; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC02G040010 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC02G040010
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionF-box protein
Genome locationCmU531Chr02:27830006..27832077
RNA-Seq ExpressionCmUC02G040010
SyntenyCmUC02G040010
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056113.1 F-box protein SKIP1 [Cucumis melo var. makuwa]6.5e-16291.75Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W  AA D SLFSHFDLEPRFESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]8.3e-15789.11Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATDSSLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSL LVAQGCPNLEVLSIKSC N+TDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPD+YLN+CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCP LKYLDLFGCV+LTSRDI NATSSL+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_008452697.1 PREDICTED: F-box protein SKIP1 [Cucumis melo]1.7e-16292.08Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRFESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_022946543.1 F-box protein SKIP1-like [Cucurbita moschata]1.8e-15688.78Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATDSSLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSL LVAQGCPNLEVLSIKSC N+TDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPD+YLN+CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCP LKYLDLFGCV+LTSRDI NATS+L+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]7.7e-17196.04Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEP SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATD SLFSHFDLEPRFES PTESPAWWSPEFETKIDSMLRSAVHWSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKT+KRNFFNNLDPSQHKGIVPDNYLNSCPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLK+LDLFGCV+LTSRDIANATSS++NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP18.3e-16392.08Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRFESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP13.2e-16291.75Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W  AA D SLFSHFDLEPRFESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP18.3e-16392.08Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRFESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSLD VAQGCPNLEVLSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNNLDPSQHKGIVPDNYL++CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1G461 F-box protein SKIP1-like8.9e-15788.78Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATDSSLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI

Query:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        RHCSDSSL LVAQGCPNLEVLSIKSC N+TDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPD+YLN+CPQ
Subjt:  RHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCP LKYLDLFGCV+LTSRDI NATS+L+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1KKL1 F-box protein SKIP1-like8.9e-15790.17Show/hide
Query:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSL
        +SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATDSSLFSHFDL+PRF+S PTESPAWWSP+FETKIDSMLRSAV WSLGSLS+IRIRHCSDSSL
Subjt:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSL

Query:  DLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAA
         LVAQGCPNLEVLSIKSC N+TDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPD+YLN+CPQDVDSEA A
Subjt:  DLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAA

Query:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        IAKFMPNLEHLEL FSK+SAKAL+LIC+GCP LKYLDLFGCV+LTSRDI NATSSL+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP12.1e-9458.33Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W     D  L+S FDLEP F+S P ES   WSPEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDS

Query:  SLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEA
        +L   A  CPNL+VL+I+S PN+TD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+H G VP  YL++CPQD D+EA
Subjt:  SLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEA

Query:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L+ ICEGCPKL+YLDLFGCV L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 192.4e-7452.31Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL
        W+ELT ECL +I SRL+ EQRW GPMLV K W  A  D +L + FDLE RF S P ES  WW+PEFE K+DS LRS V  S G L+ IRIRHC++ SL  
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL

Query:  VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIA
         A+ CPNLEVL IK+CPN+TD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P +YL + P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIA

Query:  KFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWR
        K+M  L+HLE+ +S L+A+ L  +C+GC  L+Y+DL GC+SLT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  KFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWR

Q9M0U8 Putative F-box/LRR-repeat protein 211.4e-1829.88Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI--RHCS
        E  +W +L  E  T+IL RL++         VCK W R   D S++   +         T     ++ +F     SM R  V  S G L  I +     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI--RHCS

Query:  DSSLDLVAQGCPNLEVLSIKSC-PNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSC-PQDV
        DS L  +     NL  L +  C P +T   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N L+   P + 
Subjt:  DSSLDLVAQGCPNLEVLSIKSC-PNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSC-PQDV

Query:  DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLT
        D +A AIA+ MP L HL+L  ++L+   L+ I +GCP L++LD+  C  ++
Subjt:  DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLT

Q9S9V8 Putative F-box/LRR-repeat protein 92.1e-2231.37Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R   D S++   D+  +            S E    I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIR

Query:  HCSDSS-LDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        +  ++S L+ +A    NL  L +  C  +  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL
        DV   D  A AIA+ MP L HL+L  + LS   L+ I EGCP LK L L  C+++
Subjt:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL

Q9S9V9 Putative F-box/LRR-repeat protein 237.8e-2533.61Show/hide
Query:  SWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLD
        +WAEL  +  ++IL RL   +  +    VCK WHR   D S++   D++ R + A           F+  ++SM R AV  S G L  I I +   + L 
Subjt:  SWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLD

Query:  L-VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAA
        + +A    NL+ L +  C  ITD  +AK       L  +++SYC   S  SL  IG+ CPN+KTLK N              P+   ++     D  A A
Subjt:  L-VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAA

Query:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL
        IA+ MP L HL+L  + L+ K L+ I +GCP L++LDL  C ++
Subjt:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein3.8e-1930.65Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSD-
        ES++W EL  E  + IL RL   +       VC+ W R   D S++   D+    +            + +  ++ M R AV  S G L  I I +    
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSD-

Query:  SSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ-DVDS
          L+ +A    NL  L +  C  ITD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ + D 
Subjt:  SSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ-DVDS

Query:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL
        +A AIA+ MP L HL+L  + LS   L+ I + C  L++LDL  C ++
Subjt:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL

AT4G05470.1 RNI-like superfamily protein1.0e-1929.88Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI--RHCS
        E  +W +L  E  T+IL RL++         VCK W R   D S++   +         T     ++ +F     SM R  V  S G L  I +     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRI--RHCS

Query:  DSSLDLVAQGCPNLEVLSIKSC-PNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSC-PQDV
        DS L  +     NL  L +  C P +T   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K     N L+   P + 
Subjt:  DSSLDLVAQGCPNLEVLSIKSC-PNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSC-PQDV

Query:  DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLT
        D +A AIA+ MP L HL+L  ++L+   L+ I +GCP L++LD+  C  ++
Subjt:  DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLT

AT4G05497.1 RNI-like superfamily protein1.5e-2331.37Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R   D S++   D+  +            S E    I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIR

Query:  HCSDSS-LDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ
        +  ++S L+ +A    NL  L +  C  +  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQ

Query:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL
        DV   D  A AIA+ MP L HL+L  + LS   L+ I EGCP LK L L  C+++
Subjt:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSL

AT4G30640.1 RNI-like superfamily protein1.7e-7552.31Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL
        W+ELT ECL +I SRL+ EQRW GPMLV K W  A  D +L + FDLE RF S P ES  WW+PEFE K+DS LRS V  S G L+ IRIRHC++ SL  
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL

Query:  VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIA
         A+ CPNLEVL IK+CPN+TD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P +YL + P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIA

Query:  KFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWR
        K+M  L+HLE+ +S L+A+ L  +C+GC  L+Y+DL GC+SLT  DI   TS L+NL EI KP+F  P +V    R G+ R
Subjt:  KFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWR

AT5G57900.1 SKP1 interacting partner 11.5e-9558.33Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W     D  L+S FDLEP F+S P ES   WSPEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDS

Query:  SLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEA
        +L   A  CPNL+VL+I+S PN+TD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+H G VP  YL++CPQD D+EA
Subjt:  SLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEA

Query:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L+ ICEGCPKL+YLDLFGCV L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGCCCCATGCT
CGTCTGCAAGCTCTGGCACCGCGCCGCCACCGACTCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGCCCCCACCGAGTCTCCGGCCTGGTGGTCGC
CGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCATTATTCGGATCAGACACTGCTCCGATTCATCTCTCGACCTC
GTCGCTCAAGGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAACATTACCGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGT
AGATATCAGCTACTGTCACGAAATCTCGAACATATCGTTGGCATTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTTCTTTAACAATCTAGATCCTT
CCCAACACAAGGGAATTGTTCCTGACAATTATCTAAATTCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGCCCAACTTGGAGCACCTTGAA
CTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAAACTCAAGTACTTGGATCTGTTTGGGTGTGTGAGTTTGACAAGCCGTGATAT
AGCAAATGCTACATCAAGTCTGCAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACGGAGAGATATGGCCATTGGAGGTTGTATGATG
AGAGATTCCAAACAGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
AAATAACGGAATTGTGGTTTCTTGTATGGCGCGCATCTCATCGAAGAAAAAGATAACTTTTATTATTTTATTTTCATCCTCCACTCCCTCATCTCTTTCAGTTTCACAAA
TTCCTAAAGTCACCTAAGAAATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAG
CGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGCACCGCGCCGCCACCGACTCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGCCCCCACCGA
GTCTCCGGCCTGGTGGTCGCCGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCATTATTCGGATCAGACACTGCT
CCGATTCATCTCTCGACCTCGTCGCTCAAGGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAACATTACCGATAGATCAATGGCTAAGATTGCTCTTGGT
TGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCGAACATATCGTTGGCATTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTT
CTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTTCCTGACAATTATCTAAATTCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGC
CCAACTTGGAGCACCTTGAACTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAAACTCAAGTACTTGGATCTGTTTGGGTGTGTG
AGTTTGACAAGCCGTGATATAGCAAATGCTACATCAAGTCTGCAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACGGAGAGATATGG
CCATTGGAGGTTGTATGATGAGAGATTCCAAACAGATATTTTCCGAATTTGATTCGGTTGCTCTCATAATACTACATGTACAACTGCACTTAAAAACCAAGATTAGCGTT
GTTTTCACAAGTTGTACAGATCTTAATTTACCTGTTCTGTTTCGTGTCTGTTGCAAATTTGTATTGTCTTTTGAACTTGTATGGTGGATTGATGTGGCACAAGGTTTGTA
TAATTTTTAGTTAACAGCATATGGATTTTTCAGGTTTAACCTTGTACATACTCTTCATGTTATTGTTTCCAAGCTTATTGAACCATTTTTCTATATTC
Protein sequenceShow/hide protein sequence
MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL
VAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLE
LGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI