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CmUC01G015960 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G015960
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptiontRNA Delta(2)-isopentenylpyrophosphate transferase, putative
Genome locationCmU531Chr01:29562164..29562621
RNA-Seq ExpressionCmUC01G015960
SyntenyCmUC01G015960
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF39992.1 conserved hypothetical protein [Ricinus communis]5.0e-0946.67Show/hide
Query:  GVCVMIIVLVLCLSHESVY-VECRHLKATRCKKCSKLISAPPRV----HQKSAG---NGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        G C  ++VL+LC  HE++Y VE RHLK   CKKCS+   +   V    H  +     NG Q   +K +   DFRPT+PGHSPGVGH I N
Subjt:  GVCVMIIVLVLCLSHESVY-VECRHLKATRCKKCSKLISAPPRV----HQKSAG---NGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

EOX91365.1 TRNA Delta(2)-isopentenylpyrophosphate transferase, putative [Theobroma cacao]2.7e-1047.25Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        R+  VCV+++VL+LC       VE RHL++  CKKCS+       +         S G+GQ+  T+KAE   DFRPTSPGHSPGVGH I N
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

KAE8647497.1 hypothetical protein Csa_004238, partial [Cucumis sativus]4.0e-3076.84Show/hide
Query:  MMNRGGRVCGVCVMIIVLVLCLSHESVYVECRHLKATR-CKKCSKLISA---PPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        MM R GR CGVC+ IIVLVLCLS+E VYVECRHLK++R CKKCSK I     PP  H KSAGN QQF T KAELPQDFRPTSPGHSPGVGHHINN
Subjt:  MMNRGGRVCGVCVMIIVLVLCLSHESVYVECRHLKATR-CKKCSKLISA---PPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

KAG6595044.1 hypothetical protein SDJN03_11597, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2466.32Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSKLISAPPRVH---QKS-------AGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        R+ GVCV I+ L+LCLSHE VYVECRHLK++RCKKC+K I+ PP V+   +K+       AGN Q+F T+KAE PQDFRPTSPGHSPGVGHHINN
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSKLISAPPRVH---QKS-------AGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

OMP02045.1 hypothetical protein COLO4_11385 [Corchorus olitorius]6.6e-0945.05Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        RV   CV ++VL+LC     + VE RHL++  C+KCS+      L +A    H   +G   Q  +NK +   DFRPT+PGHSPGVGH INN
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

TrEMBL top hitse value%identityAlignment
A0A061DGB8 tRNA Delta(2)-isopentenylpyrophosphate transferase, putative1.3e-1047.25Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        R+  VCV+++VL+LC       VE RHL++  CKKCS+       +         S G+GQ+  T+KAE   DFRPTSPGHSPGVGH I N
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

A0A0A0KGB6 Uncharacterized protein3.6e-2171.79Show/hide
Query:  LVLCLSHESVYVECRHLKATR-CKKCSKLISA---PPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        +V  + +E VYVECRHLK++R CKKCSK I     PP  H KSAGN QQF T KAELPQDFRPTSPGHSPGVGHHINN
Subjt:  LVLCLSHESVYVECRHLKATR-CKKCSKLISA---PPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

A0A1R3K4N2 Uncharacterized protein3.2e-0945.05Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        RV   CV ++VL+LC     + VE RHL++  C+KCS+      L +A    H   +G   Q  +NK +   DFRPT+PGHSPGVGH INN
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSK------LISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

A0A2C9URG2 Uncharacterized protein4.2e-0947.73Show/hide
Query:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATR-CKKCSKLISAPPRVHQKSAGN--GQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        RV G C+ ++VL+LC  HE + VE RHLK  + CKKC +L         +      G Q  T+K +   DFRPT PGHSPGVGH INN
Subjt:  RVCGVCVMIIVLVLCLSHESVYVECRHLKATR-CKKCSKLISAPPRVHQKSAGN--GQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

B9S8I9 Uncharacterized protein2.4e-0946.67Show/hide
Query:  GVCVMIIVLVLCLSHESVY-VECRHLKATRCKKCSKLISAPPRV----HQKSAG---NGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN
        G C  ++VL+LC  HE++Y VE RHLK   CKKCS+   +   V    H  +     NG Q   +K +   DFRPT+PGHSPGVGH I N
Subjt:  GVCVMIIVLVLCLSHESVY-VECRHLKATRCKKCSKLISAPPRV----HQKSAG---NGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN

SwissProt top hitse value%identityAlignment
P0DN97 Precursor of CEP83.9e-0429.27Show/hide
Query:  CVMIIVLVLCLSHESVYVECRHLKATRCKKCSKLISAPPRVHQKSAGNGQQFMTNKAELPQ------DFRPTSPGHSPGVGH
        C+ ++++ + +SHE +  E RHL+  R      + ++   VH+ + G      + K ++ +      +FRPT+PG+SPG+GH
Subjt:  CVMIIVLVLCLSHESVYVECRHLKATRCKKCSKLISAPPRVHQKSAGNGQQFMTNKAELPQ------DFRPTSPGHSPGVGH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATAGAGGTGGTAGGGTTTGTGGGGTTTGTGTTATGATTATTGTTTTGGTTTTATGTTTAAGCCATGAGAGTGTTTACGTAGAATGCCGGCATCTGAAGGCCAC
AAGATGCAAGAAATGCTCCAAATTGATTAGTGCTCCACCGCGGGTTCATCAGAAGTCCGCCGGGAATGGTCAACAATTTATGACGAACAAAGCAGAATTACCTCAAGATT
TTCGTCCCACATCGCCTGGCCATAGTCCTGGAGTTGGCCACCATATCAACAACTGA
mRNA sequenceShow/hide mRNA sequence
CATATATATATAGAACCTTAGGCACAAAGCTTATTCAGTACACTCAAATTAGATATCTCCTTCCAACTTTAAGAAAGAAAAATTCTCTCTTTCTTTCTCTTTTATTTTCC
TCTCTGAATATAAAATATAAATGATGAATAGAGGTGGTAGGGTTTGTGGGGTTTGTGTTATGATTATTGTTTTGGTTTTATGTTTAAGCCATGAGAGTGTTTACGTAGAA
TGCCGGCATCTGAAGGCCACAAGATGCAAGAAATGCTCCAAATTGATTAGTGCTCCACCGCGGGTTCATCAGAAGTCCGCCGGGAATGGTCAACAATTTATGACGAACAA
AGCAGAATTACCTCAAGATTTTCGTCCCACATCGCCTGGCCATAGTCCTGGAGTTGGCCACCATATCAACAACTGAAACTCTTTTTACATTATCATGCATTTCATTGTAT
TCTCTCTCTCTCTCTCCC
Protein sequenceShow/hide protein sequence
MMNRGGRVCGVCVMIIVLVLCLSHESVYVECRHLKATRCKKCSKLISAPPRVHQKSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN