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CmUC02G035480 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G035480
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationCmU531Chr02:14255681..14257462
RNA-Seq ExpressionCmUC02G035480
SyntenyCmUC02G035480
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0035246 - peptidyl-arginine N-methylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016274 - protein-arginine N-methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033137.1 polyprotein [Cucumis melo var. makuwa]6.7e-0946.39Show/hide
Query:  KTFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCDEEWDVLKDEDMGA-IELKQTEVEPI----VELCLNSVVVLTNPGTMKL
        +TFMNGL  W+K EVE  E  GLA MMK+A  +EN+E            EE +++++E   A IE+KQ EV+ +    +EL +NSVV L+NPGTMK+
Subjt:  KTFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCDEEWDVLKDEDMGA-IELKQTEVEPI----VELCLNSVVVLTNPGTMKL

KAA0039351.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-0935.86Show/hide
Query:  FMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL---------------------GVC-----------------------------DEEW
        FMNGL+ WIK EVECWE +GLA MMK+AQ VEN+++ + EAG                      G+C                             DEE 
Subjt:  FMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL---------------------GVC-----------------------------DEEW

Query:  DVLKDEDMG-AIELKQTEVEPIV----ELCLNSVVVLTNPGTMKL
        +V+++ D G   ELK  EVE  +    ++ +N VV +TNPGTM+L
Subjt:  DVLKDEDMG-AIELKQTEVEPIV----ELCLNSVVVLTNPGTMKL

KAA0041314.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]8.8e-0938.33Show/hide
Query:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P
        TFMNGL  WI+AEV       LA MM++AQLVEN+E+ R EA L  C+                         EE+++++ +++   EL + EV+     
Subjt:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P

Query:  IVELCLNSVVVLTNPGTMKL
         VEL +NSVV L +PGTMK+
Subjt:  IVELCLNSVVVLTNPGTMKL

KAA0054240.1 disease resistance protein [Cucumis melo var. makuwa]8.0e-1036Show/hide
Query:  MNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL----------------------------GVC---------------------------
        MNGL+ WIK EVECWE VGLA MMK+AQ +EN+EL R EAGL                            G+C                           
Subjt:  MNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL----------------------------GVC---------------------------

Query:  -DEEWDVLKDED-MGAIELKQTEVE----PIVELCLNSVVVLTNPGTMKL
         +EE ++ +++D     ++K  EVE    P+VEL +NSVV L+ PGTMK+
Subjt:  -DEEWDVLKDED-MGAIELKQTEVE----PIVELCLNSVVVLTNPGTMKL

TYK02775.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]4.4e-0837.5Show/hide
Query:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P
        TFMNGL  WI+AEV       LA MM++AQLVEN+E+ R EA L  C+                         EE+++++ +++   EL + EV+     
Subjt:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P

Query:  IVELCLNSVVVLTNPGTMKL
         VEL +NSVV L +P TMK+
Subjt:  IVELCLNSVVVLTNPGTMKL

TrEMBL top hitse value%identityAlignment
A0A5A7SUY2 Polyprotein3.3e-0946.39Show/hide
Query:  KTFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCDEEWDVLKDEDMGA-IELKQTEVEPI----VELCLNSVVVLTNPGTMKL
        +TFMNGL  W+K EVE  E  GLA MMK+A  +EN+E            EE +++++E   A IE+KQ EV+ +    +EL +NSVV L+NPGTMK+
Subjt:  KTFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCDEEWDVLKDEDMGA-IELKQTEVEPI----VELCLNSVVVLTNPGTMKL

A0A5A7TCJ3 Ty3-gypsy retrotransposon protein1.5e-0935.86Show/hide
Query:  FMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL---------------------GVC-----------------------------DEEW
        FMNGL+ WIK EVECWE +GLA MMK+AQ VEN+++ + EAG                      G+C                             DEE 
Subjt:  FMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL---------------------GVC-----------------------------DEEW

Query:  DVLKDEDMG-AIELKQTEVEPIV----ELCLNSVVVLTNPGTMKL
        +V+++ D G   ELK  EVE  +    ++ +N VV +TNPGTM+L
Subjt:  DVLKDEDMG-AIELKQTEVEPIV----ELCLNSVVVLTNPGTMKL

A0A5A7TCX9 Putative retroelement pol polyprotein4.3e-0938.33Show/hide
Query:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P
        TFMNGL  WI+AEV       LA MM++AQLVEN+E+ R EA L  C+                         EE+++++ +++   EL + EV+     
Subjt:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P

Query:  IVELCLNSVVVLTNPGTMKL
         VEL +NSVV L +PGTMK+
Subjt:  IVELCLNSVVVLTNPGTMKL

A0A5A7UG48 Disease resistance protein3.9e-1036Show/hide
Query:  MNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL----------------------------GVC---------------------------
        MNGL+ WIK EVECWE VGLA MMK+AQ +EN+EL R EAGL                            G+C                           
Subjt:  MNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGL----------------------------GVC---------------------------

Query:  -DEEWDVLKDED-MGAIELKQTEVE----PIVELCLNSVVVLTNPGTMKL
         +EE ++ +++D     ++K  EVE    P+VEL +NSVV L+ PGTMK+
Subjt:  -DEEWDVLKDED-MGAIELKQTEVE----PIVELCLNSVVVLTNPGTMKL

A0A5D3BUJ8 Transposon Ty3-I Gag-Pol polyprotein2.1e-0837.5Show/hide
Query:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P
        TFMNGL  WI+AEV       LA MM++AQLVEN+E+ R EA L  C+                         EE+++++ +++   EL + EV+     
Subjt:  TFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCD-------------------------EEWDVLKDEDMGAIELKQTEVE----P

Query:  IVELCLNSVVVLTNPGTMKL
         VEL +NSVV L +P TMK+
Subjt:  IVELCLNSVVVLTNPGTMKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCTTCATGAATGGGCTGACTACATGGATTAAAGCCGAAGTTGAATGTTGGGAACTCGTCGGGCTGGCTGGCATGATGAAGATAGCCCAATTAGTCGAAAATCA
GGAGTTGACAAGGAGTGAAGCGGGCCTGGGGGTATGTGATGAGGAGTGGGACGTTTTAAAGGATGAAGACATGGGGGCGATTGAACTCAAACAAACAGAAGTTGAGCCGA
TAGTGGAGTTGTGTTTGAACTCGGTGGTGGTGTTGACAAATCCAGGAACGATGAAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCTTCATGAATGGGCTGACTACATGGATTAAAGCCGAAGTTGAATGTTGGGAACTCGTCGGGCTGGCTGGCATGATGAAGATAGCCCAATTAGTCGAAAATCA
GGAGTTGACAAGGAGTGAAGCGGGCCTGGGGGTATGTGATGAGGAGTGGGACGTTTTAAAGGATGAAGACATGGGGGCGATTGAACTCAAACAAACAGAAGTTGAGCCGA
TAGTGGAGTTGTGTTTGAACTCGGTGGTGGTGTTGACAAATCCAGGAACGATGAAACTCTGA
Protein sequenceShow/hide protein sequence
MKTFMNGLTTWIKAEVECWELVGLAGMMKIAQLVENQELTRSEAGLGVCDEEWDVLKDEDMGAIELKQTEVEPIVELCLNSVVVLTNPGTMKL