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CmUC04G071380 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G071380
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionF-box domain-containing protein
Genome locationCmU531Chr04:14389262..14389594
RNA-Seq ExpressionCmUC04G071380
SyntenyCmUC04G071380
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily
IPR045118 - F-box only protein FBXO9/FBXO48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649458.1 hypothetical protein Csa_018875 [Cucumis sativus]1.8e-3270.64Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSSLWLFRSLETHPFPLRPC
        PWEVLLLVG FLDPKTLAMASCVCKSW IA+AS+HLWEPILA NFPSL N  VSST TS   SF RLF LGH + T  +P   +   RSLET PF LR C
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSSLWLFRSLETHPFPLRPC

Query:  LRRRHDLLP
        LR R+DLLP
Subjt:  LRRRHDLLP

KAG6595690.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2571.08Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASNHLWE I +A FPSL+N+  SS  TS P+SFRRLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

KAG7027654.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2571.08Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASN+LWEPI +A FPSL+N+  SS  TS P+SFRRLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

XP_022925168.1 probable F-box protein At5g04010 [Cucurbita moschata]2.7e-2571.08Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASN+LWEPI +A FPSL+N+  SS  TS P+SFRRLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

XP_023518459.1 probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo]2.7e-2571.08Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASN+LWEPI +A FPSL+N+  SS  TS P+SFRRLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LDE5 F-box domain-containing protein1.0e-2267.47Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEV+LLV E LDPKTLA ASCVCKSWS++MAS+HLWEPI  ANFPSL N + ++  TS  +SFRRLF LG+IA  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

A0A1S3BLJ1 probable F-box protein At5g040102.8e-2369.14Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPS
        PWEV+LLV E LDPKTLA ASCVCKSWS++MAS+HLWEPI  ANFPSL N + S+  +S P+SFRRLF LG+IA  RR P+
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPS

A0A5D3DEJ6 Putative F-box protein2.8e-2369.14Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPS
        PWEV+LLV E LDPKTLA ASCVCKSWS++MAS+HLWEPI  ANFPSL N + S+  +S P+SFRRLF LG+IA  RR P+
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPS

A0A6J1EEG3 probable F-box protein At5g040101.3e-2571.08Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASN+LWEPI +A FPSL+N+  SS  TS P+SFRRLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

A0A6J1HMX9 probable F-box protein At5g040108.6e-2569.88Show/hide
Query:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS
        PWEVLLLV E LDP+TLA ASCVCKSWSI+MASNHLWEPI +A FPSL+N+  SS   S P+SF RLF LGH A  RR P+ S
Subjt:  PWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSS

SwissProt top hitse value%identityAlignment
Q5EAF6 Probable F-box protein At5g040102.0e-0735.06Show/hide
Query:  WEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRR
        WE+L LVG ++DP++LA+ASCV  +WS   +S  LW+ + A      +  I       + +S++RL +    A  RR
Subjt:  WEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRR

Arabidopsis top hitse value%identityAlignment
AT5G04010.1 F-box family protein1.4e-0835.06Show/hide
Query:  WEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRR
        WE+L LVG ++DP++LA+ASCV  +WS   +S  LW+ + A      +  I       + +S++RL +    A  RR
Subjt:  WEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGGGAGGTGCTGCTTCTCGTTGGCGAATTTCTCGACCCCAAAACCCTAGCCATGGCCTCTTGTGTGTGCAAGTCTTGGTCCATTGCCATGGCCTCTAATCACCT
TTGGGAGCCCATTTTAGCTGCTAATTTCCCTTCTCTTTCTAACGTTATCGTCTCCTCTACCAACACATCATCACCTATCTCCTTTCGTCGCCTCTTCAACCTTGGCCACA
TCGCTACCACCCGTCGCCATCCCTCGTCGTCGTTGTGGTTGTTTCGCTCCCTCGAAACCCACCCTTTTCCTCTTCGACCTTGTCTTCGTCGTCGACATGATCTCCTCCCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATGGGAGGTGCTGCTTCTCGTTGGCGAATTTCTCGACCCCAAAACCCTAGCCATGGCCTCTTGTGTGTGCAAGTCTTGGTCCATTGCCATGGCCTCTAATCACCT
TTGGGAGCCCATTTTAGCTGCTAATTTCCCTTCTCTTTCTAACGTTATCGTCTCCTCTACCAACACATCATCACCTATCTCCTTTCGTCGCCTCTTCAACCTTGGCCACA
TCGCTACCACCCGTCGCCATCCCTCGTCGTCGTTGTGGTTGTTTCGCTCCCTCGAAACCCACCCTTTTCCTCTTCGACCTTGTCTTCGTCGTCGACATGATCTCCTCCCT
TGA
Protein sequenceShow/hide protein sequence
MPWEVLLLVGEFLDPKTLAMASCVCKSWSIAMASNHLWEPILAANFPSLSNVIVSSTNTSSPISFRRLFNLGHIATTRRHPSSSLWLFRSLETHPFPLRPCLRRRHDLLP