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CmUC01G016530 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G016530
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLate embryogenesis abundant protein
Genome locationCmU531Chr01:30171649..30171918
RNA-Seq ExpressionCmUC01G016530
SyntenyCmUC01G016530
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12837.1 Late embryogenesis abundant protein, LEA-18 [Cucumis melo var. makuwa]2.1e-3186.67Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KR+ADQ Q Q EE KSEREKERSEG+PL+SSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_016899224.1 PREDICTED: uncharacterized protein LOC107990449 [Cucumis melo]1.4e-3288.89Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KREADQ Q Q EERKSEREKERSEG+PL+SSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]7.3e-2983.33Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKSE ++ER EGIPL++SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]3.0e-3085.39Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKS  E+ER EGIPL++SPYVNYKDLEDYKNQAYG QGHL+PKP RGGGGG TDAPTLSGDAV SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]4.4e-3491.01Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKRE DQ QRQQEERKS RE+ERSEGIPL+SSPYVNYKDLEDYK+QAYGTQGHLQPKPGRG GGGPTDAPTLSGDA ASSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein5.7e-2786.42Show/hide
Query:  MDKREADQPQRQQEE-RKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS
        M+KREADQ Q Q +E RKSEREKERSE IPL+SSPYVNY+DLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDA A+
Subjt:  MDKREADQPQRQQEE-RKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS

A0A1S4DTA9 uncharacterized protein LOC1079904496.9e-3388.89Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KREADQ Q Q EERKSEREKERSEG+PL+SSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-181.0e-3186.67Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KR+ADQ Q Q EE KSEREKERSEG+PL+SSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630781.0e-2883.15Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKS  E+ER EGIPL++SPYVNYKDLEDYKNQAYG QGHL+ KP R GGGG TDAPTLSGDAV SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968243.5e-2983.33Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKSE ++ER EGIPL++SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 61.2e-0838.71Show/hide
Query:  QPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP
        + Q++    + E ++ +++ +    +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQGVP
Subjt:  QPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 61.2e-0838.71Show/hide
Query:  QPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP
        + Q++    + E ++ +++ +    +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQGVP
Subjt:  QPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 69.9e-0850.75Show/hide
Query:  ERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS
        E+K+E+ K+    +P   SPY+    LEDYK +AYG +GH +P PG GGG   TDAPT SGDA A++
Subjt:  ERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS

AT2G33690.1 Late embryogenesis abundant protein, group 67.8e-1354.84Show/hide
Query:  EKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV
        + E  + +PL++SPY  Y+D+EDYK  AYGT GH   KPG   GGG TDAPT SGDA  S++
Subjt:  EKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGAGGCCGATCAGCCGCAGCGGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAAGGCATTCCGTTGCAGAGCAGTCCGTACGTGAA
TTATAAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACTCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCCCCCACTCTCT
CCGGTGACGCCGTCGCTTCCTCGGTGATTAACCGCCAAGGAGTACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCGCGAGGCCGATCAGCCGCAGCGGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAAGGCATTCCGTTGCAGAGCAGTCCGTACGTGAA
TTATAAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACTCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCCCCCACTCTCT
CCGGTGACGCCGTCGCTTCCTCGGTGATTAACCGCCAAGGAGTACCCTGA
Protein sequenceShow/hide protein sequence
MDKREADQPQRQQEERKSEREKERSEGIPLQSSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP