; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC01G024700 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC01G024700
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description40S ribosomal protein S25
Genome locationCmU531Chr01:36166606..36166998
RNA-Seq ExpressionCmUC01G024700
SyntenyCmUC01G024700
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI32218.3 unnamed protein product, partial [Vitis vinifera]6.5e-3484.04Show/hide
Query:  HLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        HLP + +  R +F  MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EVPKYKL+TPSILSDRLR+NGSLAR+
Subjt:  HLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

KAG6573888.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3787.88Show/hide
Query:  LSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        + S+  + Q   LRR NFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  LSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

XP_016900931.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]5.5e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

XP_022945101.1 40S ribosomal protein S25-2-like [Cucurbita moschata]5.5e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

XP_022961406.1 40S ribosomal protein S25-2-like [Cucurbita moschata]5.5e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

TrEMBL top hitse value%identityAlignment
A0A5D3CG38 40S ribosomal protein S252.7e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

A0A6J1FZX1 40S ribosomal protein S252.7e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

A0A6J1HAA0 40S ribosomal protein S252.7e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

A0A6J1HUK6 40S ribosomal protein S252.7e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

A0A6J1HZE7 40S ribosomal protein S252.7e-3398.73Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S251.1e-3188.61Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL+TPS+LSDRLRI+GSLARK
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

Q8GYL5 40S ribosomal protein S25-35.7e-3391.14Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

Q9SIK2 40S ribosomal protein S25-21.1e-3391.14Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

Q9SIW5 40S ribosomal protein S25-14.4e-3391.14Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL+TPSILSDRLRINGSLARK
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

Q9T029 40S ribosomal protein S25-45.7e-3389.87Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein8.2e-3591.14Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

AT2G21580.2 Ribosomal protein S25 family protein4.5e-3389.87Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

AT4G34555.1 Ribosomal protein S25 family protein4.0e-3491.14Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDRLRINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

AT4G39200.1 Ribosomal protein S25 family protein4.0e-3489.87Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK

AT4G39200.2 Ribosomal protein S25 family protein2.2e-3288.61Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL+TPSILSDR+RINGSLAR+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTACAAACCCCCAAAAGGAAGAGAAAAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACAT
CCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGT
GGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCA
ATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTACAAACCCCCAAAAGGAAGAGAAAAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACAT
CCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGT
GGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCA
ATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA
Protein sequenceShow/hide protein sequence
MQLQTPKRKRKAYKKLNSAYSIRICSLSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPS
ILSDRLRINGSLARKEQSRI