| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0065687.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.8e-24 | 57.43 | Show/hide |
Query: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
++RE+FFTFKMD +SL ENL EFKK+ +FK LG+K+GD+NE+++LLNSLPEAY+EVK AL+Y R+ ITTG +ISA++ EL+L++ +++Q + E LF
Subjt: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
Query: K
K
Subjt: K
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| XP_038875093.1 uncharacterized protein LOC120067620 [Benincasa hispida] | 2.0e-23 | 52.94 | Show/hide |
Query: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
FLRE+FFT+KM +A+SLT+NL+E K++ EF+S+ + +G++NEA++LLNSL E++++VK A+KY RE ITT AIISA+K+ ELEL +KK+Q + LF
Subjt: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
Query: KSKDKPNQSKGGKQQSNED
K K+K N G +Q+N D
Subjt: KSKDKPNQSKGGKQQSNED
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| XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida] | 1.2e-31 | 48.31 | Show/hide |
Query: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
FLRE+FFT+KMD A+SLT+NL+EFK + +F+S+G+ +G++NEA++LLNSLPE +++VK ALKY RE ITT AIISA+ + ELEL TKK+QP E F
Subjt: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
Query: KSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDCYSLKRKNQEKEKDAKGKQPKASIVEGSYFYSDALAST
K + K + ++ IR + +K DCY+LKRK ++ K GKQ +A++ E S YSDALA+T
Subjt: KSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDCYSLKRKNQEKEKDAKGKQPKASIVEGSYFYSDALAST
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| XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida] | 3.1e-24 | 56.76 | Show/hide |
Query: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
FLRE+FFT+KMD+A+SLT+ L+EFK++ EF+S+G +G++NEA++LLNSLPE++++ K A+KY RE ITT AIISA+++ ELEL +KK Q E LF
Subjt: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
Query: KSKDKPNQSKG
K K+K N KG
Subjt: KSKDKPNQSKG
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| XP_038896323.1 uncharacterized protein LOC120084587 [Benincasa hispida] | 1.1e-24 | 56.91 | Show/hide |
Query: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
M+L EKFFTFKMDS+++LT N DEFKKIV EFK+LGEKL D NEAYVL NSLPE+Y+E+KNALKY R+S +T IISAL+ ELEL +K P+ E +
Subjt: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
Query: VKSKDKPNQSKGGKQQSNEDHKL
+ + + KGG + +D K+
Subjt: VKSKDKPNQSKGGKQQSNEDHKL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UB25 Putative gag-pol polyprotein | 2.0e-05 | 45.76 | Show/hide |
Query: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTKLVLKLKLLKCLELIN
NP +H R+KHID+K+H++R+ I +VE++KVHT EN++DMLTK + + L+ +N
Subjt: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTKLVLKLKLLKCLELIN
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| A0A5A7UB25 Putative gag-pol polyprotein | 3.8e-20 | 38.55 | Show/hide |
Query: REKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFVKS
+EKFF +KMD ++SL ENLDEF+KI+++ ++GEK+ D+N+A +LLNSLPE Y EVK A+KY R+S+T ++ ALK LE+ KKE+ E L +
Subjt: REKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFVKS
Query: KDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEGSYFYSDALASTRD
+ + KG ++ S K K K R + KGH ++C + R+ E + A I +G + S RD
Subjt: KDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEGSYFYSDALASTRD
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| A0A5D3CAI4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.7e-25 | 57.43 | Show/hide |
Query: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
++RE+FFTFKMD +SL ENL EFKK+ +FK LG+K+GD+NE+++LLNSLPEAY+EVK AL+Y R+ ITTG +ISA++ EL+L++ +++Q + E LF
Subjt: FLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLFV
Query: K
K
Subjt: K
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| A0A5D3CG50 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.8e-21 | 42.25 | Show/hide |
Query: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
++++EKFF +KMD ++SL ENLDEF+KI+++ ++GEK+ D+N+A +LLNSLPE Y EVK A+KY R+S+ ++ ALK LE+ KKE E L
Subjt: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
Query: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC
+ + + KG ++ S K K++ +C K+GHL ++C
Subjt: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC
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| A0A5D3DNU1 Putative gag-pol polyprotein | 9.9e-21 | 38.46 | Show/hide |
Query: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
++++EKFF +KMD ++SL ENLDEF+KIV++ ++GEK+ D+N+A +LLNSLPE Y EVK A+KY R+S+T ++ ALK LE+ KKE+ E L
Subjt: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
Query: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEG
+ + + KG ++ K K++ +C K+GH ++C + R+ E + A I +G
Subjt: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEG
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| A0A5D3DNU1 Putative gag-pol polyprotein | 5.3e-06 | 56.82 | Show/hide |
Query: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
NP +H R+KHID+K+H++R+ I +VE++KVHT EN++DMLTK
Subjt: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
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| A0A5D3DNU1 Putative gag-pol polyprotein | 9.9e-21 | 38.46 | Show/hide |
Query: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
++++EKFF +KMD ++SL ENLDEF+KIV++ ++GEK+ D+N+A +LLNSLPE Y EVK A+KY R+S+T ++ ALK LE+ KKE+ E L
Subjt: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
Query: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEG
+ + + KG ++ K K++ +C K+GH ++C + R+ E + A I +G
Subjt: VKSKDKPNQSKGGKQQSNEDHKLKTKIRCNYRKKKGHLMRDC-YSLKRKNQEKEKDAKGKQPKASIVEG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.2e-04 | 43.18 | Show/hide |
Query: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
NP H R KHIDIKYHF R++++ + + + T +AD+ TK
Subjt: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
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| P04146 Copia protein | 3.1e-03 | 22.89 | Show/hide |
Query: LREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALK-YDRESITTGAIISALKINELELHATKKE-QPSVERLF
LR++ + K+ S SL + F +++ E + G K+ + ++ LL +LP Y+ + A++ E++T + + L E+++ + V
Subjt: LREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALK-YDRESITTGAIISALKINELELHATKKE-QPSVERLF
Query: VKSKDKPNQSKGGKQQSNEDHKL-----KTKIRCNYRKKKGHLMRDCYSLKR----KNQEKEKDAK
V + + ++ K + + K+ K K++C++ ++GH+ +DC+ KR KN+E EK +
Subjt: VKSKDKPNQSKGGKQQSNEDHKL-----KTKIRCNYRKKKGHLMRDCYSLKR----KNQEKEKDAK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-09 | 50 | Show/hide |
Query: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTKLVLKLKLLKCLELI
N YH RTKHID++YH++R+ ++ ++VLK+ T+EN ADMLTK+V + K C EL+
Subjt: NPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTKLVLKLKLLKCLELI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-05 | 21.91 | Show/hide |
Query: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
++L+++ + M + +L+ F ++ + +LG K+ ++++A +LLNSLP +Y+ + + + + +I + SAL +NE KK + + L
Subjt: MFLREKFFTFKMDSARSLTENLDEFKKIVIEFKSLGEKLGDDNEAYVLLNSLPEAYEEVKNALKYDRESITTGAIISALKINELELHATKKEQPSVERLF
Query: VKSKDKPNQSKG---------GKQQSNEDHKLKTKIRCNYRKKKGHLMRDCYSLKRKNQEKEKDAKGKQPKASIVEGS
+ + + Q GK ++ +++ CN + GH RDC + RK + + K A++V+ +
Subjt: VKSKDKPNQSKG---------GKQQSNEDHKLKTKIRCNYRKKKGHLMRDCYSLKRKNQEKEKDAKGKQPKASIVEGS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-05 | 43.75 | Show/hide |
Query: FFLINPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
+ NP +H+R KHI I YHF+R++++ G + V+ V T + +AD LTK
Subjt: FFLINPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-05 | 41.67 | Show/hide |
Query: FFLINPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
+ NP +H+R KHI + YHF+R++++ G + V+ V T + +AD LTK
Subjt: FFLINPQYHTRTKHIDIKYHFVRDKIEGGEVEVLKVHTSENVADMLTK
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