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CmUC01G005180 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G005180
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationCmU531Chr01:5193629..5194977
RNA-Seq ExpressionCmUC01G005180
SyntenyCmUC01G005180
Gene Ontology termsGO:0010150 - leaf senescence (biological process)
GO:0010506 - regulation of autophagy (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0072593 - reactive oxygen species metabolic process (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143713.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus]9.1e-3979.63Show/hide
Query:  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDN
        MASI+PIS+P SSLS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVDSVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDN
Subjt:  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

XP_008467263.1 PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo]2.0e-3377.06Show/hide
Query:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVVDSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]3.3e-3371.56Show/hide
Query:  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVVDSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]7.4e-3371.56Show/hide
Query:  MASIVPISAPSSLSIRTHPPHPNFN-----ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVVDSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAPSSLSIRTHPPHPNFN-----ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

XP_038876467.1 CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]2.2e-4082.24Show/hide
Query:  MASIVPISAPSSLSIRTHPPHPNF---NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNV
        MASIV IS PSSLSI + PPH NF     R  VVVRA+ GSGGEPINPAIRKTEDKVVDSVLI +LSKPLTPYCRCWRSATFP+CDGSHVKHNKATGDNV
Subjt:  MASIVPISAPSSLSIRTHPPHPNF---NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNV

Query:  GPLLLKK
        GPLLLK+
Subjt:  GPLLLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KL88 ZnF_CDGSH domain-containing protein4.4e-3979.63Show/hide
Query:  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDN
        MASI+PIS+P SSLS R H    NFN    RR VVVRAEGGS GE INPAIRK+EDKVVDSVL+ +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGDN
Subjt:  MASIVPISAP-SSLSIRTHPPHPNFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A1S3CTC1 CDGSH iron-sulfur domain-containing protein NEET9.5e-3477.06Show/hide
Query:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVVDSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET9.5e-3477.06Show/hide
Query:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MASIV IS+P SSLS R     P +FN    RR VVVRAE GS GE INPAIRK+E+KVVDSVLI +LSKPLTPYCRCWRS TFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAP-SSLSIRTHPPHP-NFN---ARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET1.2e-3167.54Show/hide
Query:  MASIVPISAPSSLSI-RTHPPHPNF---------NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHN
        MASI+   A S  SI  TH  H N            RR+ VVRAE  +G EPINPAIRK+EDKVVDSVL+  L+KPLT YCRCWRSATFP+CDGSHVKHN
Subjt:  MASIVPISAPSSLSI-RTHPPHPNF---------NARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHN

Query:  KATGDNVGPLLLKK
        KATGDNVGPLLLKK
Subjt:  KATGDNVGPLLLKK

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET1.6e-3371.56Show/hide
Query:  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD
        MAS+   SA  +    T PPH NF       RRMVVVRAE   GGE INPAIRK+EDKVVDSV++  L+KPLTPYCRCWRSATFP+CDGSHVKHNKATGD
Subjt:  MASIVPISAPSSLSIRTHPPHPNFNA-----RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

SwissProt top hitse value%identityAlignment
C1BI29 CDGSH iron-sulfur domain-containing protein 2A5.9e-1759.68Show/hide
Query:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I+ L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B5.9e-1761.29Show/hide
Query:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A5.9e-1761.29Show/hide
Query:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I+ L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Q7T326 CDGSH iron-sulfur domain-containing protein 22.7e-1761.29Show/hide
Query:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I+ L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET4.2e-3179.49Show/hide
Query:  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding3.0e-3279.49Show/hide
Query:  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK
        +RMVVVRAEGG G   INP IRK EDKVVDSV++ +LSK +TPYCRCWRS TFP+CDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATFPICDGSHVKHNKATGDNVGPLLLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACC
CATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCA
TAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTT
CCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTCAAAAGGCGTATGCTCTCCACACGTTCATCACCCATTATTTCAGTACTTCACCACACCAACACATCTCTGCAAATCATTGCACAATGGCGTCCATTGTACC
CATTTCTGCACCTTCTTCCTTATCAATAAGAACCCATCCTCCTCATCCTAATTTCAACGCCCGTCGTATGGTGGTTGTAAGAGCTGAAGGCGGCAGCGGCGGCGAACCCA
TAAACCCTGCAATCAGGAAGACAGAAGACAAAGTGGTGGACTCTGTCCTCATCGATCAACTTTCCAAGCCCCTCACTCCTTATTGCCGATGTTGGAGGTCAGCCACATTT
CCTATTTGTGATGGAAGCCATGTTAAGCACAACAAGGCAACTGGGGATAATGTTGGTCCTTTGCTCTTAAAGAAGTAG
Protein sequenceShow/hide protein sequence
MELQKAYALHTFITHYFSTSPHQHISANHCTMASIVPISAPSSLSIRTHPPHPNFNARRMVVVRAEGGSGGEPINPAIRKTEDKVVDSVLIDQLSKPLTPYCRCWRSATF
PICDGSHVKHNKATGDNVGPLLLKK