; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC02G035340 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G035340
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
Genome locationCmU531Chr02:13674622..13682296
RNA-Seq ExpressionCmUC02G035340
SyntenyCmUC02G035340
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833277.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.5e-0656.86Show/hide
Query:  CPVCGKGHSGECFSKDRCFACGMIGHQQKQCNASMDFCNQAKEMKREISCK
        CPVC KGH+GEC  KDRCFACG  GH +KQC A  +  +Q K  +R+I  K
Subjt:  CPVCGKGHSGECFSKDRCFACGMIGHQQKQCNASMDFCNQAKEMKREISCK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGGCTGCTGGAAACCCCCAAATTTATAGAGTTTGGCCGCCCAAAAATTTACCAAAAATACAAATTTTTCATTTAAGGAAAGCTGGCGCCGCGGCGCTAGGGCT
GCATCAGAAAAGTTTGCTCTTGGGTTTTAGCTCCGCGGCAGCGCCGTCTAAGCGCCGTGATGTTGTGATGCGTTCAAAAATATTATTCTTGGGCATTAGCGCCGCGGCAG
CGCCGCAACGCTGTCATGCGTTCAACAAGGATGCGTCGAGCGCTGCGGCAACGCCGTTTCGGCCCTGCGGTGCTACTATGCGTCCAGAACGATGCGTTCATGTTTCAGCA
CCGCGGTGCTACTATGCATCCGGAACGATGTGTTCATGTTTCAGCGCCGCGGCGCTATCCCAAAATTCGCCCTTTTTAGTTTTTCAGCTCTTTTTCACCAGCATAGTTTA
CGAGAAACCTGGGGAAGGTCAAGTGAATTTTAGCAATAAGTTGAAAGAGAAATTAAGGATTACTAATCGGAAAAGAATCTCTGAGAGGAAGGTTGAATGCGGTAAGTTCA
AAGTATGGAAGTTGCAATGTAGTAAGATTGCGGGAAATTGTTATGAGCAATCGAACAAGCTAAGGCAGGTATATGCCGGAACTTTGGTGTCACCATGTGTTGGAAGTGAA
GTTAGAGCTCGGTCAGGAAAAGATGTACTTAACCTACCATGCGTTGATAAGAATACCTTGAATTGGAGAGTAGTTGTATGTGATAGGCTGCAGCTATGTGCTGAAGGTTT
GCTATGTATTGATAAGCTATGTGATGGGCAGCAGCTATGCTCTGAAGCATGCGTCCAAAAGTTGAGCAAGAGTAAATGGTCGGGGCTATGCGTTGATGAGATTGTTAGAA
CCAGCAGGCATGCGTTGGTTGAGATCAGTAGAAGGGAAAGCAAAGGGAAACGAAAACGCTTGACGATCAGGTGCCCAGTTTGCGGAAAAGGACATTCGGGGGAATGTTTT
AGTAAAGATAGATGCTTTGCATGCGGAATGATAGGACATCAACAGAAACAATGCAATGCATCTATGGACTTTTGCAACCAAGCTAAAGAGATGAAAAGAGAGATTTCCTG
TAAGAAATGTGGACGACGACATAGAGAAGATTATGAAGGAAGAGAGGATGTTTGTTATATGTGTGAGCAGCCAGGGTGTAACACCCTATCTCAGAACCTAGGTATTCAAG
ATGAAATTCTATGCGTTGAGATGAATGGTATTAGGAAAAGAGTGGATGTCTCACCAAGGCGCTGCCGCGGCGCTGAGGCAAAAAAGCATCAGCATGGACGCAGAGCAGCA
ATGCGGCGCTGGGAAGGCGTTGCTTCGACGCATCGGCGCTGTGACGGCACTGCCGCGGCGCGAAAACCGGAGAGCAACTTAATTTTGGTCGCAACGCTAGCGCCGCGGCG
CTATGCGTCAGCGCCGTGGCGCCAGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGGCTGCTGGAAACCCCCAAATTTATAGAGTTTGGCCGCCCAAAAATTTACCAAAAATACAAATTTTTCATTTAAGGAAAGCTGGCGCCGCGGCGCTAGGGCT
GCATCAGAAAAGTTTGCTCTTGGGTTTTAGCTCCGCGGCAGCGCCGTCTAAGCGCCGTGATGTTGTGATGCGTTCAAAAATATTATTCTTGGGCATTAGCGCCGCGGCAG
CGCCGCAACGCTGTCATGCGTTCAACAAGGATGCGTCGAGCGCTGCGGCAACGCCGTTTCGGCCCTGCGGTGCTACTATGCGTCCAGAACGATGCGTTCATGTTTCAGCA
CCGCGGTGCTACTATGCATCCGGAACGATGTGTTCATGTTTCAGCGCCGCGGCGCTATCCCAAAATTCGCCCTTTTTAGTTTTTCAGCTCTTTTTCACCAGCATAGTTTA
CGAGAAACCTGGGGAAGGTCAAGTGAATTTTAGCAATAAGTTGAAAGAGAAATTAAGGATTACTAATCGGAAAAGAATCTCTGAGAGGAAGGTTGAATGCGGTAAGTTCA
AAGTATGGAAGTTGCAATGTAGTAAGATTGCGGGAAATTGTTATGAGCAATCGAACAAGCTAAGGCAGGTATATGCCGGAACTTTGGTGTCACCATGTGTTGGAAGTGAA
GTTAGAGCTCGGTCAGGAAAAGATGTACTTAACCTACCATGCGTTGATAAGAATACCTTGAATTGGAGAGTAGTTGTATGTGATAGGCTGCAGCTATGTGCTGAAGGTTT
GCTATGTATTGATAAGCTATGTGATGGGCAGCAGCTATGCTCTGAAGCATGCGTCCAAAAGTTGAGCAAGAGTAAATGGTCGGGGCTATGCGTTGATGAGATTGTTAGAA
CCAGCAGGCATGCGTTGGTTGAGATCAGTAGAAGGGAAAGCAAAGGGAAACGAAAACGCTTGACGATCAGGTGCCCAGTTTGCGGAAAAGGACATTCGGGGGAATGTTTT
AGTAAAGATAGATGCTTTGCATGCGGAATGATAGGACATCAACAGAAACAATGCAATGCATCTATGGACTTTTGCAACCAAGCTAAAGAGATGAAAAGAGAGATTTCCTG
TAAGAAATGTGGACGACGACATAGAGAAGATTATGAAGGAAGAGAGGATGTTTGTTATATGTGTGAGCAGCCAGGGTGTAACACCCTATCTCAGAACCTAGGTATTCAAG
ATGAAATTCTATGCGTTGAGATGAATGGTATTAGGAAAAGAGTGGATGTCTCACCAAGGCGCTGCCGCGGCGCTGAGGCAAAAAAGCATCAGCATGGACGCAGAGCAGCA
ATGCGGCGCTGGGAAGGCGTTGCTTCGACGCATCGGCGCTGTGACGGCACTGCCGCGGCGCGAAAACCGGAGAGCAACTTAATTTTGGTCGCAACGCTAGCGCCGCGGCG
CTATGCGTCAGCGCCGTGGCGCCAGCGTTAA
Protein sequenceShow/hide protein sequence
MIWAAGNPQIYRVWPPKNLPKIQIFHLRKAGAAALGLHQKSLLLGFSSAAAPSKRRDVVMRSKILFLGISAAAAPQRCHAFNKDASSAAATPFRPCGATMRPERCVHVSA
PRCYYASGTMCSCFSAAALSQNSPFLVFQLFFTSIVYEKPGEGQVNFSNKLKEKLRITNRKRISERKVECGKFKVWKLQCSKIAGNCYEQSNKLRQVYAGTLVSPCVGSE
VRARSGKDVLNLPCVDKNTLNWRVVVCDRLQLCAEGLLCIDKLCDGQQLCSEACVQKLSKSKWSGLCVDEIVRTSRHALVEISRRESKGKRKRLTIRCPVCGKGHSGECF
SKDRCFACGMIGHQQKQCNASMDFCNQAKEMKREISCKKCGRRHREDYEGREDVCYMCEQPGCNTLSQNLGIQDEILCVEMNGIRKRVDVSPRRCRGAEAKKHQHGRRAA
MRRWEGVASTHRRCDGTAAARKPESNLILVATLAPRRYASAPWRQR