; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC02G034100 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G034100
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReverse transcriptase
Genome locationCmU531Chr02:9819171..9820444
RNA-Seq ExpressionCmUC02G034100
SyntenyCmUC02G034100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]1.8e-1248.96Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSK
        V Q E+KFTE SRFA DL+    RKI+RF+RGL + I+G + L+ PTT+A A+  AL+MDK+  +K Q    + +   S G KRK PP  S Q SK
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSK

XP_022155872.1 uncharacterized protein LOC111022885 [Momordica charantia]1.8e-1245.13Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRFA +L+     KI+RF++GL + IRG V L+ P T+A A+  ALIMDK+ + + Q      E  +S G KRK  PA +DQ  +A + 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
         + Q    P+C S
Subjt:  TSGQATTLPLCGS

XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]2.4e-1246.02Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRF    +   + KI +FI GL  EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KRK     S Q S+ H+ 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
           + TT P C S
Subjt:  TSGQATTLPLCGS

XP_022156794.1 uncharacterized protein LOC111023627 [Momordica charantia]1.8e-1248.45Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKA
        V Q E+KFTELS FA DL+   E+KI+RF++GL + IRG V L+ PTT+A A+   L+MDK+ T K Q  H   E  +S G KRK+P    +Q  +A
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKA

XP_022156992.1 uncharacterized protein LOC111023821 [Momordica charantia]1.4e-1246.02Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRF    + + + KI +FI GLH EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KRK     S Q S+ H+ 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
           + T  P+C S
Subjt:  TSGQATTLPLCGS

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196038.8e-1348.96Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSK
        V Q E+KFTE SRFA DL+    RKI+RF+RGL + I+G + L+ PTT+A A+  AL+MDK+  +K Q    + +   S G KRK PP  S Q SK
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSK

A0A6J1DNV8 uncharacterized protein LOC1110229251.2e-1246.02Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRF    +   + KI +FI GL  EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KRK     S Q S+ H+ 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
           + TT P C S
Subjt:  TSGQATTLPLCGS

A0A6J1DQJ4 uncharacterized protein LOC1110228858.8e-1345.13Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRFA +L+     KI+RF++GL + IRG V L+ P T+A A+  ALIMDK+ + + Q      E  +S G KRK  PA +DQ  +A + 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
         + Q    P+C S
Subjt:  TSGQATTLPLCGS

A0A6J1DTE5 uncharacterized protein LOC1110238216.7e-1346.02Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP
        V Q ERKFTELSRF    + + + KI +FI GLH EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KRK     S Q S+ H+ 
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRP

Query:  TSGQATTLPLCGS
           + T  P+C S
Subjt:  TSGQATTLPLCGS

A0A6J1DUN2 uncharacterized protein LOC1110236278.8e-1348.45Show/hide
Query:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKA
        V Q E+KFTELS FA DL+   E+KI+RF++GL + IRG V L+ PTT+A A+   L+MDK+ T K Q  H   E  +S G KRK+P    +Q  +A
Subjt:  VIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCTTATGTGCAACTTGCGGTACTTGTAACTTGGTATCAGAGAGTGATCCAGTGTGAAAGGAAGTTTACCGAGTTGTCTCGTTTTGCACCCGACCTGGTGAGTAT
GTTAGAGAGGAAGATTCAAAGGTTCATCAGGGGCCTACATGAGGAAATCAGAGGTGCGGTCGCCTTAAAGGAGCCAACGACCTTTGCGGCAGCGCTTGGGGCCGCCCTGA
TCATGGACAAAAACACGACCAAGAAACCTCAAGCGACACACTCACGTTGGGAGGCCAGCACCTCATTTGGATTTAAAAGGAAGTCTCCCCCAGCCCCGTCAGATCAAACT
TCCAAGGCCCACCGTCCAACCTCGGGACAAGCTACCACCCTCCCATTGTGCGGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCTTATGTGCAACTTGCGGTACTTGTAACTTGGTATCAGAGAGTGATCCAGTGTGAAAGGAAGTTTACCGAGTTGTCTCGTTTTGCACCCGACCTGGTGAGTAT
GTTAGAGAGGAAGATTCAAAGGTTCATCAGGGGCCTACATGAGGAAATCAGAGGTGCGGTCGCCTTAAAGGAGCCAACGACCTTTGCGGCAGCGCTTGGGGCCGCCCTGA
TCATGGACAAAAACACGACCAAGAAACCTCAAGCGACACACTCACGTTGGGAGGCCAGCACCTCATTTGGATTTAAAAGGAAGTCTCCCCCAGCCCCGTCAGATCAAACT
TCCAAGGCCCACCGTCCAACCTCGGGACAAGCTACCACCCTCCCATTGTGCGGCTCATGA
Protein sequenceShow/hide protein sequence
MWSYVQLAVLVTWYQRVIQCERKFTELSRFAPDLVSMLERKIQRFIRGLHEEIRGAVALKEPTTFAAALGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQT
SKAHRPTSGQATTLPLCGS