; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC04G073200 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G073200
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationCmU531Chr04:18826188..18829396
RNA-Seq ExpressionCmUC04G073200
SyntenyCmUC04G073200
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54887.2 hypothetical protein Csa_012257 [Cucumis sativus]2.5e-15385.89Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSS SSIDA PD LKDK S VDPFL+EALHNPRHRLTILRME DIQRFLQNQ+ Q+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIAIRPRP+K SD+AGN MAK+S  R+VEQRKEEYDKARARIFSSQGS   V+VL H   EGL I PNRDR 
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKYTS  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI P FT YHVPRNEVSLGYVSPSPIKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPL
        VSR SANV WPCAGMPY HTAFQ  L
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPL

TYK22607.1 R3H domain-containing protein 1-like isoform X1 [Cucumis melo var. makuwa]8.2e-15286.07Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSAS IDAFPD LKDK S+VDPFL+E LHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIA+RP+P+K SDDAGN MAK+S GR+VEQRKEEYDKARARIFSSQ S+ SVDVLSH  TEGL I PNRDRA
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKY S  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI P FT YHVPRNEV LGYVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQ
        +SR+SANV WPCAGMPY H+AFQ
Subjt:  VSRTSANVLWPCAGMPYTHTAFQ

XP_008455743.1 PREDICTED: R3H domain-containing protein 1-like isoform X1 [Cucumis melo]9.6e-16186.43Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSAS IDAFPD LKDK S+VDPFL+E LHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIA+RP+P+K SDDAGN MAK+S GR+VEQRKEEYDKARARIFSSQ S+ SVDVLSH  TEGL I PNRDRA
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKY S  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI P FT YHVPRNEV LGYVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        +SR+SANV WPCAGMPY H+AFQAPLYQQSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

XP_011653850.1 uncharacterized protein LOC101216736 [Cucumis sativus]6.7e-16286.73Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSS SSIDA PD LKDK S VDPFL+EALHNPRHRLTILRME DIQRFLQNQ+ Q+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIAIRPRP+K SD+AGN MAK+S  R+VEQRKEEYDKARARIFSSQGS   V+VL H   EGL I PNRDR 
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKYTS  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI P FT YHVPRNEVSLGYVSPSPIKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        VSR SANV WPCAGMPY HTAFQAPLYQQSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

XP_038883354.1 R3H domain-containing protein 1-like [Benincasa hispida]5.1e-16287.91Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSASSID FPD LKDK S VDPFL+EALHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQT VQDNGIDGQGRILVR
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PTVCLSQIPAKQS+DDKPG VKIAIRPRP+KSSDDAGN MAK+SLGRSVEQRKEEYDKARARIFSSQGST SVDVLS    E LDISPNRDR 
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVN+VEK TS KD GNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPS+NFAPFT+QN+PP F+ YHVPRNE SL YVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        VSR SAN  WPCAGMPYTHTAFQAPLY QSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein3.2e-16286.73Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSS SSIDA PD LKDK S VDPFL+EALHNPRHRLTILRME DIQRFLQNQ+ Q+FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIAIRPRP+K SD+AGN MAK+S  R+VEQRKEEYDKARARIFSSQGS   V+VL H   EGL I PNRDR 
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKYTS  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI P FT YHVPRNEVSLGYVSPSPIKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        VSR SANV WPCAGMPY HTAFQAPLYQQSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

A0A1S3C2A6 R3H domain-containing protein 1-like isoform X14.7e-16186.43Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSAS IDAFPD LKDK S+VDPFL+E LHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIA+RP+P+K SDDAGN MAK+S GR+VEQRKEEYDKARARIFSSQ S+ SVDVLSH  TEGL I PNRDRA
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKY S  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI P FT YHVPRNEV LGYVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        +SR+SANV WPCAGMPY H+AFQAPLYQQSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

A0A5A7SJ76 R3H domain-containing protein 1-like isoform X14.7e-16186.43Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSAS IDAFPD LKDK S+VDPFL+E LHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIA+RP+P+K SDDAGN MAK+S GR+VEQRKEEYDKARARIFSSQ S+ SVDVLSH  TEGL I PNRDRA
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKY S  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI P FT YHVPRNEV LGYVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN
        +SR+SANV WPCAGMPY H+AFQAPLYQQSLSFDY QYN
Subjt:  VSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN

A0A5D3DFX8 R3H domain-containing protein 1-like isoform X14.0e-15286.07Show/hide
Query:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR
        MDSSSAS IDAFPD LKDK S+VDPFL+E LHNPRHRLTILRME DIQRFLQNQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILV+
Subjt:  MDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVR

Query:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA
        KTVEAR PT+CLSQIPAKQ +DDKPGHVKIA+RP+P+K SDDAGN MAK+S GR+VEQRKEEYDKARARIFSSQ S+ SVDVLSH  TEGL I PNRDRA
Subjt:  KTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRA

Query:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ
        E CRVNDVEKY S  DAGNGASSRVAIL+DREKDLSDPDYDRSYERYVKSLPINLTPSLNF PFT QNI P FT YHVPRNEV LGYVSPS IKTVGLNQ
Subjt:  EGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQ

Query:  VSRTSANVLWPCAGMPYTHTAFQ
        +SR+SANV WPCAGMPY H+AFQ
Subjt:  VSRTSANVLWPCAGMPYTHTAFQ

A0A6J1DP27 R3H domain-containing protein 1-like isoform X11.0e-14782.41Show/hide
Query:  DCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARLPTVCLS
        D LKDK SMVDPFLVEAL NPRHRLTILRME DIQ FLQNQE Q+FEFQHF TSYLRLAAHRVAQHYGLQTMVQDN IDGQGRILVRKTVEA+ P +CLS
Subjt:  DCLKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARLPTVCLS

Query:  QIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTS
        QIPAKQS+DD  G VKIA+RPRP+KSSDD    MAK+ LGR+VEQRKEEYDKARARIFSSQGST SVDV SH FTEGLDIS NRDRAEGCRVNDV+KY+S
Subjt:  QIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTS

Query:  AKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQVSRTSANVLWPCA
         KDAG+G +SRVAIL+DREKDLSDPDYDRSY+RYVK+LPIN TPS+NFAPFT+QNI P F  YHVPRN+V L YVSPSPIKTVGLN +SRT+ NV WPCA
Subjt:  AKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQVSRTSANVLWPCA

Query:  GMPYTHTAFQAPLYQQSLSFDYPQ
        GMPYTHTAFQ PLYQQSLSF+Y Q
Subjt:  GMPYTHTAFQAPLYQQSLSFDYPQ

SwissProt top hitse value%identityAlignment
Q15032 R3H domain-containing protein 11.1e-1028.53Show/hide
Query:  ISLTVSLEEEEEEEEEEEEEEEEEVK------SMDSSSASSIDAFPDCLKDKFSMVDPFLVEAL-HNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPT
        I LT S E+EE+  ++E E+E+   K      S DSS   +     D        +  FLV  L +NPR R+ +L++E +I  F+ N E    +F    T
Subjt:  ISLTVSLEEEEEEEEEEEEEEEEEVK------SMDSSSASSIDAFPDCLKDKFSMVDPFLVEAL-HNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPT

Query:  SYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARLPTVCLSQIPAKQSSDDK-PGHVKIAIRPRPSKSSDDAGNGMAKR----SLGRSVEQRK
        SY R+  HRVA ++GL     D+ +D  G+ ++V KT   R+P     Q   +   DDK     K  I  R + S D   N M  R       +S+E+R+
Subjt:  SYLRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARLPTVCLSQIPAKQSSDDK-PGHVKIAIRPRPSKSSDDAGNGMAKR----SLGRSVEQRK

Query:  EEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSAKDAGNGASSRVAILKDRE-KDLSDPDYDRSYERYVKSLPINLTPSL
        EEY +AR RIFS     S  + +     +  D S  + R +  RVN   K  S +   +  SS    LK  E +  S  D D S    +++L   +T + 
Subjt:  EEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSAKDAGNGASSRVAILKDRE-KDLSDPDYDRSYERYVKSLPINLTPSL

Query:  NFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVG-LNQVSRTSANVLWPCAGMPYTHTAFQAPLY------QQSLSFD
        +F+  +V       T      +  S+G +S +  ++ G +   + + +++  P  G   + ++  AP+         SLSFD
Subjt:  NFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVG-LNQVSRTSANVLWPCAGMPYTHTAFQAPLY------QQSLSFD

Q9Y2K5 R3H domain-containing protein 27.7e-0430.5Show/hide
Query:  LWISLTVSLEEEEEEEEEEEEEEEEEVKSMDSSSASSIDAFPDCLKDKFSMVDPFLVEAL-HNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFP--TSY
        L IS     EEE+  ++  E+E++++ K        S D+  +        +  FLV  L  NPR R+ +L++E +I  F+ +  +Q   F+ FP  TSY
Subjt:  LWISLTVSLEEEEEEEEEEEEEEEEEVKSMDSSSASSIDAFPDCLKDKFSMVDPFLVEAL-HNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFP--TSY

Query:  LRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARLP
         R+  HRVA ++G+     D+ +D  G+ +++ KT   R+P
Subjt:  LRLAAHRVAQHYGLQTMVQDNGIDGQGR-ILVRKTVEARLP

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein8.6e-6747.49Show/hide
Query:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARLPTVCLSQ
        + DK   VDPFLVEAL NPRHRLTILRME D+QRFLQ+ + Q FEFQHFPTSYLR AAHRVA HYGL T V+D G DG + RI+V K+ ++R P   LS+
Subjt:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARLPTVCLSQ

Query:  IPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSA
        IP KQS   K  H+K+ I+PRP+K S   G+ + K  L +SVE+RKE+YD+ARARIF+   +    D  S      ++ S +RD  +  +  ++E   + 
Subjt:  IPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSA

Query:  KDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI-PPL----FTSYH-VPRNEVSLGYVS-PSPIKTVGLNQVSRTSAN
            +  +SR+AIL+DREKD  DPDYDRS  RY+ +LP++   +L  A F +Q +  P+    F  Y       ++LG  S  SP  T GLNQ SR +A 
Subjt:  KDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNI-PPL----FTSYH-VPRNEVSLGYVS-PSPIKTVGLNQVSRTSAN

Query:  VL-WP-CAGMPYTH-------TAFQAPLYQQSLSFDYPQ
         + WP  A + YTH       + FQA  Y Q LSFDY Q
Subjt:  VL-WP-CAGMPYTH-------TAFQAPLYQQSLSFDYPQ

AT3G10770.1 Single-stranded nucleic acid binding R3H protein5.4e-6151.9Show/hide
Query:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARLPTVC
        + +K +MVDPFLVEAL NPRHRLTILRME DIQ+F QN E   FEF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+R P VC
Subjt:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARLPTVC

Query:  LSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVD--VLSHAFTEGLDISPNRDRAEGCRVNDV
        LS+IP KQ  + +P   KIAI+PRP + S   G+G   +++L RSVE+RKEEYDKARARIF+S  S+ S D   L     E  +   NR+  E   VN+ 
Subjt:  LSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVD--VLSHAFTEGLDISPNRDRAEGCRVNDV

Query:  EKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLP---INLTPS-LNFAPFTVQNIPPLFTSY--HVPR-NEVSLGYVSP
              +D+G   +SRVAI++DREKD  DPDYDRSY+RYV       + + PS  +F+P  +    P    +  H+PR ++ +L Y  P
Subjt:  EKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLP---INLTPS-LNFAPFTVQNIPPLFTSY--HVPR-NEVSLGYVSP

AT3G10770.2 Single-stranded nucleic acid binding R3H protein2.9e-6252.28Show/hide
Query:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARLPTVC
        + +K +MVDPFLVEAL NPRHRLTILRME DIQ+F QN E   FEF  FPTSYLRLAAHRVAQHYGL TM  DNG    DG   RILV KT E+R P VC
Subjt:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI---DG-QGRILVRKTVEARLPTVC

Query:  LSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVD--VLSHAFTEGLDISPNRDRAEGCRVNDV
        LS+IP KQ  + +P   KIAI+PRP + S   G+G   +++L RSVE+RKEEYDKARARIF+S  S+ S D   L     E  +   NR+  E   VN+ 
Subjt:  LSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVD--VLSHAFTEGLDISPNRDRAEGCRVNDV

Query:  EKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSY--HVPR-NEVSLGYVSP
              +D+G   +SRVAI++DREKD  DPDYDRSY+RYV+ +P       +F+P  +    P    +  H+PR ++ +L Y  P
Subjt:  EKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSY--HVPR-NEVSLGYVSP

AT3G56680.1 Single-stranded nucleic acid binding R3H protein1.6e-6849.55Show/hide
Query:  VDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARLPTVCLSQIP-AKQS
        VDPFLVEALHN RHRLTILRME D+QR LQN E Q FEFQHFPTSYLRLAAHRVA HYGL T VQ++G DG + RILV KT E++ P V LS+IP AKQS
Subjt:  VDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRILVRKTVEARLPTVCLSQIP-AKQS

Query:  SDDKPGHVKIAIRPRPSKSSD-DAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSAKDAGN
         + K    K++I+ RPSK S   AG+    R   RSVE+RKEEYDKAR RIFS     S  D  S       + S +RD  +  +   VE   +     +
Subjt:  SDDKPGHVKIAIRPRPSKSSD-DAGNGMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSAKDAGN

Query:  GASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPL-----FTSYH-VPRNEVSLGYVSPSPIKTVGLNQVSRTSANVLWPCA
        G +SRVAI +DREKD  DPDYDR ++RY++SLP+N   + N  PF +Q IP       FT Y+ +P     LG+  P P   +     +  +  + WP A
Subjt:  GASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPL-----FTSYH-VPRNEVSLGYVSPSPIKTVGLNQVSRTSANVLWPCA

Query:  GMPYTHT-------AFQAPLYQQSLSFDYPQ
         M Y H        + QA   QQ LSFDY Q
Subjt:  GMPYTHT-------AFQAPLYQQSLSFDYPQ

AT5G05100.1 Single-stranded nucleic acid binding R3H protein9.2e-6146.95Show/hide
Query:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVRKTVEARLPTVCLS
        + DK +MVDPFLVEAL NPRHRLTILRME DIQ+F Q+ E Q +EFQ  PTSYLRL AHRVAQHYGL  T ++  G+DG G RIL  KTVE+R P VCLS
Subjt:  LKDKFSMVDPFLVEALHNPRHRLTILRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDNGIDGQG-RILVRKTVEARLPTVCLS

Query:  QIPAKQSS-DDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHA--------FTEGLDISPNRDRAE--
        +IP KQ     +P   KIAI+PRP++ +  +G+G   +++L RSVE+RKEEYDKARARIF+S  S+ S D  + A         ++     P+R+  E  
Subjt:  QIPAKQSS-DDKPGHVKIAIRPRPSKSSDDAGNGM-AKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHA--------FTEGLDISPNRDRAE--

Query:  ---GCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYH------VPRNEVSLGYVSPSP
                DVE+    +D+G   +SRVAI++DREKD  DPDYDR+  RYV+  P    P  NF P       P+   +H      +PR + SL Y  P  
Subjt:  ---GCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKSLPINLTPSLNFAPFTVQNIPPLFTSYH------VPRNEVSLGYVSPSP

Query:  IKTVGLNQVSRTSANVLWPCAGMPYTHT
             LN      +   WP A M Y  T
Subjt:  IKTVGLNQVSRTSANVLWPCAGMPYTHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCTTTAGTGTTGCCAAAGTCAACAACAATCCCTCGGTCTCAAGCCGACACCGAAACTGCTACGAAGTCGGGTCTGTGTTCTTGTGGATTTCTCCACACT
TCTCTCTGGATTTCTCTCACTGTTTCTCTTGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGAAATCAATGGATTCCTCTTCA
GCTTCCTCCATTGATGCCTTTCCAGATTGCCTCAAAGACAAATTCTCAATGGTTGACCCCTTCTTGGTCGAGGCCCTTCACAACCCTCGACACCGTTTAACCATT
CTGCGGATGGAATTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCACCAGGTGTTTGAGTTCCAACACTTTCCTACTTCATACCTTCGACTCGCAGCTCATCGT
GTTGCTCAACACTATGGTCTACAAACTATGGTTCAGGATAATGGCATTGATGGACAAGGGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGACTCCCGACTGTT
TGCTTATCTCAAATACCTGCGAAACAATCATCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCAAGTAAGTCATCTGATGATGCAGGTAAT
GGTATGGCTAAGCGAAGTCTCGGTAGGAGTGTGGAGCAAAGGAAGGAAGAGTATGATAAGGCACGTGCTCGTATATTCAGCAGCCAGGGTAGTACTAGTTCAGTG
GATGTATTGTCCCATGCTTTCACCGAAGGGCTGGATATATCCCCAAACAGAGATAGGGCTGAAGGGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTGCCAAA
GATGCTGGCAATGGGGCTTCTTCTCGGGTTGCCATTTTAAAAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGC
CTTCCAATTAATCTGACTCCGAGCTTGAATTTTGCTCCTTTCACCGTACAAAACATCCCGCCTTTGTTTACCAGTTACCATGTACCAAGAAACGAGGTTTCATTG
GGCTATGTTTCTCCTTCACCTATCAAGACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGTGCTGTGGCCATGTGCAGGGATGCCGTACACACATACT
GCTTTCCAGGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCCGCAATACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCTTTAGTGTTGCCAAAGTCAACAACAATCCCTCGGTCTCAAGCCGACACCGAAACTGCTACGAAGTCGGGTCTGTGTTCTTGTGGATTTCTCCACACT
TCTCTCTGGATTTCTCTCACTGTTTCTCTTGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGAAATCAATGGATTCCTCTTCA
GCTTCCTCCATTGATGCCTTTCCAGATTGCCTCAAAGACAAATTCTCAATGGTTGACCCCTTCTTGGTCGAGGCCCTTCACAACCCTCGACACCGTTTAACCATT
CTGCGGATGGAATTCGATATTCAAAGGTTTTTGCAAAACCAAGAGCACCAGGTGTTTGAGTTCCAACACTTTCCTACTTCATACCTTCGACTCGCAGCTCATCGT
GTTGCTCAACACTATGGTCTACAAACTATGGTTCAGGATAATGGCATTGATGGACAAGGGAGGATTTTGGTGAGGAAAACTGTTGAAGCTAGACTCCCGACTGTT
TGCTTATCTCAAATACCTGCGAAACAATCATCTGATGATAAACCTGGGCACGTTAAAATTGCTATTAGGCCAAGGCCAAGTAAGTCATCTGATGATGCAGGTAAT
GGTATGGCTAAGCGAAGTCTCGGTAGGAGTGTGGAGCAAAGGAAGGAAGAGTATGATAAGGCACGTGCTCGTATATTCAGCAGCCAGGGTAGTACTAGTTCAGTG
GATGTATTGTCCCATGCTTTCACCGAAGGGCTGGATATATCCCCAAACAGAGATAGGGCTGAAGGGTGTAGAGTGAACGATGTAGAGAAGTATACAAGTGCCAAA
GATGCTGGCAATGGGGCTTCTTCTCGGGTTGCCATTTTAAAAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGTTATGAAAGGTATGTTAAGAGC
CTTCCAATTAATCTGACTCCGAGCTTGAATTTTGCTCCTTTCACCGTACAAAACATCCCGCCTTTGTTTACCAGTTACCATGTACCAAGAAACGAGGTTTCATTG
GGCTATGTTTCTCCTTCACCTATCAAGACTGTAGGATTGAATCAGGTATCTAGAACCTCAGCCAATGTGCTGTGGCCATGTGCAGGGATGCCGTACACACATACT
GCTTTCCAGGCTCCATTGTACCAACAGTCTTTGAGTTTTGATTATCCGCAATACAATTGAATACAGCAGTTAGTTAGGGGATAGTTAATTAAAACTGATTTACTC
AGCTAATTATATACTCACTTTGCTGGTTCCAAAACCTCCAATTATAATCAATTGTTTTAAATTGAACTCTTATTCATACTTACTGTCTTTTCTAATGTTGATTAT
TGAGTGTCTTTCTTGGTCA
Protein sequenceShow/hide protein sequence
MVSLVLPKSTTIPRSQADTETATKSGLCSCGFLHTSLWISLTVSLEEEEEEEEEEEEEEEEEVKSMDSSSASSIDAFPDCLKDKFSMVDPFLVEALHNPRHRLTI
LRMEFDIQRFLQNQEHQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRKTVEARLPTVCLSQIPAKQSSDDKPGHVKIAIRPRPSKSSDDAGN
GMAKRSLGRSVEQRKEEYDKARARIFSSQGSTSSVDVLSHAFTEGLDISPNRDRAEGCRVNDVEKYTSAKDAGNGASSRVAILKDREKDLSDPDYDRSYERYVKS
LPINLTPSLNFAPFTVQNIPPLFTSYHVPRNEVSLGYVSPSPIKTVGLNQVSRTSANVLWPCAGMPYTHTAFQAPLYQQSLSFDYPQYN