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Clc11G19690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G19690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiondefensin-like protein 1
Genome locationClcChr11:30180452..30182252
RNA-Seq ExpressionClc11G19690
SyntenyClc11G19690
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150110.1 defensin-like protein 1 [Cucumis sativus]2.2e-2390.32Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGNSAKM+VALLFLL LMLSMNEKQGVVEAKVCE+RSKTWSGWCGNT +CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

XP_008454663.1 PREDICTED: defensin-like protein 1 [Cucumis melo]1.2e-2185.48Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGNSAKM+VA LFLL L LSMNEKQGVVEAKVCE+RSKTWSGWCG+T +CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]3.0e-2082.26Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M K + NSAKM VA LFL  LMLSMNEK GVVEAKVCE+RSKTWSGWCGNTS+CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

XP_038900009.1 defensin-like protein 1 [Benincasa hispida]2.5e-2288.71Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGN A+MVVALLFLL LMLSMNEKQG+VEAKVCEKRSKTWSGWCG+TS+CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]2.6e-3276.36Show/hide
Query:  EVIDGTLDMNENEIFVRVFGLEKHKHICGYRVGVTPSELFGSSSNISDLERRLNESKQRLQESEQQRK-------VEVEALKHQMSELENRFEDRFQKMM
        +VIDGTLDMNE+E FVRVFG EKH H+ GY VGVTPSELFGSSS I D ERRLNES+QRLQE EQQRK       +EVE LK Q+SELENRFEDRFQKMM
Subjt:  EVIDGTLDMNENEIFVRVFGLEKHKHICGYRVGVTPSELFGSSSNISDLERRLNESKQRLQESEQQRK-------VEVEALKHQMSELENRFEDRFQKMM

Query:  AEMRKEFVSS
        AEM K+FVSS
Subjt:  AEMRKEFVSS

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein1.1e-2390.32Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGNSAKM+VALLFLL LMLSMNEKQGVVEAKVCE+RSKTWSGWCGNT +CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

A0A1S3BZX7 defensin-like protein 15.9e-2285.48Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGNSAKM+VA LFLL L LSMNEKQGVVEAKVCE+RSKTWSGWCG+T +CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

A0A5A7T656 Defensin-like protein 15.9e-2285.48Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M KVVGNSAKM+VA LFLL L LSMNEKQGVVEAKVCE+RSKTWSGWCG+T +CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

A0A6J1FBE9 defensin-like protein 18.0e-1977.42Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M K + +SAKM VA LFL  LMLSMN + GVVEAKVCE+RSKTWSGWCGNTS+CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

A0A6J1IJY9 defensin-like protein 11.5e-2082.26Show/hide
Query:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        M K + NSAKM VA LFL  LMLSMNEK GVVEAKVCE+RSKTWSGWCGNTS+CDRQCKNWE
Subjt:  MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

SwissProt top hitse value%identityAlignment
O24332 Defensin-like protein 39.8e-0639.74Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC
        +VALLF  +++ +  E   VVEAK+CE+ S TWSG CGN + C  QC     ++G    + N +F        HK IC
Subjt:  VVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC

P0C8Y4 Defensin-like protein 13.4e-0671.43Show/hide
Query:  KVCEKRSKTWSGWCGNTSNCDRQCKNWE
        ++CEK SKTWSG CGNT +CD QCK+WE
Subjt:  KVCEKRSKTWSGWCGNTSNCDRQCKNWE

P82787 Defensin-like protein 191.0e-0749.09Show/hide
Query:  AKMVVALLFL-LVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        A     +LFL L + L  + +   VE ++CE+RSKTW+G+CGNT  CD QCK WE
Subjt:  AKMVVALLFL-LVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

Q39313 Defensin-like protein 38.3e-0535.9Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC
        ++ LLF  +++ +  E   +VEAK+CE+ S TWSG CGN + C  QC     ++G    + N +F        HK IC
Subjt:  VVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC

Q7M1F2 Defensin-like protein 11.1e-0462.96Show/hide
Query:  VCEKRSKTWSGWCGNTSNCDRQCKNWE
        +CE+ S TW+G CGNT +CD QC+NWE
Subjt:  VCEKRSKTWSGWCGNTSNCDRQCKNWE

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein7.4e-0949.09Show/hide
Query:  AKMVVALLFL-LVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE
        A     +LFL L + L  + +   VE ++CE+RSKTW+G+CGNT  CD QCK WE
Subjt:  AKMVVALLFL-LVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWE

AT1G75830.1 low-molecular-weight cysteine-rich 671.4e-0446.15Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWE
        +V L F  ++  +  E   VVEA K+CE+ S TWSG CGN++ C  QC N E
Subjt:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWE

AT2G26010.1 plant defensin 1.35.0e-0536.71Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC
        ++  LF  +++ +  E   +VEA K+CEK S TWSG CGN++ C  QC N   ++G    + N +F        HK IC
Subjt:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC

AT5G44420.1 plant defensin 1.22.2e-0535.44Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC
        ++ L+F  +++ +  +   +VEA K+CEK S TWSG CGN++ C  QC N   ++G    + N +F        HK IC
Subjt:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC

AT5G44430.1 plant defensin 1.2C2.9e-0536.71Show/hide
Query:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC
        ++  LF  +++ +  E   +VEA K+CEK S TWSG CGN++ C  QC N   ++G    + N +F        HK IC
Subjt:  VVALLFLLVLMLSMNEKQGVVEA-KVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTG
CGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGTGATCGATGGTACACTTGACATGAACGAGAATG
AGATTTTTGTACGAGTATTTGGATTGGAGAAACACAAACATATTTGTGGTTATAGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAATATAAGCGATCTT
GAACGTCGCCTTAATGAGTCCAAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTCAAGCATCAAATGAGCGAATTAGAAAATCGTTTTGA
GGATAGATTTCAAAAAATGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTG
CGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGTGATCGATGGTACACTTGACATGAACGAGAATG
AGATTTTTGTACGAGTATTTGGATTGGAGAAACACAAACATATTTGTGGTTATAGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAATATAAGCGATCTT
GAACGTCGCCTTAATGAGTCCAAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTCAAGCATCAAATGAGCGAATTAGAAAATCGTTTTGA
GGATAGATTTCAAAAAATGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA
Protein sequenceShow/hide protein sequence
MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGLEKHKHICGYRVGVTPSELFGSSSNISDL
ERRLNESKQRLQESEQQRKVEVEALKHQMSELENRFEDRFQKMMAEMRKEFVSS