CuGenDBv2

Gene ID	CmUC02G041230
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Lipoxygenase
Genome location	CmU531Chr02:29077060..29077446
RNA-Seq Expression	CmUC02G041230
Synteny	CmUC02G041230
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0031408 - oxylipin biosynthetic process (biological process) GO:0034440 - lipid oxidation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000907 - Lipoxygenase IPR013819 - Lipoxygenase, C-terminal IPR036226 - Lipoxigenase, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0047993.1 putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa]

1.0e-47

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYKND MVHDDIELQSWWKELKEKGH DLKDKPWWPKMETLEEL+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

KAE8652023.1 hypothetical protein Csa_023391 [Cucumis sativus]

3.3e-46

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYK+D MVHDD+ELQSWWKELKEKGH DLKDKPWWPKMETLE L+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

XP_004139356.1 probable linoleate 9S-lipoxygenase 5 [Cucumis sativus]

3.3e-46

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYK+D MVHDD+ELQSWWKELKEKGH DLKDKPWWPKMETLE L+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

XP_008454500.1 PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo]

1.0e-47

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYKND MVHDDIELQSWWKELKEKGH DLKDKPWWPKMETLEEL+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

XP_038890793.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]

5.6e-46

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MA+EDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWV++YCS YYKND++V DDIELQSWWKELKEKGHADLKDKPWWPKM TLEELVETCT IIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BY90 Lipoxygenase

4.0e-42

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        +A+EDSNSPHGL+LLIEDYP+AVDGLEIW AIKTWVQDYCS+YYK+D  +H+D ELQSWWKEL+EKGHAD KD+PWWP+M++L++LVETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

A0A1S3BYA5 Lipoxygenase

4.9e-48

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYKND MVHDDIELQSWWKELKEKGH DLKDKPWWPKMETLEEL+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

A0A1S4E004 Lipoxygenase

4.0e-42

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        +A+EDSNSPHGL+LLIEDYP+AVDGLEIW AIKTWVQDYCS+YYK+D  +H+D ELQSWWKEL+EKGHAD KD+PWWP+M++L++LVETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

A0A5A7U3G4 Lipoxygenase

4.0e-42

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        +A+EDSNSPHGL+LLIEDYP+AVDGLEIW AIKTWVQDYCS+YYK+D  +H+D ELQSWWKEL+EKGHAD KD+PWWP+M++L++LVETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

A0A5D3CRL5 Putative linoleate 9S-lipoxygenase 5

4.9e-48

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAVEDSNSP+GLKLLIEDYPFAVDGLEIWFAIKTWV+DYCS YYKND MVHDDIELQSWWKELKEKGH DLKDKPWWPKMETLEEL+ETCTIIIWI   L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

SwissProt top hits

e value

%identity

Alignment

P09439 Seed linoleate 9S-lipoxygenase-2

9.9e-38

71.58

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIW
        +A++D ++PHGL+LLIEDYP+AVDGLEIW AIKTWVQ+Y S YY  D  V  D ELQ WWKE  EKGH DLKDKPWWPK++T+EELVE CTIIIW
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIW

P14856 Seed linoleate 9S-lipoxygenase-2

3.1e-39

61.11

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL
        MAV+DS+SP+GL+LLIEDYP+AVDGLEIW AIKTWVQDY S YY  D+ + +D ELQ WWKE+ EKGH DLKDKPWWPK++T +ELVE CTIIIW    L
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLIL

Query:  DNIHMEAIFPIGQQQVEDSCLKRVLL
                +P G   +    L R LL
Subjt:  DNIHMEAIFPIGQQQVEDSCLKRVLL

P37831 Linoleate 9S-lipoxygenase 1

4.9e-37

67.71

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        +AVEDS+SPHG++LLIEDYP+AVDGLEIW AIK+WV DYCS+YY +D  +  D ELQ+WWKEL+E GH D K++PWWP+MET +EL+++CT IIWI
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

Q43189 Probable linoleate 9S-lipoxygenase 3

4.9e-37

67.71

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        +AVEDS+SPHG++LLIEDYP+AVDGLEIW AIK+WV DYCS+YY +D  +  D ELQ+WWKEL+E GH D K++PWWP+MET +EL+++CT IIWI
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

Q43191 Probable linoleate 9S-lipoxygenase 5

2.0e-38

68.75

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        +AVEDS+SPHG++LLI+DYP+AVDGLEIW AIK+WV +YC++YYK+D +V  D ELQ+WWKEL+E+GH D KD+PWWPKM+T +EL ++CTIIIWI
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

Arabidopsis top hits

e value

%identity

Alignment

AT1G17420.1 lipoxygenase 3

5.6e-28

53.12

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        MA+ D+  PHGLKLLIEDYP+A DGL +W AI+TWV+ Y   YY N +++  D ELQSW+ E    GHADL+D  WWP++ T+++LV   T +IW+
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

AT1G55020.1 lipoxygenase 1

5.6e-36

62.5

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        MAVED  +PHGL+L I+DYP+AVDGLE+W+AI++WV+DY   +YK +  +  D ELQ+WWKE++E+GH D K +PWWPKM+T EELVE+CTIIIW+
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein

3.1e-26

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        MA EDS++  G++L+I+DYP+A DGL IW AIK  V+ Y  ++Y +   +  D+ELQ+WW E+K KGH D KD+PWWPK+ T ++L +  T +IWI
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein

4.3e-28

54.17

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        MAV D   PHGLKLL+EDYP+A DGL +W AI+TWV+ Y   YY N +++  D ELQ+W+ E    GHAD +D  WWPK+ T+E+LV   T IIW+
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein

3.8e-37

66.67

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Query:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI
        +AVED NS +G+KLLIEDYPFAVDGLEIW AIKTWV +YC++YY ND  V  D E+QSWW EL+ KGH D + + WWP M+T ++L+ETCTIIIWI
Subjt:  MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWI

Sequences

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CDS sequence

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ATGGCAGTTGAAGATTCAAATTCTCCACATGGACTCAAACTCTTAATAGAGGATTATCCATTTGCTGTTGATGGACTTGAGATTTGGTTTGCAATCAAAACATGGGTACA
AGATTATTGCTCTTACTACTACAAGAATGATAGCATGGTTCATGATGACATTGAACTCCAATCATGGTGGAAAGAATTAAAAGAGAAAGGCCATGCTGACTTGAAAGACA
AACCTTGGTGGCCAAAAATGGAAACCCTAGAAGAGTTAGTAGAAACATGCACAATAATCATATGGATTCAGTTAATTTTGGACAATATCCATATGGAGGCTATCTTCCCA
ATAGGCCAACAACAAGTAGAAGATTCATGCCTGAAAAGGGTACTCCTCAATATTTAG

mRNA sequence

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Protein sequence

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MAVEDSNSPHGLKLLIEDYPFAVDGLEIWFAIKTWVQDYCSYYYKNDSMVHDDIELQSWWKELKEKGHADLKDKPWWPKMETLEELVETCTIIIWIQLILDNIHMEAIFP
IGQQQVEDSCLKRVLLNI

CmUC02G041230 (gene) of Watermelon (USVL531) v1 genome