; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G20710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G20710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUPF0047 protein like
Genome locationClcChr11:30863793..30866788
RNA-Seq ExpressionClc11G20710
SyntenyClc11G20710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001602 - Uncharacterised protein family UPF0047
IPR035917 - YjbQ-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591177.1 hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8291.98Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GA+LLA+QPLRVKL W +NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

XP_008453044.1 PREDICTED: UPF0047 protein YjbQ [Cucumis melo]3.0e-8091.98Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPSLMAAAGPKWAQKTVTL PHRRGCHLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DV+SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

XP_022936473.1 uncharacterized protein LOC111443082 [Cucurbita moschata]6.4e-8392.59Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GA+LLA+QPLRVKL WS+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

XP_022976235.1 uncharacterized protein LOC111476694 [Cucurbita maxima]2.7e-8191.98Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GA+LLA+QPLRVKL  S+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

XP_038897717.1 UPF0047 protein C4A8.02c [Benincasa hispida]5.4e-8293.21Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GAIL A+QPLR+KL W+SNSSTGN SATARSGN SLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

TrEMBL top hitse value%identityAlignment
A0A0A0L4Q6 Uncharacterized protein4.6e-7990.12Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPS MAAAGPKWAQKTVTL PHRRGCHLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DV++DTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGK NMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

A0A1S3BUP9 UPF0047 protein YjbQ1.4e-8091.98Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPSLMAAAGPKWAQKTVTL PHRRGCHLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DV+SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

A0A6J1DDZ9 uncharacterized protein LOC111019630 isoform X13.1e-7586.14Show/hide
Query:  MPGAILLA--SQPLRVKL--SWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTI
        M GA+LLA  +QP+RVKL  S + N+S+G+PSA+A SG PS MAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIGQDL+EFKCGLAHIFLQHTSASLTI
Subjt:  MPGAILLA--SQPLRVKL--SWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTI

Query:  NENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        NENYD DVRSDTETFLN+IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNG FNMGTWQ
Subjt:  NENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

A0A6J1FDC5 uncharacterized protein LOC1114430823.1e-8392.59Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GA+LLA+QPLRVKL WS+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

A0A6J1IIX0 uncharacterized protein LOC1114766941.3e-8191.98Show/hide
Query:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY
        M GA+LLA+QPLRVKL  S+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENY
Subjt:  MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENY

Query:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        D DVRSDTETFLN IVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Subjt:  DLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ

SwissProt top hitse value%identityAlignment
O14155 UPF0047 protein C4A8.02c7.2e-2952.17Show/hide
Query:  QKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL
        Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D D R+D    L+KIVPE  SA ++HT EG DDMPAH+KSS+ G +L
Subjt:  QKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCAL

Query:  TIPITNGKFNMGTWQ
        T+PITNGK ++GTWQ
Subjt:  TIPITNGKFNMGTWQ

P0A2L1 UPF0047 protein YjbQ3.1e-2447.86Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC
        W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR+D E    K VP+  +A ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNMGTWQ
        +L +P+  G+  +GTWQ
Subjt:  ALTIPITNGKFNMGTWQ

P0A2L2 UPF0047 protein YjbQ3.1e-2447.86Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC
        W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR+D E    K VP+  +A ++H  EG DDMP+HIKSS+ G 
Subjt:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNMGTWQ
        +L +P+  G+  +GTWQ
Subjt:  ALTIPITNGKFNMGTWQ

P0AF48 UPF0047 protein YjbQ3.3e-2648.72Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC
        W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR D E F  + VP+  +  ++H  EG DDMP+HIKSSM G 
Subjt:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNMGTWQ
        +L +P+  G+   GTWQ
Subjt:  ALTIPITNGKFNMGTWQ

P0AF49 UPF0047 protein YjbQ3.3e-2648.72Show/hide
Query:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC
        W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR D E F  + VP+  +  ++H  EG DDMP+HIKSSM G 
Subjt:  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGC

Query:  ALTIPITNGKFNMGTWQ
        +L +P+  G+   GTWQ
Subjt:  ALTIPITNGKFNMGTWQ

Arabidopsis top hitse value%identityAlignment
AT1G21065.1 unknown protein4.7e-6073.03Show/hide
Query:  PLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTET
        PLRV+    S  +  NP AT R+   S+ +++G KWAQKT+TLPP RRGCHLITPKI+KEI +DLS+F CGLAH+FLQHTSASLTINENYD DV++DTET
Subjt:  PLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTET

Query:  FLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
        FLN+IVPEG SAPW+HT+EGPDDMPAHIKSSMFGC LTIPIT GK +MGTWQ
Subjt:  FLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGCGCTATTCTCTTGGCTTCACAGCCACTCCGCGTAAAGTTGTCGTGGAGCAGCAATTCCAGTACTGGTAATCCGTCCGCAACCGCACGCTCTGGCAATCCAAG
CTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATAAAAGAAATTGGGCAAG
ACTTATCAGAATTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTTGGATGTTCGGAGTGATACTGAAACC
TTCCTCAACAAGATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGCACT
CACGATTCCAATAACAAATGGAAAGTTTAATATGGGTACTTGGCAGTTTGGAGTAGGAGTGGCTATCGAGGAGTTTTTTTTTTGGGAAGGAAAGAATGGTAGTAGTAAGA
TCAACCATTTGGTGCATTGGCAAGTAGTTTCCGATTCTCGTTCCCATGGTGGTCTCGGCATTGGTGCTTTGAAGCATAGGAATTTGGCTTTTCATGCTAAATGGGGTTGG
AGGTTTATGCAACAACCTCACTCCCTTTGGAGAAAGGTGATTATTAGTACTCATGGAAGAAGTTTGAATCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGCGCTATTCTCTTGGCTTCACAGCCACTCCGCGTAAAGTTGTCGTGGAGCAGCAATTCCAGTACTGGTAATCCGTCCGCAACCGCACGCTCTGGCAATCCAAG
CTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATAAAAGAAATTGGGCAAG
ACTTATCAGAATTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTTGGATGTTCGGAGTGATACTGAAACC
TTCCTCAACAAGATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGCACT
CACGATTCCAATAACAAATGGAAAGTTTAATATGGGTACTTGGCAGTTTGGAGTAGGAGTGGCTATCGAGGAGTTTTTTTTTTGGGAAGGAAAGAATGGTAGTAGTAAGA
TCAACCATTTGGTGCATTGGCAAGTAGTTTCCGATTCTCGTTCCCATGGTGGTCTCGGCATTGGTGCTTTGAAGCATAGGAATTTGGCTTTTCATGCTAAATGGGGTTGG
AGGTTTATGCAACAACCTCACTCCCTTTGGAGAAAGGTGATTATTAGTACTCATGGAAGAAGTTTGAATCGTTATTGA
Protein sequenceShow/hide protein sequence
MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTET
FLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQFGVGVAIEEFFFWEGKNGSSKINHLVHWQVVSDSRSHGGLGIGALKHRNLAFHAKWGW
RFMQQPHSLWRKVIISTHGRSLNRY