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CmUC03G059100 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC03G059100
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionAlanine--tRNA ligase
Genome locationCmU531Chr03:11873171..11874539
RNA-Seq ExpressionCmUC03G059100
SyntenyCmUC03G059100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER49216.1 alanine--tRNA ligase [Striga asiatica]7.6e-1262.12Show/hide
Query:  LHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFG
        LHT   G+   + ++P RPNE  RVVQWN RSSLPSA QRG FFG  VALALM S YSSN ++V G
Subjt:  LHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFG

GER53332.1 crossover junction endodeoxyribonuclease RuvC [Striga asiatica]4.8e-0650.67Show/hide
Query:  SPPVASAAILNPFLIMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSS
        +P ++S    NPF I+  T H   ++QR +EPF  + Q RVV  NL SSLPSA QRG FFGSL+A    +S YSS
Subjt:  SPPVASAAILNPFLIMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSS

KAF5777652.1 hypothetical protein HanXRQr2_Chr12g0538181 [Helianthus annuus]7.9e-0948.45Show/hide
Query:  GIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLVSSGP
        G+E  + ++P  P  QP VVQW  RSSLPSA QR       VA  L  S YSS   MV  V    RI S+++IG   F QLD N+ISTMF   SS P
Subjt:  GIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLVSSGP

TrEMBL top hitse value%identityAlignment
A0A2P2IR80 Uncharacterized protein LOC1074358324.7e-1550Show/hide
Query:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV
        M+HT   GIE  + +EP  P+E  +VVQWN +SSLPSA   G+F     A     SL SSN  +V  V WT  I SI+++ + F SQLD N+ISTMFL  
Subjt:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV

Query:  SSGP
        SSGP
Subjt:  SSGP

A0A2P2NGS7 Uncharacterized protein1.1e-2156.9Show/hide
Query:  LFFTLPAITRQTSIARLSIPFPASPPVASAAI---------------------LNPFLIMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQR
        LF TLPAIT QTSIA LS   P SP V++ +                      L PFL+MLHTL CGIEL + ++PFRP+E   VVQWNLRSSLPSAMQR
Subjt:  LFFTLPAITRQTSIARLSIPFPASPPVASAAI---------------------LNPFLIMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQR

Query:  GYFFGSLVALALMESL
        G F GSL+ALALM SL
Subjt:  GYFFGSLVALALMESL

A0A7C8YFV8 Uncharacterized protein1.3e-3374.29Show/hide
Query:  IMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLL
        +MLHTL CG+ELQR +EPFRP E  +VV WNLRSSLPSAM    FFGS VA  L++SLYSSN  MVF V WTLR LSI   GVCFFSQLDWNMISTMFLL
Subjt:  IMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLL

Query:  VSSGP
        VSSGP
Subjt:  VSSGP

A0A7C9AMD1 Uncharacterized protein6.5e-1755.77Show/hide
Query:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV
        M+ T   G EL R EEP  P E  +VVQWNL SSLPSA   G+F   L+A +L +SL SSN  MVF V WT  I SIL I   FF+QLD N+ISTM    
Subjt:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV

Query:  SSGP
        SSGP
Subjt:  SSGP

A0A7C9APL8 Uncharacterized protein6.5e-1755.77Show/hide
Query:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV
        M+ T   G EL R EEP  P E  +VVQWNL SSLPSA   G+F   L+A +L +SL SSN  MVF V WT  I SIL I   FF+QLD N+ISTM    
Subjt:  MLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFGVFWTLRILSILQIGVCFFSQLDWNMISTMFLLV

Query:  SSGP
        SSGP
Subjt:  SSGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTTCTGAACTCTTCTTCACCCTCCCAGCTATTACTCGGCAAACAAGCATTGCTCGTTTATCAATCCCCTTTCCAGCTTCCCCTCCGGTAGCCTCTGCAGCCAT
CTTGAACCCATTCTTGATTATGCTACACACATTGCATTGTGGGATTGAACTACAGAGGTTTGAAGAGCCATTTAGGCCCAATGAACAACCCAGGGTTGTGCAATGGAACC
TTAGGAGTTCGTTACCGTCTGCTATGCAACGTGGGTATTTCTTTGGAAGCTTGGTGGCTTTGGCTTTGATGGAATCCCTGTATTCCTCGAATTTCGAGATGGTTTTTGGA
GTGTTCTGGACTTTAAGAATCCTTTCAATTTTGCAAATTGGGGTTTGCTTTTTTAGCCAGCTCGATTGGAATATGATTTCCACTATGTTCTTGCTTGTGTCTTCAGGACC
AAGGATGGTAAGGTTAAGTACCTGCATGTCTAACACTCTGGTGAAGCTCCAAAGTTTCAGGTTTCATGAAGATCTCACCACATTCAGGACAAGGGCAAATGGCATTCCCC
TGAAAGAGGAGGCTCCATTGGAGGAATTAGAAGAAGATGATGATGCAGATAATGATGAACATGTAGCTGATACAGTTTGTTCATTCAAAGGAGGAGCTTTGCTGGATCTA
CTTGAACTTGAAGATTCATTGTTTCTGGAAGTCAAAACCCTTTTCTTGTACTTGCAACTGAATATGCCTTTAACAACAGCCCAAGACGGCGGCTTCGGTTTCTGGTTTTC
ATGGCTCTGTCTGCTGAGCTTTCTCTGTATTTTGGGTTTGGCCATGGCAGATGCCATTTCTTCACTGGAAAATCTGAAAAGGCAGGGAAGAAATTCAGGTCAAATAGTAA
ATGAAATGGGATTTTTTTGCTTTTCTTTTTTTCTTCAGGATGTCAAAAGAAGGAATGCACTTCCTCAGCAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTTCTGAACTCTTCTTCACCCTCCCAGCTATTACTCGGCAAACAAGCATTGCTCGTTTATCAATCCCCTTTCCAGCTTCCCCTCCGGTAGCCTCTGCAGCCAT
CTTGAACCCATTCTTGATTATGCTACACACATTGCATTGTGGGATTGAACTACAGAGGTTTGAAGAGCCATTTAGGCCCAATGAACAACCCAGGGTTGTGCAATGGAACC
TTAGGAGTTCGTTACCGTCTGCTATGCAACGTGGGTATTTCTTTGGAAGCTTGGTGGCTTTGGCTTTGATGGAATCCCTGTATTCCTCGAATTTCGAGATGGTTTTTGGA
GTGTTCTGGACTTTAAGAATCCTTTCAATTTTGCAAATTGGGGTTTGCTTTTTTAGCCAGCTCGATTGGAATATGATTTCCACTATGTTCTTGCTTGTGTCTTCAGGACC
AAGGATGGTAAGGTTAAGTACCTGCATGTCTAACACTCTGGTGAAGCTCCAAAGTTTCAGGTTTCATGAAGATCTCACCACATTCAGGACAAGGGCAAATGGCATTCCCC
TGAAAGAGGAGGCTCCATTGGAGGAATTAGAAGAAGATGATGATGCAGATAATGATGAACATGTAGCTGATACAGTTTGTTCATTCAAAGGAGGAGCTTTGCTGGATCTA
CTTGAACTTGAAGATTCATTGTTTCTGGAAGTCAAAACCCTTTTCTTGTACTTGCAACTGAATATGCCTTTAACAACAGCCCAAGACGGCGGCTTCGGTTTCTGGTTTTC
ATGGCTCTGTCTGCTGAGCTTTCTCTGTATTTTGGGTTTGGCCATGGCAGATGCCATTTCTTCACTGGAAAATCTGAAAAGGCAGGGAAGAAATTCAGGTCAAATAGTAA
ATGAAATGGGATTTTTTTGCTTTTCTTTTTTTCTTCAGGATGTCAAAAGAAGGAATGCACTTCCTCAGCAGAATTAG
Protein sequenceShow/hide protein sequence
MLPSELFFTLPAITRQTSIARLSIPFPASPPVASAAILNPFLIMLHTLHCGIELQRFEEPFRPNEQPRVVQWNLRSSLPSAMQRGYFFGSLVALALMESLYSSNFEMVFG
VFWTLRILSILQIGVCFFSQLDWNMISTMFLLVSSGPRMVRLSTCMSNTLVKLQSFRFHEDLTTFRTRANGIPLKEEAPLEELEEDDDADNDEHVADTVCSFKGGALLDL
LELEDSLFLEVKTLFLYLQLNMPLTTAQDGGFGFWFSWLCLLSFLCILGLAMADAISSLENLKRQGRNSGQIVNEMGFFCFSFFLQDVKRRNALPQQN