; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC02G036740 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G036740
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionPMD domain-containing protein
Genome locationCmU531Chr02:22642357..22642927
RNA-Seq ExpressionCmUC02G036740
SyntenyCmUC02G036740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]3.1e-0528.99Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETA----------------------TNKSWQLEE------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEA
        MWE I  KIMRTPF+    L+ E A                      T+K+ QL E         +L K L G++  + ++   L    E +EL  +L +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETA----------------------TNKSWQLEE------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEA

Query:  VKTTRIEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
        +     ++S L  E  E +NQ +LE +K ++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  VKTTRIEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

KAA0042436.1 hypothetical protein E6C27_scaffold266G00150 [Cucumis melo var. makuwa]3.4e-0429.22Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKSW----------QLEEAKFSLEKVLYG----ESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFE
        MWE I  KIMR PF     L+ E AT+ SW           LEE   S  K +      +SS  AK  +  +  R+ +E T+ ++   T    + + + +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKSW----------QLEEAKFSLEKVLYG----ESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFE

Query:  TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
         + ++Q +LE +K+++  + +ES  A++++  +AL ++ + +EA +EE +N+KW
Subjt:  TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]4.5e-0428Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELL
        MWE I  KIMRTPF+    L+ E AT  S            LEE   S  K +   +   +  +  L    +  +L  K  A+      + +L  + + +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELL

Query:  NQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
        +Q +LE +K+++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  NQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

OMO73364.1 hypothetical protein CCACVL1_17307 [Corchorus capsularis]1.0e-0331.13Show/hide
Query:  MWETIHKKIMRTPFDKF---------LFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLN
        +WE+I  KI RTPFD+          +F   E   +++ +L+     LE+ +  ES      +TL   +   E+  + L+  K  ++E S L    + L 
Subjt:  MWETIHKKIMRTPFDKF---------LFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLN

Query:  QHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKWLP
          +   S +RE  +  ES   LS+ D KALKVL  +L +++E+L+N KW P
Subjt:  QHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKWLP

TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]1.4e-0530.49Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEE-------------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTR
        MWE I  KIMRTPF+    L+ E AT  S            LEE                +L K L G++  + ++ T L    E +EL  +L ++    
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEE-------------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTR

Query:  IEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
         ++S L  E  E +NQ +LE +K ++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  IEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

TrEMBL top hitse value%identityAlignment
A0A1R3HSY5 Uncharacterized protein4.8e-0431.13Show/hide
Query:  MWETIHKKIMRTPFDKF---------LFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLN
        +WE+I  KI RTPFD+          +F   E   +++ +L+     LE+ +  ES      +TL   +   E+  + L+  K  ++E S L    + L 
Subjt:  MWETIHKKIMRTPFDKF---------LFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLN

Query:  QHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKWLP
          +   S +RE  +  ES   LS+ D KALKVL  +L +++E+L+N KW P
Subjt:  QHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKWLP

A0A5A7T019 PMD domain-containing protein1.5e-0528.99Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETA----------------------TNKSWQLEE------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEA
        MWE I  KIMRTPF+    L+ E A                      T+K+ QL E         +L K L G++  + ++   L    E +EL  +L +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETA----------------------TNKSWQLEE------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEA

Query:  VKTTRIEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
        +     ++S L  E  E +NQ +LE +K ++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  VKTTRIEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

A0A5A7TKG1 Uncharacterized protein1.7e-0429.22Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKSW----------QLEEAKFSLEKVLYG----ESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFE
        MWE I  KIMR PF     L+ E AT+ SW           LEE   S  K +      +SS  AK  +  +  R+ +E T+ ++   T    + + + +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKSW----------QLEEAKFSLEKVLYG----ESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFE

Query:  TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
         + ++Q +LE +K+++  + +ES  A++++  +AL ++ + +EA +EE +N+KW
Subjt:  TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

A0A5A7U8L3 PMD domain-containing protein2.2e-0428Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELL
        MWE I  KIMRTPF+    L+ E AT  S            LEE   S  K +   +   +  +  L    +  +L  K  A+      + +L  + + +
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELL

Query:  NQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
        +Q +LE +K+++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  NQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

A0A5D3BQ12 PMD domain-containing protein6.7e-0630.49Show/hide
Query:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEE-------------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTR
        MWE I  KIMRTPF+    L+ E AT  S            LEE                +L K L G++  + ++ T L    E +EL  +L ++    
Subjt:  MWETIHKKIMRTPFDKFLFLKDETATNKS----------WQLEE-------------AKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTR

Query:  IEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW
         ++S L  E  E +NQ +LE +K ++  + +ES  A++++  +AL  + + +EA +EE +N+KW
Subjt:  IEMSKLIFE-TELLNQHKLEASKVRETTSNIESISALSDKDTKALKVLYKMLEATQEELENYKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAGACAATACATAAGAAAATCATGCGTACTCCTTTTGATAAATTTCTTTTCCTTAAAGATGAAACTGCAACAAATAAAAGTTGGCAACTAGAGGAAGCCAAGTT
TAGCTTAGAGAAGGTACTATATGGTGAAAGCAGTACACTTGCCAAGAAGAATACACTTTTGGAAGGCATCCGGGAAGAGGAAGAATTGACAACCAAGCTAGAAGCTGTTA
AAACTACACGAATTGAGATGTCCAAGCTGATTTTTGAGACTGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAGTGCGGGAGACTACAAGTAATATTGAAAGCATT
TCTGCTCTTAGTGATAAAGACACTAAAGCTTTGAAGGTACTTTACAAAATGTTAGAGGCAACGCAAGAGGAACTGGAGAACTACAAATGGTTGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAGACAATACATAAGAAAATCATGCGTACTCCTTTTGATAAATTTCTTTTCCTTAAAGATGAAACTGCAACAAATAAAAGTTGGCAACTAGAGGAAGCCAAGTT
TAGCTTAGAGAAGGTACTATATGGTGAAAGCAGTACACTTGCCAAGAAGAATACACTTTTGGAAGGCATCCGGGAAGAGGAAGAATTGACAACCAAGCTAGAAGCTGTTA
AAACTACACGAATTGAGATGTCCAAGCTGATTTTTGAGACTGAACTTTTGAATCAACATAAACTCGAAGCTTCTAAAGTGCGGGAGACTACAAGTAATATTGAAAGCATT
TCTGCTCTTAGTGATAAAGACACTAAAGCTTTGAAGGTACTTTACAAAATGTTAGAGGCAACGCAAGAGGAACTGGAGAACTACAAATGGTTGCCATGA
Protein sequenceShow/hide protein sequence
MWETIHKKIMRTPFDKFLFLKDETATNKSWQLEEAKFSLEKVLYGESSTLAKKNTLLEGIREEEELTTKLEAVKTTRIEMSKLIFETELLNQHKLEASKVRETTSNIESI
SALSDKDTKALKVLYKMLEATQEELENYKWLP