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Clc11G20690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G20690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L35a-1-like
Genome locationClcChr11:30848442..30848732
RNA-Seq ExpressionClc11G20690
SyntenyClc11G20690
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]1.2e-1676.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKG QGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNTREEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

XP_011653915.1 60S ribosomal protein L35a-1 [Cucumis sativus]2.4e-1777.78Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNTREEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

XP_012850403.1 PREDICTED: 60S ribosomal protein L35a-3-like [Erythranthe guttata]1.5e-1676.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGERV+LY+RG VL YKRSKSNQYP TSLIQI GVNT+EEVAWY+GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]5.3e-1776.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNT+EEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]1.8e-1779.37Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGERV+LY+RG VL YKRSKSNQYPRTSLIQI GVNTREEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

TrEMBL top hitse value%identityAlignment
A0A022QFA1 Uncharacterized protein7.5e-1776.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGERV+LY+RG VL YKRSKSNQYP TSLIQI GVNT+EEVAWY+GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

A0A1S3B4N4 60S ribosomal protein L35a-1-like5.7e-1776.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKG QGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNTREEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

A0A5A7TGR3 60S ribosomal protein L35a-1-like5.7e-1776.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKG QGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNTREEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

A0A6J1HTF7 60S ribosomal protein L35a-1-like2.6e-1776.19Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGER++LY+RG VL YKRSKSNQYPRTSLIQI GVNT+EEVAWY GK LA+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

A0A6P6VP63 60S ribosomal protein L35a-1-like9.8e-1774.6Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK
        MVKGRQGERV+LY+RG VL YKRSKSNQYP TSLIQI GVNT+EEVAWY+GK +A+  ++K+K
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFT-RSKMK

SwissProt top hitse value%identityAlignment
P51422 60S ribosomal protein L35a-43.2e-1776.36Show/hide
Query:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        +KGRQGERV+LY+RG VL YKRSKSNQYP TSL+QI GVNT+EEV WY GK LA+
Subjt:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

Q55BN7 60S ribosomal protein L35a7.5e-0650Show/hide
Query:  KLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGK--CLAFTRSK
        K+Y +G+VL Y+RS++ QYP  SLI+I GV +RE+  +Y+GK  CL    SK
Subjt:  KLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGK--CLAFTRSK

Q9C912 60S ribosomal protein L35a-38.5e-1875Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        MVKGRQGERV+LY+RG +L YKRSKSNQYP TSL+QI GVNT+EEV WY GK +A+
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

Q9FZH0 60S ribosomal protein L35a-22.5e-1778.18Show/hide
Query:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        +KGRQGERV+LY+RG VL YKRSKSNQYP TSLIQI GVNT+EEV WY GK LA+
Subjt:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

Q9LMK0 60S ribosomal protein L35a-18.5e-1873.21Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        MVKGRQGERV+LY+RG +L YKRSKSNQYP TSL+Q+ GVNT EEV+WY GK +A+
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein6.0e-1973.21Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        MVKGRQGERV+LY+RG +L YKRSKSNQYP TSL+Q+ GVNT EEV+WY GK +A+
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

AT1G41880.1 Ribosomal protein L35Ae family protein1.8e-1878.18Show/hide
Query:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        +KGRQGERV+LY+RG VL YKRSKSNQYP TSLIQI GVNT+EEV WY GK LA+
Subjt:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

AT1G74270.1 Ribosomal protein L35Ae family protein6.0e-1975Show/hide
Query:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        MVKGRQGERV+LY+RG +L YKRSKSNQYP TSL+QI GVNT+EEV WY GK +A+
Subjt:  MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF

AT3G55750.1 Ribosomal protein L35Ae family protein2.3e-1876.36Show/hide
Query:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF
        +KGRQGERV+LY+RG VL YKRSKSNQYP TSL+QI GVNT+EEV WY GK LA+
Subjt:  VKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGGCAAGGAGAAAGAGTCAAACTCTACATTAGAGGAATGGTCCTTAGGTACAAGAGGTCAAAGTCAAACCAGTATCCAAGAACATCACTAATCCAAAT
TGGAGGGGTGAACACCAGGGAAGAGGTCGCATGGTACGTTGGAAAGTGCTTGGCGTTCACAAGAAGCAAAATGAAACTCACTACAGATGCATTTGGGGCAAGGTTTGCAA
GCTTCATGGTAACAGTGGCAATATTCGAGCTAAGTTCAAGTCAAACTTTTGCCCCCAAAGTCCATGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGGAAGGCAAGGAGAAAGAGTCAAACTCTACATTAGAGGAATGGTCCTTAGGTACAAGAGGTCAAAGTCAAACCAGTATCCAAGAACATCACTAATCCAAAT
TGGAGGGGTGAACACCAGGGAAGAGGTCGCATGGTACGTTGGAAAGTGCTTGGCGTTCACAAGAAGCAAAATGAAACTCACTACAGATGCATTTGGGGCAAGGTTTGCAA
GCTTCATGGTAACAGTGGCAATATTCGAGCTAAGTTCAAGTCAAACTTTTGCCCCCAAAGTCCATGGGTGA
Protein sequenceShow/hide protein sequence
MVKGRQGERVKLYIRGMVLRYKRSKSNQYPRTSLIQIGGVNTREEVAWYVGKCLAFTRSKMKLTTDAFGARFASFMVTVAIFELSSSQTFAPKVHG