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CmUC02G033470 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G033470
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRibosomal protein S12
Genome locationCmU531Chr02:8447003..8452500
RNA-Seq ExpressionCmUC02G033470
SyntenyCmUC02G033470
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2041250.1 hypothetical protein ES319_D02G135700v1 [Gossypium barbadense]2.8e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
KAG4159037.1 hypothetical protein ERO13_D02G152064v2 [Gossypium hirsutum]2.8e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
TYG46624.1 hypothetical protein ES288_D11G270400v1 [Gossypium darwinii]2.8e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
TYG94638.1 hypothetical protein ES288_A11G204000v1 [Gossypium darwinii]2.8e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
TYI54262.1 hypothetical protein E1A91_D11G062300v1 [Gossypium mustelinum]2.8e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
TrEMBL top hitse value%identityAlignment
A0A5D2EP08 Uncharacterized protein1.4e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
A0A5D2LXE1 Uncharacterized protein1.4e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
A0A5D2YM49 Uncharacterized protein1.4e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
A0A5J5SCK7 Uncharacterized protein1.4e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
A0A5J5VX75 Uncharacterized protein1.4e-10100Show/hide
Query:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
        SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
Subjt:  SYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07689.1 NADH-Ubiquinone/plastoquinone (complex I) protein1.2e-0683.33Show/hide
Query:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC
        AQTKVKRPLAHSSIGHVGYIRTG    F+C
Subjt:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC
ATMG00285.1 NADH dehydrogenase 2A1.2e-0683.33Show/hide
Query:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC
        AQTKVKRPLAHSSIGHVGYIRTG    F+C
Subjt:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC
ATMG01320.1 NADH dehydrogenase 2B1.2e-0683.33Show/hide
Query:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC
        AQTKVKRPLAHSSIGHVGYIRTG    F+C
Subjt:  AQTKVKRPLAHSSIGHVGYIRTGCPLSFTC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGGCTTCTCAAACAGAGGCAGTGTTGCAGAAAAAAGAGCTTTTGTCTTCTTCAGTTAGTGCCCAAACGAAAGTCAAAAGACCTCTAGCTCATAGTTCAATTGG
ACATGTAGGTTATATTCGTACAGGTTGTCCGTTGTCCTTTACTTGTTTAGTGGCATCTGTCTCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAGGAAAGGGA
GGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATTTTCCTCCATACCTTCCCTCTTCTTTCTTTGTGGCTTCTTCATCATGTTGT
TCCATCCTTCAGGGATGTTCGGTAGGGCGATTTGTAAGGGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGGCTTCTCAAACAGAGGCAGTGTTGCAGAAAAAAGAGCTTTTGTCTTCTTCAGTTAGTGCCCAAACGAAAGTCAAAAGACCTCTAGCTCATAGTTCAATTGG
ACATGTAGGTTATATTCGTACAGGTTGTCCGTTGTCCTTTACTTGTTTAGTGGCATCTGTCTCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAGGAAAGGGA
GGGAAACGGATACTCAATTTAAAGTGAGTAAACAGAATTCCATACTCGATCTCATAGATTTTCCTCCATACCTTCCCTCTTCTTTCTTTGTGGCTTCTTCATCATGTTGT
TCCATCCTTCAGGGATGTTCGGTAGGGCGATTTGTAAGGGGAAGATGA
Protein sequenceShow/hide protein sequence
MDRASQTEAVLQKKELLSSSVSAQTKVKRPLAHSSIGHVGYIRTGCPLSFTCLVASVSYGYVKYRISNPSRKGRETDTQFKVSKQNSILDLIDFPPYLPSSFFVASSSCC
SILQGCSVGRFVRGR