CuGenDBv2

Gene ID	CmUC02G036340
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	CmU531Chr02:20576646..20583108
RNA-Seq Expression	CmUC02G036340
Synteny	CmUC02G036340
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR020586 - Photosystem I PsaA/PsaB, conserved site IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ADD30829.1 photosystem I P700 apoprotein A1 [Bulnesia arborea]

5.3e-41

92.31

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

KAG6467603.1 hypothetical protein ZIOFF_074546 [Zingiber officinale]

1.2e-40

87.5

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWMDVFMGEVEMSR
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM   + E  + R
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWMDVFMGEVEMSR

KAG6483931.1 hypothetical protein ZIOFF_060724 [Zingiber officinale]

1.2e-40

87.5

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWMDVFMGEVEMSR
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM   + E  + R
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWMDVFMGEVEMSR

YP_009669070.1 photosystem I P700 apoprotein A1 [Guaiacum angustifolium]

5.3e-41

92.31

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

YP_009689423.1 photosystem I P700 chlorophyll A apoprotein A1 [Ypsilandra yunnanensis]

1.5e-40

92.39

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Query:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        GS F   +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

TrEMBL top hits

e value

%identity

Alignment

A0A0G2RBE8 Photosystem I P700 chlorophyll a apoprotein A1

7.5e-41

92.39

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Query:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        GS F   +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

A0A4Y5PPT0 Photosystem I P700 chlorophyll a apoprotein A1

2.6e-41

92.31

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

A0A5C1D8B1 Photosystem I P700 chlorophyll a apoprotein A1

7.5e-41

92.39

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Query:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        GS F   +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  GSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

A0A5J6KDA3 Photosystem I P700 chlorophyll a apoprotein A1

7.5e-41

97.65

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

D3WDE2 Photosystem I P700 chlorophyll a apoprotein A1

2.6e-41

92.31

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Query:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        S F+  +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  SRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

SwissProt top hits

e value

%identity

Alignment

Q06GZ7 Photosystem I P700 chlorophyll a apoprotein A1

4.5e-43

96.47

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

2.6e-43

97.65

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Q9MUC0 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)

2.6e-43

97.65

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Q9MUJ5 Photosystem I P700 chlorophyll a apoprotein A1

4.5e-43

96.47

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Q9MUJ9 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)

4.5e-43

96.47

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

2.6e-22

58.11

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Query:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        + +G  DFLVHH  A  +H T LIL+KG L +R S+L+PDK + G+ FPCDGPGRGGTC +SAWD   L +FWM
Subjt:  IPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

ATCG00350.1 Photosystem I, PsaA/PsaB protein

4.2e-44

96.47

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Query:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM
        +AVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLF+RSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHV LGLFWM
Subjt:  LAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWM

Sequences

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CDS sequence

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ATGGTTAATTTGCCCGAGATTGGCTCAAGATTTAGTTTACGATTGGCAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCGTTAGGAACTGCAGATTTTTTGGTACATCA
TATTCATGCATTTACGATTCATGTAACGGTATTGATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATACCGGATAAAGCAAATCTTGGTTTTCGTTTCC
CTTGTGATGGACCCGGAAGAGGGGGTACATGTCAAGTATCCGCTTGGGATCATGTCTCCTTAGGGCTATTTTGGATGGATGTTTTCATGGGTGAGGTAGAGATGAGTAGG
TTTTTCACGCCACCACCTGCACTTTTAATTGTTGTGAAATTCTCCATTTAA

mRNA sequence

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Protein sequence

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MVNLPEIGSRFSLRLAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVSLGLFWMDVFMGEVEMSR
FFTPPPALLIVVKFSI

CmUC02G036340 (gene) of Watermelon (USVL531) v1 genome