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CmUC04G073000 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G073000
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRetrotransposon protein
Genome locationCmU531Chr04:18379374..18379643
RNA-Seq ExpressionCmUC04G073000
SyntenyCmUC04G073000
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040609.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]1.3e-1246.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]1.3e-1246.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

TYK05651.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.3e-1246.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-1246.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

XP_038898276.1 uncharacterized protein LOC120085983 isoform X1 [Benincasa hispida]1.1e-1348.31Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MF+ +RP  EG+L + L+ I+QEG Y EY KK  +Y+TP+P  A+ VL+  F+NGL   ++AEV    P  L+ECM +AQ VS++N+AL
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

TrEMBL top hitse value%identityAlignment
A0A5A7T3B8 Retrotransposon protein8.8e-1243.82Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+ S EG+L + L+ I+Q+G+Y +Y KK   Y+ P+P+ A++VL   FI GL   ++AEV   +P+AL++CM +AQ VS+++ A+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

A0A5A7TH70 DNA polymerase epsilon catalytic subunit6.1e-1346.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

A0A5A7V4D8 Disease resistance protein6.1e-1346.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

A0A5D3C142 Retrotransposable element Tf26.1e-1346.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein6.1e-1346.07Show/hide
Query:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL
        MFE F+   EG+L + L+ IKQ+G Y +Y KK   Y+ P+P+ A++VL   F+ GL   ++AEVK  +PV L+ECM +AQ VS+++LA+
Subjt:  MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAAGGTTTCGACCGTCTCAAGAGGGTACACTTCTGTCTGGATTGATGTGGATTAAACAGGAAGGAATGTACGAGGAGTATAGGAAGAAGGTTGAGTCATATGC
GACTCCGATTCCGAAAGCGGCAAAAAACGTGTTACAGAAGGTGTTTATTAATGGGTTGTTGCGGGAAATTAAGGCAGAGGTGAAGTGCAGTAATCCGGTGGCCCTTGATG
AGTGCATGGTGCAAGCCCAAGCTGTGAGCAATCAAAATCTGGCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAAGGTTTCGACCGTCTCAAGAGGGTACACTTCTGTCTGGATTGATGTGGATTAAACAGGAAGGAATGTACGAGGAGTATAGGAAGAAGGTTGAGTCATATGC
GACTCCGATTCCGAAAGCGGCAAAAAACGTGTTACAGAAGGTGTTTATTAATGGGTTGTTGCGGGAAATTAAGGCAGAGGTGAAGTGCAGTAATCCGGTGGCCCTTGATG
AGTGCATGGTGCAAGCCCAAGCTGTGAGCAATCAAAATCTGGCATTGTAG
Protein sequenceShow/hide protein sequence
MFERFRPSQEGTLLSGLMWIKQEGMYEEYRKKVESYATPIPKAAKNVLQKVFINGLLREIKAEVKCSNPVALDECMVQAQAVSNQNLAL