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CmUC03G059010 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC03G059010
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCmU531Chr03:11527368..11527994
RNA-Seq ExpressionCmUC03G059010
SyntenyCmUC03G059010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH01856.1 hypothetical protein Prudu_012247 [Prunus dulcis]3.8e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
BBN69753.1 hypothetical protein Prudu_1155S000100, partial [Prunus dulcis]3.8e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
VVA15366.1 PREDICTED: retrotransposon [Prunus dulcis]3.8e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
XP_034222961.1 uncharacterized protein LOC117633452 isoform X1 [Prunus dulcis]3.8e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
XP_034222962.1 uncharacterized protein LOC117633452 isoform X2 [Prunus dulcis]3.8e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
TrEMBL top hitse value%identityAlignment
A0A4Y1RCY0 Uncharacterized protein1.9e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
A0A4Y1REL1 CCHC-type domain-containing protein1.9e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
A0A5E4EIX9 PREDICTED: retrotransposon1.9e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
A0A5H2XP50 Uncharacterized protein (Fragment)1.9e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
M5Y283 Uncharacterized protein1.9e-0562.5Show/hide
Query:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
        ++K++EFLHL QGSMSV++YE KF ELS FAP+LV+ +E+
Subjt:  DDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCACATGGACGAAAACCTAGAGGAGGCTTAGGCATGCCTACACTTCCCGGCGACGGAGCAAACATGCAGCAAGGAGCGAACCCTCTCATCCCTCCAGAG
GTTCCCTTGGACGACAAGGAAACAGAGTTCCTGCACTTGACCCAAGGTAGCATGTCGGTGATCCAATATGAGAGGAAGTTTACCGAGTTGTCTCATTTTGCTCCC
GACCTGGTTAGTGTCAAAGAGGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCACATGGACGAAAACCTAGAGGAGGCTTAGGCATGCCTACACTTCCCGGCGACGGAGCAAACATGCAGCAAGGAGCGAACCCTCTCATCCCTCCAGAG
GTTCCCTTGGACGACAAGGAAACAGAGTTCCTGCACTTGACCCAAGGTAGCATGTCGGTGATCCAATATGAGAGGAAGTTTACCGAGTTGTCTCATTTTGCTCCC
GACCTGGTTAGTGTCAAAGAGGAGGATTAA
Protein sequenceShow/hide protein sequence
MSPHGRKPRGGLGMPTLPGDGANMQQGANPLIPPEVPLDDKETEFLHLTQGSMSVIQYERKFTELSHFAPDLVSVKEED