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CmUC04G070990 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G070990
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCmU531Chr04:12571384..12573857
RNA-Seq ExpressionCmUC04G070990
SyntenyCmUC04G070990
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.0e-1752.58Show/hide
Query:  VINYSKSMF-ISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIPIYTMSRLR
        ++NY KSMF +S+NT   V + I+  L +  +  +GQYLGLPSQ S++KCQVF+N+ +++W+ LQG KEKLF    KEVLI  V QAIP Y+MS  R
Subjt:  VINYSKSMF-ISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIPIYTMSRLR

XP_030923017.1 uncharacterized protein LOC115949892 [Quercus lobata]1.7e-1749.54Show/hide
Query:  VLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIP
        +L  YEHAS Q IN  K ++F S NTH EV + I+  LG+  ++   QYLGLPS + +SK + FS +K++IWK L+G KE+L  +  +E+L+  V QAIP
Subjt:  VLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIP

Query:  IYTMSRLRL
        IYTMS  RL
Subjt:  IYTMSRLRL

XP_030929772.1 uncharacterized protein LOC115955672 [Quercus lobata]8.4e-1748.62Show/hide
Query:  VLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIP
        +L  YEHAS Q IN  K ++F S NTH EV + I+  LG+  ++   QYLGLPS + +SK + FS +K++IWK L+G KE+L  +  +E+L+  V QAIP
Subjt:  VLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIP

Query:  IYTMSRLRL
        I+TMS  RL
Subjt:  IYTMSRLRL

XP_030936294.1 uncharacterized protein LOC115961454 [Quercus lobata]4.6e-1544.64Show/hide
Query:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ
        L ++L TYE AS Q IN +K ++F SK+T ++V   I+EALG+       +YL LPS + + K + F+NLK +IWK LQG + KL     +E+L+  V Q
Subjt:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ

Query:  AIPIYTMSRLRL
        A+P YTMS  +L
Subjt:  AIPIYTMSRLRL

XP_030968750.1 uncharacterized protein LOC115989220 [Quercus lobata]2.1e-1550Show/hide
Query:  LFQVLKTYEHASMQVINYSKS-MFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ
        L ++LK YE AS Q +N  KS +  S NT  E  S++ E LG    T  G+YLGLPS I KSK QVF+ +K+++ K L G KEK+     KE+LI  VTQ
Subjt:  LFQVLKTYEHASMQVINYSKS-MFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ

Query:  AIPIYTMS
         IP YTMS
Subjt:  AIPIYTMS

TrEMBL top hitse value%identityAlignment
A0A2N9G5C3 Uncharacterized protein1.7e-1547.79Show/hide
Query:  VLFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVT
        VL  +LK YE AS Q IN  K + F SKNT   V S+I    G   ++   +YLGLPS + +SK + F+ +KD+IWK LQG KE L  +  +E+LI  V 
Subjt:  VLFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVT

Query:  QAIPIYTMSRLRL
        QAIPIY MS  +L
Subjt:  QAIPIYTMSRLRL

A0A2N9GHD2 CCHC-type domain-containing protein2.2e-1546.36Show/hide
Query:  EVLFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVV
        E L  +L+TYEHAS Q IN  K ++F S NT  +    I    G   +T   +YLGLP  I KSK   F+++KD++W+ LQG KEK+  +  +EVLI  V
Subjt:  EVLFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVV

Query:  TQAIPIYTMS
         QAIP Y MS
Subjt:  TQAIPIYTMS

A0A2N9I946 Uncharacterized protein7.7e-1646.43Show/hide
Query:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ
        L+ +LK YE AS Q IN  K ++F SKNT   + + I    G   S+   +YLGLP  + +SK + F+ +KD+IWK LQG KEKL  +  +E+LI  V Q
Subjt:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ

Query:  AIPIYTMSRLRL
        AIPIY MS  +L
Subjt:  AIPIYTMSRLRL

A0A2N9J936 Uncharacterized protein7.7e-1646.43Show/hide
Query:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ
        L+ +LK YE AS Q IN  K ++F SKNT   + + I    G   S+   +YLGLP  + +SK + F+ +KD+IWK LQG KEKL  +  +E+LI  V Q
Subjt:  LFQVLKTYEHASMQVINYSK-SMFISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQ

Query:  AIPIYTMSRLRL
        AIPIY MS  +L
Subjt:  AIPIYTMSRLRL

A0A6J1CV63 uncharacterized protein LOC1110146624.8e-1852.58Show/hide
Query:  VINYSKSMF-ISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIPIYTMSRLR
        ++NY KSMF +S+NT   V + I+  L +  +  +GQYLGLPSQ S++KCQVF+N+ +++W+ LQG KEKLF    KEVLI  V QAIP Y+MS  R
Subjt:  VINYSKSMF-ISKNTHWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIPIYTMSRLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAAGAGAGAAGAGGGGAGAATCAAACGACCGAAAATAAAACTTGCCCGATTATTAGGCCGCTAGATGCAAAAGATCGCAATGTGTTGAGATTGTTACATTCTCG
ATCTTTCTCAACGTGGGTAGTCACAGACACTTGTGATCATCGAGAGGATTGCATCAAGACCAGGAAATCCTCTTTCACCCTATCTGCTTCTCATATTCGAAAGGTCTTTC
AACCCTTTTTCAAGTGGAGAGAAGAGGTTCTTTTCCAGGTGTTGAAGACATATGAGCATGCCTCTATGCAAGTGATCAACTATAGCAAATCCATGTTTATCAGCAAGAAT
ACCCATTGGGAGGTGTTTAGTAAAATCCAAGAAGCCTTGGGGATTTGTTATTCTACCTCATTAGGTCAATACCTGGGACTACCTTCGCAAATCTCTAAGAGTAAATGTCA
AGTCTTTAGTAATCTTAAGGATCAAATTTGGAAGCTTCTCCAAGGGTCGAAGGAAAAGCTCTTTCCGAGGGACGATAAAGAAGTGCTAATTAATGTCGTGACGCAAGCCA
TACCAATTTATACTATGAGTAGACTTCGTCTGCTTAGGGAGCCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAAGAGAGAAGAGGGGAGAATCAAACGACCGAAAATAAAACTTGCCCGATTATTAGGCCGCTAGATGCAAAAGATCGCAATGTGTTGAGATTGTTACATTCTCG
ATCTTTCTCAACGTGGGTAGTCACAGACACTTGTGATCATCGAGAGGATTGCATCAAGACCAGGAAATCCTCTTTCACCCTATCTGCTTCTCATATTCGAAAGGTCTTTC
AACCCTTTTTCAAGTGGAGAGAAGAGGTTCTTTTCCAGGTGTTGAAGACATATGAGCATGCCTCTATGCAAGTGATCAACTATAGCAAATCCATGTTTATCAGCAAGAAT
ACCCATTGGGAGGTGTTTAGTAAAATCCAAGAAGCCTTGGGGATTTGTTATTCTACCTCATTAGGTCAATACCTGGGACTACCTTCGCAAATCTCTAAGAGTAAATGTCA
AGTCTTTAGTAATCTTAAGGATCAAATTTGGAAGCTTCTCCAAGGGTCGAAGGAAAAGCTCTTTCCGAGGGACGATAAAGAAGTGCTAATTAATGTCGTGACGCAAGCCA
TACCAATTTATACTATGAGTAGACTTCGTCTGCTTAGGGAGCCTTTGTGA
Protein sequenceShow/hide protein sequence
MREERRGENQTTENKTCPIIRPLDAKDRNVLRLLHSRSFSTWVVTDTCDHREDCIKTRKSSFTLSASHIRKVFQPFFKWREEVLFQVLKTYEHASMQVINYSKSMFISKN
THWEVFSKIQEALGICYSTSLGQYLGLPSQISKSKCQVFSNLKDQIWKLLQGSKEKLFPRDDKEVLINVVTQAIPIYTMSRLRLLREPL