; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC01G024480 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G024480
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLOB domain-containing protein
Genome locationCmU531Chr01:35968971..35969453
RNA-Seq ExpressionCmUC01G024480
SyntenyCmUC01G024480
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052511.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]2.6e-4060.93Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS++L  L Y ER+E   SL++EAEA  +DPV GCVA IS L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP
        Q+RL  LQT+LSIARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP

KAE8647756.1 hypothetical protein Csa_003034 [Cucumis sativus]5.3e-3858.82Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKE---DQLPP
        Q RL  LQT+L+I ++QL +YM      LPP     +S   P       +LPP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKE---DQLPP

XP_004134907.3 protein LATERAL ORGAN BOUNDARIES [Cucumis sativus]5.3e-3858.82Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKE---DQLPP
        Q RL  LQT+L+I ++QL +YM      LPP     +S   P       +LPP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKE---DQLPP

XP_008439580.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]2.6e-4060.93Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS++L  L Y ER+E   SL++EAEA  +DPV GCVA IS L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP
        Q+RL  LQT+LSIARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP

XP_038881578.1 protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]2.9e-5280.65Show/hide
Query:  SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQ
        S S+SQSQK  + YGSPCAACKFLR+KC+PDCIFAPHFPADQPKKFEA+HTIYGASNVS+LLNQLSY ERD+AAKSLIYEAEAWQ+DPVHGCV FISILQ
Subjt:  SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQ

Query:  NRLNDLQTQLSIARRQLSTYMLED
         RLN+LQ +L+IARR+LSTY++ +
Subjt:  NRLNDLQTQLSIARRQLSTYMLED

TrEMBL top hitse value%identityAlignment
A0A0A0KIS2 LOB domain-containing protein7.3e-4156.89Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLED-------------------VNILPPRWPGESS-SQRPTKEDQ
        Q RL  LQT+L+I ++QL +YM                      ++ L P+WP ESS SQ+P  EDQ
Subjt:  QNRLNDLQTQLSIARRQLSTYMLED-------------------VNILPPRWPGESS-SQRPTKEDQ

A0A1S3AYN9 LOB domain-containing protein 12-like1.2e-4060.93Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS++L  L Y ER+E   SL++EAEA  +DPV GCVA IS L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP
        Q+RL  LQT+LSIARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP

A0A2P5DEA8 Lateral organ boundaries domain containing protein2.8e-3257.02Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH +YGASNV++LLN+L+   R+EA  SL YEAEA  +DPV+GCV FIS+L NRL  +QT+L+ A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTYMLEDVNILP
        +L+ Y+     ++P
Subjt:  QLSTYMLEDVNILP

A0A2P5EQE7 Lateral organ boundaries domain containing protein2.8e-3257.02Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH +YGASNV++LLN+L+   R+EA  SL YEAEA  +DPV+GCV FIS+L NRL  +QT+L+ A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTYMLEDVNILP
        +L+ Y+     ++P
Subjt:  QLSTYMLEDVNILP

A0A5D3CQL4 LOB domain-containing protein 12-like1.2e-4060.93Show/hide
Query:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL
        MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS++L  L Y ER+E   SL++EAEA  +DPV GCVA IS L
Subjt:  MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISIL

Query:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP
        Q+RL  LQT+LSIARR+LS+YM  ++         + LPP W   +S  RP
Subjt:  QNRLNDLQTQLSIARRQLSTYMLEDV---------NILPPRWPGESSSQRP

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 61.7e-3159.43Show/hide
Query:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIAR
        GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCVA ISILQ  L  LQ  L+ A+
Subjt:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIAR

Query:  RQLSTY
         +LS Y
Subjt:  RQLSTY

O04479 Protein ASYMMETRIC LEAVES 21.7e-3158.1Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

Q32SG3 LOB domain-containing protein 62.9e-3154.17Show/hide
Query:  SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQ
        S S+S +       GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  ISILQ
Subjt:  SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQ

Query:  NRLNDLQTQLSIARRQLSTY
        + L  LQ  L+ A+ +LS Y
Subjt:  NRLNDLQTQLSIARRQLSTY

Q8LQH4 LOB domain-containing protein 61.7e-3159.43Show/hide
Query:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIAR
        GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCVA ISILQ  L  LQ  L+ A+
Subjt:  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIAR

Query:  RQLSTY
         +LS Y
Subjt:  RQLSTY

Q9FKZ3 LOB domain-containing protein 362.3e-3151.09Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GASNV++LLN+L+  +R++A  SL YEAEA  +DPV+GCV  ISILQ+RL  +   L  A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQ
        +L+TY+     +LP   P   S         LPP PQ
Subjt:  QLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQ

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein1.2e-3258.1Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein1.2e-3258.1Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein1.2e-3258.1Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT1G65620.4 Lateral organ boundaries (LOB) domain family protein1.2e-3258.1Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ 
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTY
        +LS Y
Subjt:  QLSTY

AT5G66870.1 ASYMMETRIC LEAVES 2-like 11.6e-3251.09Show/hide
Query:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR
        SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GASNV++LLN+L+  +R++A  SL YEAEA  +DPV+GCV  ISILQ+RL  +   L  A++
Subjt:  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARR

Query:  QLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQ
        +L+TY+     +LP   P   S         LPP PQ
Subjt:  QLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTTGCCCC
ACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCAACGTCTCTAGGCTTCTCAATCAGTTGAGCTATAAGGAGCGAGATGAAG
CCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAAAGATCCTGTGCATGGTTGCGTTGCCTTTATATCCATTCTTCAGAACAGGCTTAACGATCTTCAAACTCAA
CTCTCCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGGTGAATCGTCAAGTCAACGGCCAACGAAGGAGGATCA
ATTGCCGCCGCCGCCGCAAAATCACAAAAGGATAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTTGCCCC
ACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCAACGTCTCTAGGCTTCTCAATCAGTTGAGCTATAAGGAGCGAGATGAAG
CCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAAAGATCCTGTGCATGGTTGCGTTGCCTTTATATCCATTCTTCAGAACAGGCTTAACGATCTTCAAACTCAA
CTCTCCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGGTGAATCGTCAAGTCAACGGCCAACGAAGGAGGATCA
ATTGCCGCCGCCGCCGCAAAATCACAAAAGGATAGAATACTGA
Protein sequenceShow/hide protein sequence
MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQ
LSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQNHKRIEY