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Clc11G19460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G19460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:29933172..29933899
RNA-Seq ExpressionClc11G19460
SyntenyClc11G19460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064333.1 hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]2.5e-1960.8Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASRLILKD K  LRFL LRNPASSAPSAQ IQNLLLPI PRQ  SG LG VC+  RP LS   NSS DGG RIEVRGK+E    + D   E +S+ + E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSDDFSG--DEFSDNDDAEPEDDDN
          D F    D+F D D+ EP+DDD+
Subjt:  FSDDFSG--DEFSDNDDAEPEDDDN

KAE8649846.1 hypothetical protein Csa_012085 [Cucumis sativus]1.2e-1860.98Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASRLILKD K  LRFL LRNPASSAPSAQ IQNLLLPI PRQS   +L  VC+ DRP LS  LNS  DGG RIEVRG+++  + + D+  E +S+S+ E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSDDFSGDEFSDNDDAEPEDDDN
        FSD+   DE  D +D EP+DDD+
Subjt:  FSDDFSGDEFSDNDDAEPEDDDN

KAG6591964.1 hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia]9.2e-2261.54Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASR ILKD K  + FL LRNPASS P AQ+I N LLP  P QSASG L  +  SDRPLL R  NSSFDGG RIEVRGK++P IE+ DE G  ES+SD E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSD--------DFSGDEFSDNDDAEPEDDD
         SD        +FSG +FSD+DDAEP DD+
Subjt:  FSD--------DFSGDEFSDNDDAEPEDDD

XP_022936831.1 uncharacterized protein LOC111443300 [Cucurbita moschata]1.0e-2060.77Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASR ILKD K  + FL LRNPASS P AQ+I N LLP  P QSASG L  +  SDRPLL R  NSSFDGG RIEVRGK++P IE+ DE  +++S+SD E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSD--------DFSGDEFS-DNDDAEPEDD
         SD        +FSGD+FS D+DDAEP DD
Subjt:  FSD--------DFSGDEFS-DNDDAEPEDD

XP_022976605.1 uncharacterized protein LOC111476951 [Cucurbita maxima]4.4e-2463.08Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASR ILKD K  + +L+LRNPASS P AQ+IQN LLP  PRQSASG L  +  SDRPLL R  NSSFDGG RIEVRGK++P IE+ DE  ++ESESDLE
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSDDFSG--------DEFSDNDDAEPEDDD
         SD F+G        D+FSD+DDAEP DD+
Subjt:  FSDDFSG--------DEFSDNDDAEPEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0L3F1 Uncharacterized protein2.0e-0686.36Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQS
        MASRLILKD K  LRFL LRNPASSAPSAQ IQNLLLPI PRQS
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQS

A0A5A7V875 Uncharacterized protein1.2e-1960.8Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASRLILKD K  LRFL LRNPASSAPSAQ IQNLLLPI PRQ  SG LG VC+  RP LS   NSS DGG RIEVRGK+E    + D   E +S+ + E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSDDFSG--DEFSDNDDAEPEDDDN
          D F    D+F D D+ EP+DDD+
Subjt:  FSDDFSG--DEFSDNDDAEPEDDDN

A0A6J1F8K5 uncharacterized protein LOC1114433004.9e-2160.77Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASR ILKD K  + FL LRNPASS P AQ+I N LLP  P QSASG L  +  SDRPLL R  NSSFDGG RIEVRGK++P IE+ DE  +++S+SD E
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSD--------DFSGDEFS-DNDDAEPEDD
         SD        +FSGD+FS D+DDAEP DD
Subjt:  FSD--------DFSGDEFS-DNDDAEPEDD

A0A6J1IJY0 uncharacterized protein LOC1114769512.1e-2463.08Show/hide
Query:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE
        MASR ILKD K  + +L+LRNPASS P AQ+IQN LLP  PRQSASG L  +  SDRPLL R  NSSFDGG RIEVRGK++P IE+ DE  ++ESESDLE
Subjt:  MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLE

Query:  FSDDFSG--------DEFSDNDDAEPEDDD
         SD F+G        D+FSD+DDAEP DD+
Subjt:  FSDDFSG--------DEFSDNDDAEPEDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTAGCACTCCGATTCCTTATTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCT
TCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGA
TCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGACAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTT
TCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGA
mRNA sequenceShow/hide mRNA sequence
CTGGTTTGTTCCAACAACTTTCTAGAACTGTTTCCAAAAACCCTAAACCCTCTTCTCTAGCCGCGCTATAAATACCCATTCCTCATTTCATTTCTTCCCCTCCAATTTCT
CCTCTCTACATATCTCCCTCCATTCTTCAGACTCCCGCAATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTAGCACTCCGATTCCTTATTCTTCGCAATCCAGCCTC
ATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGT
CTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGACAGATGAGTTCGGCGAGAACGAAAGCGAGAGC
GATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGATTGATCGATATGTCTACATATACTGCTGT
TTGAATTTCAATTTTGGATTCATATCGTGTTGATAATTGATGATTTGGTTTCGATATATCCGTAGAATTGAAAGTGCTCGAGTGTTGACATCGATAAATCTGTGTTTTGA
TACCATTTTGGTCATGGATATTCATTTTTTTTAAGAAATTTTTAGTTCATTCCACTTTTGTTTAGTCC
Protein sequenceShow/hide protein sequence
MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLEFSDDFSGDEF
SDNDDAEPEDDDN