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Clc11G19700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G19700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiondefensin-like protein 1
Genome locationClcChr11:30186605..30187419
RNA-Seq ExpressionClc11G19700
SyntenyClc11G19700
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150110.1 defensin-like protein 1 [Cucumis sativus]4.9e-3585.71Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGNSAKM+VALLFLLALMLSMNEKQGVVEA VCE+RSKTWSGWCGNT HCDRQCKNWE A HGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

XP_008454663.1 PREDICTED: defensin-like protein 1 [Cucumis melo]5.5e-3483.33Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGNSAKM+VA LFLLAL LSMNEKQGVVEA VCE+RSKTWSGWCG+T HCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]1.3e-3280.95Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M K + NSAKM VA LFL ALMLSMNEK GVVEA VCE+RSKTWSGWCGNTSHCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

XP_023535147.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]1.5e-3178.57Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M K + NSAKM VA +FL ALMLS NEK GVVEA VCE+RSKTWSGWCGNTSHCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

XP_038900009.1 defensin-like protein 1 [Benincasa hispida]1.1e-3485.71Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGN A+MVVALLFLLALMLSMNEKQG+VEA VCEKRSKTWSGWCG+TSHCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein2.4e-3585.71Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGNSAKM+VALLFLLALMLSMNEKQGVVEA VCE+RSKTWSGWCGNT HCDRQCKNWE A HGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

A0A1S3BZX7 defensin-like protein 12.6e-3483.33Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGNSAKM+VA LFLLAL LSMNEKQGVVEA VCE+RSKTWSGWCG+T HCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

A0A5A7T656 Defensin-like protein 12.6e-3483.33Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M KVVGNSAKM+VA LFLLAL LSMNEKQGVVEA VCE+RSKTWSGWCG+T HCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

A0A6J1FBE9 defensin-like protein 13.6e-3177.38Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M K + +SAKM VA LFL ALMLSMN + GVVEA VCE+RSKTWSGWCGNTSHCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

A0A6J1IJY9 defensin-like protein 16.5e-3380.95Show/hide
Query:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        M K + NSAKM VA LFL ALMLSMNEK GVVEA VCE+RSKTWSGWCGNTSHCDRQCKNWE AKHGACH  F  RAC+CYFNC
Subjt:  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

SwissProt top hitse value%identityAlignment
P0C8Y4 Defensin-like protein 11.6e-1567.35Show/hide
Query:  VCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        +CEK SKTWSG CGNT HCD QCK+WE A HGACH    +  C+CYFNC
Subjt:  VCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

P22357 Anther-specific protein SF18 (Fragment)4.7e-1252.83Show/hide
Query:  VEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        V   +CEK SKTW G C +T  CD++C +WE AKHGACH    +  C+CYF+C
Subjt:  VEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

P82787 Defensin-like protein 191.7e-1753.25Show/hide
Query:  AKMVVALLFL-LALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        A     +LFL L++ L  + +   VE  +CE+RSKTW+G+CGNT  CD QCK WE A HGACH  F   AC+CYFNC
Subjt:  AKMVVALLFL-LALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

Q7M1F2 Defensin-like protein 13.8e-1462.26Show/hide
Query:  NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRA---CYCYFNC
        N+CE+ S TW+G CGNT HCD QC+NWE AKHGACH    +R    C+CYFNC
Subjt:  NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRA---CYCYFNC

Q7M1F3 Defensin-like protein 15.5e-1361.7Show/hide
Query:  EKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        E+ S+TWSG CGNT+HCD+QC++WE A HGACH       C+CYFNC
Subjt:  EKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein1.2e-1853.25Show/hide
Query:  AKMVVALLFL-LALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        A     +LFL L++ L  + +   VE  +CE+RSKTW+G+CGNT  CD QCK WE A HGACH  F   AC+CYFNC
Subjt:  AKMVVALLFL-LALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

AT1G75830.1 low-molecular-weight cysteine-rich 675.3e-1144.59Show/hide
Query:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        +V L F   +  +  E   VVEA  +CE+ S TWSG CGN++ C  QC N E A+HG+C+  F    C CYF C
Subjt:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

AT2G26010.1 plant defensin 1.32.4e-1144.59Show/hide
Query:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        ++  LF   ++ +  E   +VEA  +CEK S TWSG CGN++ C  QC N E AKHG+C+  F    C CYF C
Subjt:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

AT5G44420.1 plant defensin 1.26.9e-1141.89Show/hide
Query:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        ++ L+F   ++ +  +   +VEA  +CEK S TWSG CGN++ C  QC N E AKHG+C+  F    C CY  C
Subjt:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC

AT5G44430.1 plant defensin 1.2C9.0e-1143.24Show/hide
Query:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC
        ++  LF   ++ +  E   +VEA  +CEK S TWSG CGN++ C  QC N E AKHG+C+  F    C CY  C
Subjt:  VVALLFLLALMLSMNEKQGVVEA-NVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAATGTGTG
CGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCCATTGCGACCGACAATGCAAGAATTGGGAAGATGCCAAACATGGAGCTTGCCATGGTCCATTTT
TTAGGAGGGCTTGTTATTGCTACTTCAACTGTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAATTGAAAGAATAGAAATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGAGAAGCAAGGG
GTGGTGGAGGCGAATGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCCATTGCGACCGACAATGCAAGAATTGGGAAGATGCCAAACATGG
AGCTTGCCATGGTCCATTTTTTAGGAGGGCTTGTTATTGCTACTTCAACTGTTAAAAACCATGCAATAACCATATGATGATCATAATCTCCTTCTCCATATATATATATA
TATATATATATATATATATATATATATATATATCATTTCCCTTTTACAACAAAAATAAATAAATAAAAGTTTGTGTGTTTTATTATGTAGGTGTGAAGGAGTCTATATGT
AATATTAGTTTTTAATTAATGTTTTTAAGTTTAAGAAGTTTATTGTGGTTTGTGTGATAAATATATATGCTGCTACTTATCTTTGGCAGCTTGTTTGTGTGTTTCTTCTT
CTTTACATCTTAATATTGAATAAAATGATTTAGATTACTCTCTCTTCTATTC
Protein sequenceShow/hide protein sequence
MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTWSGWCGNTSHCDRQCKNWEDAKHGACHGPFFRRACYCYFNC