATA
AAGTTTGTTTTGTCTGTGTGTTCTAAATTTTAAATAAAGCCAATGATAGGCTATATGAAATGTTAAAATACCATACTTTGTTTGGTTTGTTACAATTTATGATCTTTGTA
GCTTTTATTTATATGTAACGTCAAAACTATATATAAAGTTGATTTGCATTGTATGTGGCTCAATATTCAATATTATTATTGTTAGTTTTA
Protein sequenceShow/hide protein sequence
MAYSKTFLLLGLLLALLFISSHVSARLLEEKKGDIESDDHGHHDHGHHGGGHGGHHDHDAEVNYLDGHHHHDHDHGHHDHGHHGHDHDADVDGLDDHHGHHGGGHGGHHG
GHHGGHHDHDAEAQGIKN