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CmUC01G012400 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G012400
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTransport and Golgi organization 2-like protein
Genome locationCmU531Chr01:24736193..24741430
RNA-Seq ExpressionCmUC01G012400
SyntenyCmUC01G012400
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052070.1 transport and Golgi organization 2-like protein [Cucumis melo var. makuwa]4.6e-1264.91Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQLR + EGEIP+K ++ERLMRD VKADE KLPHI SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

KAF3973804.1 hypothetical protein CMV_002802 [Castanea mollissima]6.2e-0955.93Show/hide
Query:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        P + AQ L L F E+L    +GEIP K ++E+LMRD VKADE KLPHICS D++ +LS+
Subjt:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

XP_008462211.1 PREDICTED: transport and Golgi organization 2 homolog [Cucumis melo]4.6e-1264.91Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQLR + EGEIP+K ++ERLMRD VKADE KLPHI SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

XP_011654181.1 transport and Golgi organization 2 homolog [Cucumis sativus]1.9e-1063.16Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQL  +AEGEIP+K ++ERLMRD VKADE KLP I SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

XP_022153121.1 transport and Golgi organization 2 homolog [Momordica charantia]3.0e-1167.24Show/hide
Query:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLS
        P + AQ LRLKFNEQL     GEIP K +IERLMRD VKADE KLPHICS D++  LS
Subjt:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLS

TrEMBL top hitse value%identityAlignment
A0A0A0LSJ0 Sterile domain-containing protein9.3e-1163.16Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQL  +AEGEIP+K ++ERLMRD VKADE KLP I SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

A0A1S3CGF4 transport and Golgi organization 2 homolog2.2e-1264.91Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQLR + EGEIP+K ++ERLMRD VKADE KLPHI SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

A0A5A7UA61 Transport and Golgi organization 2-like protein2.2e-1264.91Show/hide
Query:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        +  Q LRLKFNEQLR + EGEIP+K ++ERLMRD VKADE KLPHI SPD++ + S+
Subjt:  YMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

A0A5N6RBW6 Uncharacterized protein3.0e-0955.93Show/hide
Query:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN
        P + AQ LRL F EQL  + +GE+P K + E+LMRD VKADE KLP ICS D++ +LS+
Subjt:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLSN

A0A6J1DFX0 transport and Golgi organization 2 homolog1.4e-1167.24Show/hide
Query:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLS
        P + AQ LRLKFNEQL     GEIP K +IERLMRD VKADE KLPHICS D++  LS
Subjt:  PTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAAAGCAGACGAGAGGGGACGTTGAAGCCCTCTCTTGCCGCTCTAACAGCGGGAATGGTGGCTTTTACTGCCGTCGATTGCTTGGTAGGTGGTATCGTT
ACACTGGATTTGGGCTTTGGTAGGGGAGGGCTCCTTCCAACTTATATGGCGCAACACTTGAGGCTAAAATTTAATGAACAGCTTCGTGCATTTGCCGAAGGTGAA
ATACCTAAGAAAGGGTTGATTGAGAGGTTAATGAGGGACGTCGTTAAAGCTGATGAAGGCAAACTTCCTCATATATGCTCCCCTGACTTCGACCCGTCTTTGTCC
AATTTCACACCCTTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAAAGCAGACGAGAGGGGACGTTGAAGCCCTCTCTTGCCGCTCTAACAGCGGGAATGGTGGCTTTTACTGCCGTCGATTGCTTGGTAGGTGGTATCGTT
ACACTGGATTTGGGCTTTGGTAGGGGAGGGCTCCTTCCAACTTATATGGCGCAACACTTGAGGCTAAAATTTAATGAACAGCTTCGTGCATTTGCCGAAGGTGAA
ATACCTAAGAAAGGGTTGATTGAGAGGTTAATGAGGGACGTCGTTAAAGCTGATGAAGGCAAACTTCCTCATATATGCTCCCCTGACTTCGACCCGTCTTTGTCC
AATTTCACACCCTTCTGGTAA
Protein sequenceShow/hide protein sequence
MLQSRREGTLKPSLAALTAGMVAFTAVDCLVGGIVTLDLGFGRGGLLPTYMAQHLRLKFNEQLRAFAEGEIPKKGLIERLMRDVVKADEGKLPHICSPDFDPSLS
NFTPFW