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Clc11G19840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G19840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:30300392..30303990
RNA-Seq ExpressionClc11G19840
SyntenyClc11G19840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036794.1 uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa]2.7e-2077.03Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KVTVPPKRDWKQMGHE ATVAVHEEMKRVQ+ PSNSTYATHRL+            RTVSQEEELELLF+GLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

KAG6591989.1 hypothetical protein SDJN03_14335, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1466.22Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KV+V PK D KQMGH+ A V V EEMKRVQ+LPSNSTYATHR++            RT SQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

XP_004150100.1 uncharacterized protein LOC101214758 [Cucumis sativus]2.9e-1974.32Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KV VP KRDWKQMGHEGATVAVHEEMKRVQ+ PSNSTYATHRL+            RT+SQEEELELLF+GLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

XP_022139403.1 uncharacterized protein LOC111010342 [Momordica charantia]3.0e-1666.22Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHR------------LKRTVSQEEELELLFAGLSL
        KV+ PPK +WKQMGHE  TV VH+EMKRVQ+LPSNS YATHR            ++RT SQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHR------------LKRTVSQEEELELLFAGLSL

XP_038898294.1 uncharacterized protein LOC120085994 [Benincasa hispida]6.1e-1772.97Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        K TV PKR WKQM H+ AT AVHEEMKRVQRLPSNSTYATHRL+            RTVSQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

TrEMBL top hitse value%identityAlignment
A0A0A0LFX0 Uncharacterized protein1.4e-1974.32Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KV VP KRDWKQMGHEGATVAVHEEMKRVQ+ PSNSTYATHRL+            RT+SQEEELELLF+GLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

A0A5A7SZV0 Uncharacterized protein1.3e-2077.03Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KVTVPPKRDWKQMGHE ATVAVHEEMKRVQ+ PSNSTYATHRL+            RTVSQEEELELLF+GLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

A0A6J1CCW1 uncharacterized protein LOC1110103421.5e-1666.22Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHR------------LKRTVSQEEELELLFAGLSL
        KV+ PPK +WKQMGHE  TV VH+EMKRVQ+LPSNS YATHR            ++RT SQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHR------------LKRTVSQEEELELLFAGLSL

A0A6J1F6C2 uncharacterized protein LOC1114425872.4e-1466.22Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KV+V PK + KQMGH+ A V V EEMKRVQ+LPSNSTYATHRL+            RT SQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

A0A6J1IHD5 uncharacterized protein LOC1114769582.4e-1466.22Show/hide
Query:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        KV+V PK + KQMGH+ A V V EEMKRVQ+LPSNSTYATHRL+            RT SQEEELELLFAGLSL
Subjt:  KVTVPPKRDWKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13677.1 unknown protein8.3e-0451.43Show/hide
Query:  WKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK
        W +M  +  +  + EE+KRV +LPSNS YA HRLK
Subjt:  WKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK

AT3G13677.2 unknown protein1.9e-0849.23Show/hide
Query:  WKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL
        W +M  +  +  + EE+KRV +LPSNS YA HRLK            RT+SQE+ELELLF  LSL
Subjt:  WKQMGHEGATVAVHEEMKRVQRLPSNSTYATHRLK------------RTVSQEEELELLFAGLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGCAACGGCGTTCGTTTAGAGCTTTGCTTTTGTCCTGCCGCTGGGGGCGCCGAAGGTTGTGCAATAACGAAACCGATGGTAGCTGTAGGACTTGTTAAG
ATTTTCGTTATGAGAGATCAAGTGTTTGCTTTTCCAGTTATTGAGATTAAAGTTAAACAGGGTTATGATTTGACTCCCATTTTGGAATTTGTTTTATTGTGGCAT
TATTTGATGGAGATGATCTTGATCCAATGCAGCATTTGTAAAGTCACTGTCCCACCTAAAAGAGATTGGAAACAAATGGGACATGAAGGGGCAACCGTGGCTGTT
CATGAAGAAATGAAACGAGTGCAACGGCTTCCTTCTAACAGTACCTATGCTACTCATCGGTTGAAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTT
GCTGGGCTTTCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGCAACGGCGTTCGTTTAGAGCTTTGCTTTTGTCCTGCCGCTGGGGGCGCCGAAGGTTGTGCAATAACGAAACCGATGGTAGCTGTAGGACTTGTTAAG
ATTTTCGTTATGAGAGATCAAGTGTTTGCTTTTCCAGTTATTGAGATTAAAGTTAAACAGGGTTATGATTTGACTCCCATTTTGGAATTTGTTTTATTGTGGCAT
TATTTGATGGAGATGATCTTGATCCAATGCAGCATTTGTAAAGTCACTGTCCCACCTAAAAGAGATTGGAAACAAATGGGACATGAAGGGGCAACCGTGGCTGTT
CATGAAGAAATGAAACGAGTGCAACGGCTTCCTTCTAACAGTACCTATGCTACTCATCGGTTGAAGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTT
GCTGGGCTTTCTCTGTGA
Protein sequenceShow/hide protein sequence
MVSNGVRLELCFCPAAGGAEGCAITKPMVAVGLVKIFVMRDQVFAFPVIEIKVKQGYDLTPILEFVLLWHYLMEMILIQCSICKVTVPPKRDWKQMGHEGATVAV
HEEMKRVQRLPSNSTYATHRLKRTVSQEEELELLFAGLSL