; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC01G022720 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G022720
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCmU531Chr01:34621360..34624464
RNA-Seq ExpressionCmUC01G022720
SyntenyCmUC01G022720
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034608.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3894.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

XP_022926140.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]1.9e-3891.09Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG  G 
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG

Query:  V
        +
Subjt:  V

XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]3.2e-3894.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

XP_022926145.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita moschata]3.2e-3894.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

XP_022978782.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]1.9e-3891.09Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG  G 
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein4.6e-5167.91Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG
        MSSAAAMAARSAFRSTLARAPIS R T+ AK KS  SPFAIPKQNPLSQSHRILRSPVELSCC+ESLLPYHSATASALLTSMLSVSRRSYGWT E     
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG

Query:  VYTLGVFKMWLSAMFIENLKEQIYPQDLHLDFFIGDVELIIDHNNE------------SVCAIAMMMYDEYRMVRALALKRQDAEIK
                                 ++L+LD FIGDVELII+H NE            S   IAMMMYDEYRMVRALALKRQDAEIK
Subjt:  VYTLGVFKMWLSAMFIENLKEQIYPQDLHLDFFIGDVELIIDHNNE------------SVCAIAMMMYDEYRMVRALALKRQDAEIK

A0A6J1EK64 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X19.0e-3991.09Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG  G 
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG

Query:  V
        +
Subjt:  V

A0A6J1IM12 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X19.0e-3991.09Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG  G 
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGG

Query:  V
        +
Subjt:  V

A0A6J1IM18 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X51.5e-3894.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.5e-3894.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF+IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial2.9e-1047.37Show/hide
Query:  SSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPF-AIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE
        +SA    ARS  R+  +R+  ++     ++ KS    F A  +++PL      LR+PVELS CVESLLPYHSATASAL+TS LS+S ++YGW S+
Subjt:  SSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPF-AIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein5.6e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

AT1G28395.2 unknown protein5.6e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

AT1G28395.3 unknown protein5.6e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG

AT2G33847.1 unknown protein1.7e-1862.79Show/hide
Query:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS FRS + RA ++A  +      S  S F +PKQ+PL  SHRI RSPVELSCCVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWT

AT2G33847.2 unknown protein3.5e-1961.8Show/hide
Query:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG
        AARS FRS + RA ++A  +      S  S F +PKQ+PL  SHRI RSPVELSCCVE++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCTCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATC
TCCTTTCGCCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTTCTGAAGGTGGGGGTGGGGGGGTTTATACTTTAGGTGTGTTCAAAATGTGG
CTGAGTGCAATGTTCATTGAGAATTTGAAAGAACAAATTTACCCTCAAGATCTCCATCTTGATTTTTTCATTGGGGATGTTGAATTAATAATAGACCATAATAATGAGTC
AGTTTGTGCAATTGCAATGATGATGTATGATGAATATCGGATGGTTCGAGCACTTGCCCTCAAAAGACAAGATGCCGAAATAAAGTCATGTATTGCTTGTTTTTCGTGTG
CAAGTAGTTCAGTGACATTGGATTTTTATAGCATTAAAATCCTTGAGTTATCCCTACTATTCTTGAATGATGAATGCTACTACTGA
mRNA sequenceShow/hide mRNA sequence
TATGATCTCCAAGGTTGTGAAGTATGTTAGTACGGTACAATCGCATACACAGGAATACCTAACACTAAAGCAAAGGGCTAAAACCTTAAGAAAACCCCACGAAGAGATTT
CCAAATTCCTTTGCCAAATCCCTGAATCATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCTCCTATCTCCGCCAGACTTACCA
ACGGTGCCAAAGTCAAATCACCCTCATCTCCTTTCGCCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTG
GAATCGTTGCTTCCTTACCACTCTGCTACTGCCTCTGCATTGCTTACTTCTATGCTTTCCGTCTCTCGTCGAAGCTACGGTTGGACTTCTGAAGGTGGGGGTGGGGGGGT
TTATACTTTAGGTGTGTTCAAAATGTGGCTGAGTGCAATGTTCATTGAGAATTTGAAAGAACAAATTTACCCTCAAGATCTCCATCTTGATTTTTTCATTGGGGATGTTG
AATTAATAATAGACCATAATAATGAGTCAGTTTGTGCAATTGCAATGATGATGTATGATGAATATCGGATGGTTCGAGCACTTGCCCTCAAAAGACAAGATGCCGAAATA
AAGTCATGTATTGCTTGTTTTTCGTGTGCAAGTAGTTCAGTGACATTGGATTTTTATAGCATTAAAATCCTTGAGTTATCCCTACTATTCTTGAATGATGAATGCTACTA
CTGAGCAGGACTTACCTAAGGTAATCAATTCTAGGATCGTGAGAGATTGCTCATTGCTGAACTTGGCTAAGCGACTTGCTGTGTGATTCTTTACTGTTTACCTGCCTTAG
AAGTCCTAGGGGTGGACACCTTTACAATTTCCAAGCTGGAGGATAACAATTTACTTGTTTGTTAATCATGTTTTAGGCATAAAATTTTGAACTTTAGATGAGTTGGCTAT
GCAGTTTTTAGACAATGTTTATAATCTACATTTTCCCTTTTTGTTGTATTGTAGATGGATGATTCCTGTCTGTTGTCTGTTGAGATGCGGTGCATCAATCATAGTTTCAA
GAATTTGAATGGAGACCGTAAGATTTTTTTATTAAGATGATACGTGACTTGGTTGATGATTTGAGATTTCCAACTGTAGAATAATGTTTTTATGATTCCATGCAACAGTA
AGTAATTTCTTCATTTTGCCCTCTTTCTTCCTACAAGAGTCAAGGACCCTTCTTCCTCACCTCTCCCCAAGTTCATAGGAAAGGGTGTCCACTAGATTCTTGGTGTGAAA
CCATGGTAGCATTTTAGGTGAACCCATTTTGATATTTATTTCTATTCTGAGTATTTAAGACCTAAAGTAGAAAATTGTAGAAACTTGTTCATGATTAGACATGCCTTTTT
TAATTAAAAAAACAATTTAAATTTAAAATACAAAA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFAIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTSEGGGGGVYTLGVFKMW
LSAMFIENLKEQIYPQDLHLDFFIGDVELIIDHNNESVCAIAMMMYDEYRMVRALALKRQDAEIKSCIACFSCASSSVTLDFYSIKILELSLLFLNDECYY