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CmUC01G006010 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G006010
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionextensin-like
Genome locationCmU531Chr01:6373966..6374403
RNA-Seq ExpressionCmUC01G006010
SyntenyCmUC01G006010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601837.1 hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4173.1Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        +FMYITGPPGDLYPID++YNAA RR  +AAASAV+GL + G+L++
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

KAG7032543.1 hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-4273.79Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        +FMYITGPPGDLYPID++YNAA RR  +AAASAV+GL +AG+L++
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

XP_004150475.1 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]3.2e-5082.76Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLPL FLLFLNFLLLISPSS   +   R LDDT   TTP DP VKCAPCEQN PSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        SFMYITGPPGDLYPID+ YNAAGRRS    A+ V+G+VLAGLLLV
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]1.3e-5184.14Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLPL FLLFLNFLLLISPSS   +A  R LDDT   TTP DP VKCAPCEQN PSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        SFMYITGPPGDLYPID+NYNAAGRRS AAAA   +G+VLAGLLLV
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

XP_022989990.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.6e-4476.55Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP N LLFL  LLLISPSS+SAA   R LDDT +  TPADPTVKC+PCEQN PSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        +FMYITGPPGDLYPID+NYNAA RR  +AAASAVIGL +AG+L++
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein1.6e-5082.76Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLPL FLLFLNFLLLISPSS   +   R LDDT   TTP DP VKCAPCEQN PSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        SFMYITGPPGDLYPID+ YNAAGRRS    A+ V+G+VLAGLLLV
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

A0A1S3CT22 extensin-like6.3e-5284.14Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLPL FLLFLNFLLLISPSS   +A  R LDDT   TTP DP VKCAPCEQN PSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        SFMYITGPPGDLYPID+NYNAAGRRS AAAA   +G+VLAGLLLV
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

A0A6J1DDL2 acrosin2.5e-4071.62Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAA-APARLLDDT-TIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPP
        MLPL  LLFLN LLLISPS+T+AA A AR LD+   +P+T  DPTVKCAPC+QN PSPPPP +YPSPPPPSPPPPDV+PYYSPPPPKK +  + NCPPPP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAA-APARLLDDT-TIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPP

Query:  -SPSFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
          PSF YITGPPGDLYPID++YNAA R  T+AAA+AV+GL L GL +V
Subjt:  -SPSFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

A0A6J1GMY1 extensin1.0e-4173.1Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP N LLFL  LLLISPSS+SAA   R LDD     TPADPTVKC+PCEQN PSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        +FMYITGPPGDLYPID++YNAA RR  + AASAV+GL +AG+L++
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

A0A6J1JNW0 leucine-rich repeat extensin-like protein 31.3e-4476.55Show/hide
Query:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP
        MLP N LLFL  LLLISPSS+SAA   R LDDT +  TPADPTVKC+PCEQN PSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPPSP
Subjt:  MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSP

Query:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV
        +FMYITGPPGDLYPID+NYNAA RR  +AAASAVIGL +AG+L++
Subjt:  SFMYITGPPGDLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein5.6e-0848.65Show/hide
Query:  ADPTVKCAPCEQNQPSPPPPVVYPSPPP----PSPPPPDVVPYYSPPPPKKKE-PKSPNCPPPPSPSFMYI-TGPPGDLYPIDRNYNAAGRRSTAAAASA
        A+  V C PC QNQP PP     PSPPP    PSPPPP      SPPPPKK   P SP  PPPP P   Y+ T PPGDLYPI+  Y AA     A  + +
Subjt:  ADPTVKCAPCEQNQPSPPPPVVYPSPPP----PSPPPPDVVPYYSPPPPKKKE-PKSPNCPPPPSPSFMYI-TGPPGDLYPIDRNYNAAGRRSTAAAASA

Query:  VIGLVLAGLLL
        V+ L + G+++
Subjt:  VIGLVLAGLLL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein1.1e-1145.8Show/hide
Query:  LLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAP-CEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDL
        L+   SS+ A+  AR LD+        DP +KC+P C QN P P PP   PSPPPP+ PPP  +P   PPPPKK    S  CPPPP  +F+YITGPPG+L
Subjt:  LLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAP-CEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDL

Query:  YPIDRNYNAAGRRSTAAAASAVIGLVLAGLL
        YP+D  + AA  +S       + GL+  G++
Subjt:  YPIDRNYNAAGRRSTAAAASAVIGLVLAGLL

AT1G70990.1 proline-rich family protein1.7e-0939.86Show/hide
Query:  LNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM
        L  ++FL F ++I+ S           D +T      DP +KC PC QN P        PSPPPPSPPPP       PPP     PK   CPPPPS +++
Subjt:  LNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFM

Query:  YITGPPGDLYPIDRNYNAAGRRS-TAAAASAVIGLVLAGLLLV
        Y+TGPPG+LYPID+ + AA  +S T    S +I   +   L++
Subjt:  YITGPPGDLYPIDRNYNAAGRRS-TAAAASAVIGLVLAGLLLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAATTTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCACCTCCGCCGCCGCCCCCGCCCGCCTCCTCGACGACACCACCATCCCGAC
CACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGTGAACAGAACCAGCCATCTCCTCCGCCGCCGGTAGTCTACCCATCGCCCCCGCCGCCGTCTCCTCCGCCGCCCG
ATGTCGTTCCCTACTACTCTCCCCCACCCCCGAAGAAGAAGGAGCCCAAGAGCCCCAACTGCCCTCCGCCGCCGTCTCCCTCGTTCATGTACATAACCGGCCCTCCCGGC
GACCTTTATCCGATCGACCGGAATTATAACGCCGCCGGCCGGAGATCCACCGCCGCCGCGGCCTCCGCCGTGATTGGGCTTGTTCTAGCCGGACTTCTGTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTCTCAATTTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCACCTCCGCCGCCGCCCCCGCCCGCCTCCTCGACGACACCACCATCCCGAC
CACCCCCGCCGACCCCACCGTCAAGTGCGCCCCATGTGAACAGAACCAGCCATCTCCTCCGCCGCCGGTAGTCTACCCATCGCCCCCGCCGCCGTCTCCTCCGCCGCCCG
ATGTCGTTCCCTACTACTCTCCCCCACCCCCGAAGAAGAAGGAGCCCAAGAGCCCCAACTGCCCTCCGCCGCCGTCTCCCTCGTTCATGTACATAACCGGCCCTCCCGGC
GACCTTTATCCGATCGACCGGAATTATAACGCCGCCGGCCGGAGATCCACCGCCGCCGCGGCCTCCGCCGTGATTGGGCTTGTTCTAGCCGGACTTCTGTTGGTTTAA
Protein sequenceShow/hide protein sequence
MLPLNFLLFLNFLLLISPSSTSAAAPARLLDDTTIPTTPADPTVKCAPCEQNQPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPG
DLYPIDRNYNAAGRRSTAAAASAVIGLVLAGLLLV