; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC02G032140 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G032140
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCmU531Chr02:6216430..6221562
RNA-Seq ExpressionCmUC02G032140
SyntenyCmUC02G032140
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]4.3e-9866.56Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNKD------CQRPYCLQNILKVKTCASKF-RFVLLCERELTTI-------HFN
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q  D       + P C  ++ K  T    F + ++   R++TTI       H N
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNKD------CQRPYCLQNILKVKTCASKF-RFVLLCERELTTI-------HFN

Query:  RSCDMADARGI
           ++A +R I
Subjt:  RSCDMADARGI

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]2.7e-9275.71Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+I+SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASSD S + Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]4.1e-9677.73Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]5.3e-8871.2Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S     L   +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNK
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++ K
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNK

XP_038887003.1 cold-regulated protein 27 isoform X1 [Benincasa hispida]9.3e-10983.67Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQK
        M  SHT SSISPPPL DRRQSLMPPSA+DSTR  SQS SSSIT+DGSN F + +HSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRR ALS +QK
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQK

Query:  IRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC
        +  KP MPNI+SSELMILQDASWQKANIGRNDP LD TADSPAILEDLWINRFPSAGKQCT E PD+LEECG+CS RR +RNT+NSCGSARSSQQIPPCC
Subjt:  IRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC

Query:  HDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
         DSN IITEVSDQNFVDD P ELSG +PIAKRL+K SSDSSGNDQ
Subjt:  HDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein1.3e-9275.71Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  QLDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPI P+I+SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR IR  TNSC SAR+SQ   P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASSD S + Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X12.0e-9677.73Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

A0A5D3C4A3 Cold regulated protein 27, putative isoform 22.1e-9866.56Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK
        M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQLDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+K
Subjt:  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTK

Query:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP
        QK+RRKPIM + +SSELM+LQDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR IR+ TNSCGSAR+SQQ  P
Subjt:  QKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP

Query:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNKD------CQRPYCLQNILKVKTCASKF-RFVLLCERELTTI-------HFN
        CC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS    N Q  D       + P C  ++ K  T    F + ++   R++TTI       H N
Subjt:  CCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNKD------CQRPYCLQNILKVKTCASKF-RFVLLCERELTTI-------HFN

Query:  RSCDMADARGI
           ++A +R I
Subjt:  RSCDMADARGI

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X23.4e-8871.37Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S     L   +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQ

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X12.6e-8871.2Show/hide
Query:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST
        M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S     L   +H  QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+
Subjt:  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHL---NHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALST

Query:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP
        KQK+RRKPIMPNI+SSE M+LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R  IRN TNS  SARSSQQIP
Subjt:  KQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIP

Query:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNK
        PCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KASSDSSGN++ K
Subjt:  PCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQNK

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 276.7e-0929Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ
        V++    + G    +K+++    S+SS  DQ
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ

Q8L983 Cold-regulated protein 282.6e-0528.95Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSS
        NF ++   E  G +   KR R+A++D S
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSS

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.9e-0628.95Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSS
        NF ++   E  G +   KR R+A++D S
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSS

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.9e-0628.95Show/hide
Query:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM
        S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ L+           R RD  S   K          ++ +  
Subjt:  SAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ---------HRRRDALSTKQKIRRKPIMPNITSSELM

Query:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ
        +LQ+  WQK N G+                           KQ  LET           HR  +RN    +N   +  ++ Q    CHD  T  +E S Q
Subjt:  ILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSSQQIPPCCHDSNTIITEVSDQ

Query:  NFVDDCPGELSGAMPIAKRLRKASSDSS
        NF ++   E  G +   KR R+A++D S
Subjt:  NFVDDCPGELSGAMPIAKRLRKASSDSS

AT5G42900.1 cold regulated gene 274.8e-1029Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ
        V++    + G    +K+++    S+SS  DQ
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ

AT5G42900.2 cold regulated gene 274.8e-1029Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+     D + I     EVSDQNF
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTII---TEVSDQNF

Query:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ
        V++    + G    +K+++    S+SS  DQ
Subjt:  VDDCPGELSGAMPIAKRLRKA-SSDSSGNDQ

AT5G42900.3 cold regulated gene 271.6e-1029.13Show/hide
Query:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD
        S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L+            + ST+    RKP     +  +  +L D
Subjt:  STRFNSQSDSSS---ITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQD

Query:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC--HDSNTIITEVSDQNFV
          WQK N+ + +  ++  +  +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+      HD  ++  EVSDQNFV
Subjt:  ASWQKANIGRNDPLLD--YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCC--HDSNTIITEVSDQNFV

Query:  DDCPGELSGAMPIAKRLRKA-SSDSSGNDQ
        ++    + G    +K+++    S+SS  DQ
Subjt:  DDCPGELSGAMPIAKRLRKA-SSDSSGNDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATC
CGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTAAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATA
ACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAA
CGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCA
GGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGAACAAAGATTGCCAGAGGCCATATTGTCTTCAGAA
CATCCTCAAAGTCAAAACTTGTGCGTCCAAATTCAGATTTGTGTTACTGTGTGAGAGGGAGCTGACAACAATTCATTTCAACAGATCATGTGACATGGCTGATGCCAGGG
GTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTG
GAGATGGATGTGGTGATTCCAATTTGA
mRNA sequenceShow/hide mRNA sequence
CCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTTCTATTTTT
GGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCAT
GCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTAAATCATTCTCTGCAACTCG
ATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCG
ACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCC
TTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAG
AATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATC
ATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAA
TGACCAGAACAAAGATTGCCAGAGGCCATATTGTCTTCAGAACATCCTCAAAGTCAAAACTTGTGCGTCCAAATTCAGATTTGTGTTACTGTGTGAGAGGGAGCTGACAA
CAATTCATTTCAACAGATCATGTGACATGGCTGATGCCAGGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAG
AAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTGGAGATGGATGTGGTGATTCCAATTTGA
Protein sequenceShow/hide protein sequence
MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHLNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNI
TSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCP
GELSGAMPIAKRLRKASSDSSGNDQNKDCQRPYCLQNILKVKTCASKFRFVLLCERELTTIHFNRSCDMADARGIHSTKDGASGGPKISSWELLFEKLATFILVSLLSIV
EMDVVIPI