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CmUC04G073210 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G073210
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionFlocculation protein FLO11-like
Genome locationCmU531Chr04:18891713..18892854
RNA-Seq ExpressionCmUC04G073210
SyntenyCmUC04G073210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036711.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]4.0e-1453.33Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS
        RK+P NI+     GIS H +E+V RWKYV+Q RI DE  + ++   CL  M  +  VGL KT  NV  +YPQLI EFI NLP  FNDPSS
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS

KAA0036824.1 uncharacterized protein E6C27_scaffold20G001240 [Cucumis melo var. makuwa]4.0e-1453.41Show/hide
Query:  HRKIPR-NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL
        H  IP   I GIS H +ENV RWK+V+Q RIADE  +  +   C+  M+ I+  GL KT+ NV  +YPQLI EFI NLP  FN+PSSL
Subjt:  HRKIPR-NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]4.0e-1452.22Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS
        +KIP NI      GIS H +ENV RWK+V+Q RIADE  + ++   C+  M  I   GL KT+ +V  +YPQLI EFI NLP  FNDPSS
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS

XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]5.4e-1941.1Show/hide
Query:  SHATKLSHSASMDATCSLSTQAKTARRSYVLDFNPSHQSSSEDDIALPYP--YSRGCHRKIPRN-----IVGISIHTKENVLRWKYVLQCRIADEKVMLE
        S  +  S S S+D+    S Q                +SSSEDD+A+     Y+R   RKIP N     I  IS H+++NV RWK+V+Q  I DEK   +
Subjt:  SHATKLSHSASMDATCSLSTQAKTARRSYVLDFNPSHQSSSEDDIALPYP--YSRGCHRKIPRN-----IVGISIHTKENVLRWKYVLQCRIADEKVMLE

Query:  QTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSLTIKRFMC-GVCAFL
        QT  CL+ M+ + HVGLLKTVVN+  +YPQL+ E I NLP+ F+DP++   K+    G C F+
Subjt:  QTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSLTIKRFMC-GVCAFL

XP_038904484.1 uncharacterized protein LOC120090854 [Benincasa hispida]7.7e-1838.29Show/hide
Query:  ILADVPTNVATDVGDMSAHNNPTSSNHPRVSSLKDVAPDHSLCSPADEDHSVSVDVSLNGSNADDVPIASLRKSHATKLSHSASMDATCSLSTQAKTARR
        I+A   TN  TDV D    ++    N P +SSL   A    LC+ +D+    S  V+ NG ++               +S S+S   T  + T  K  ++
Subjt:  ILADVPTNVATDVGDMSAHNNPTSSNHPRVSSLKDVAPDHSLCSPADEDHSVSVDVSLNGSNADDVPIASLRKSHATKLSHSASMDATCSLSTQAKTARR

Query:  SYVLDFNPSHQ---SSSEDDIALPYPYSR---GCHRKIPR----NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNV
        S   DF+PS Q    S+E+DIA     +R   G H+  P     +I GIS H+++NVLRWKYV+Q RIA+E V+  QT  CL+ M+ +  V LLKT+V++
Subjt:  SYVLDFNPSHQ---SSSEDDIALPYPYSR---GCHRKIPR----NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNV

Query:  DLYYPQLIHEFIANLPTGFNDP
        D +Y QL+ EFI  LP+ FNDP
Subjt:  DLYYPQLIHEFIANLPTGFNDP

TrEMBL top hitse value%identityAlignment
A0A1S3CDC6 uncharacterized protein LOC1034991434.3e-1450.55Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL
        +KIP NI      GIS H +E+V  WK+V+Q RIADE  + ++   C+  M+ I   GL KT+ NV  +YPQLI EFI N P  FNDPSSL
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL

A0A5A7SZY3 Reverse transcriptase Ty1/copia-type domain-containing protein1.9e-1453.41Show/hide
Query:  HRKIPR-NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL
        H  IP   I GIS H +ENV RWK+V+Q RIADE  +  +   C+  M+ I+  GL KT+ NV  +YPQLI EFI NLP  FN+PSSL
Subjt:  HRKIPR-NIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL

A0A5A7VFF7 Uncharacterized protein1.9e-1452.22Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS
        +KIP NI      GIS H +ENV RWK+V+Q RIADE  + ++   C+  M  I   GL KT+ +V  +YPQLI EFI NLP  FNDPSS
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS

A0A5D3BZR7 Cell wall protein RBR3-like1.9e-1453.33Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS
        RK+P NI+     GIS H +E+V RWKYV+Q RI DE  + ++   CL  M  +  VGL KT  NV  +YPQLI EFI NLP  FNDPSS
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS

A0A5D3DR14 Uncharacterized protein4.3e-1450.55Show/hide
Query:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL
        +KIP NI      GIS H +E+V  WK+V+Q RIADE  + ++   C+  M+ I   GL KT+ NV  +YPQLI EFI N P  FNDPSSL
Subjt:  RKIPRNIV-----GISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCATCTCGCCGAATTAGAGCTGAATCTGTTGATTCTTCCCATGTTGTTCCTCATTCTGAAGACATCATAGAGGTAAACCCTCTTGCGATGATTGTCTGG
TCTAGTAATAGGGAGTCTTCTATCCCTTTCACGTCTCAGAGTTGTTTGGTTGATGATATGTTGTGTGCTTCTGATTCTCCTCATTCGTCTGTGCATGTTGAATCG
CTTGTGTTTGAAAAGGAATATGATGTTGTGCATGATTCTGTGACTGTTGATGATCATATGAACGCTGATGTTGAGTGTCCTTTCGCTGTTGAAATTCTGGCTGAT
GTTCCTACTAATGTTGCTACTGATGTTGGCGACATGTCTGCTCATAATAATCCTACCTCTTCTAACCACCCTCGTGTATCCTCTCTTAAGGATGTTGCACCTGAT
CACTCTCTCTGCTCCCCCGCTGATGAAGATCATTCTGTCTCTGTGGATGTCTCCCTGAATGGTTCTAATGCTGACGATGTTCCAATTGCTTCTCTTCGAAAATCT
CATGCTACCAAGTTATCTCACTCCGCTTCTATGGATGCCACTTGTTCTCTCTCCACCCAGGCTAAGACTGCCAGGCGATCTTATGTGTTGGATTTCAACCCCTCT
CATCAGTCTAGTTCTGAAGATGATATTGCCTTGCCTTATCCTTATTCTCGTGGTTGCCATCGAAAAATCCCTCGCAATATTGTTGGAATTTCTATTCATACTAAG
GAGAATGTTTTACGTTGGAAGTATGTTCTCCAATGTCGCATTGCTGATGAGAAAGTCATGTTAGAGCAAACAACTGGTTGTTTAGAACATATGGAATTTATTTAT
CATGTTGGGCTATTAAAAACTGTTGTAAATGTAGACTTGTACTATCCTCAATTGATTCATGAGTTTATTGCCAATCTTCCTACTGGCTTTAATGACCCTAGCAGT
CTGACTATTAAAAGGTTCATGTGCGGGGTGTGTGCTTTTTTGTTTCTCCTGCAACTATTAATACCTTTTTGGATCGTGCTGCTTCTTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCATCTCGCCGAATTAGAGCTGAATCTGTTGATTCTTCCCATGTTGTTCCTCATTCTGAAGACATCATAGAGGTAAACCCTCTTGCGATGATTGTCTGG
TCTAGTAATAGGGAGTCTTCTATCCCTTTCACGTCTCAGAGTTGTTTGGTTGATGATATGTTGTGTGCTTCTGATTCTCCTCATTCGTCTGTGCATGTTGAATCG
CTTGTGTTTGAAAAGGAATATGATGTTGTGCATGATTCTGTGACTGTTGATGATCATATGAACGCTGATGTTGAGTGTCCTTTCGCTGTTGAAATTCTGGCTGAT
GTTCCTACTAATGTTGCTACTGATGTTGGCGACATGTCTGCTCATAATAATCCTACCTCTTCTAACCACCCTCGTGTATCCTCTCTTAAGGATGTTGCACCTGAT
CACTCTCTCTGCTCCCCCGCTGATGAAGATCATTCTGTCTCTGTGGATGTCTCCCTGAATGGTTCTAATGCTGACGATGTTCCAATTGCTTCTCTTCGAAAATCT
CATGCTACCAAGTTATCTCACTCCGCTTCTATGGATGCCACTTGTTCTCTCTCCACCCAGGCTAAGACTGCCAGGCGATCTTATGTGTTGGATTTCAACCCCTCT
CATCAGTCTAGTTCTGAAGATGATATTGCCTTGCCTTATCCTTATTCTCGTGGTTGCCATCGAAAAATCCCTCGCAATATTGTTGGAATTTCTATTCATACTAAG
GAGAATGTTTTACGTTGGAAGTATGTTCTCCAATGTCGCATTGCTGATGAGAAAGTCATGTTAGAGCAAACAACTGGTTGTTTAGAACATATGGAATTTATTTAT
CATGTTGGGCTATTAAAAACTGTTGTAAATGTAGACTTGTACTATCCTCAATTGATTCATGAGTTTATTGCCAATCTTCCTACTGGCTTTAATGACCCTAGCAGT
CTGACTATTAAAAGGTTCATGTGCGGGGTGTGTGCTTTTTTGTTTCTCCTGCAACTATTAATACCTTTTTGGATCGTGCTGCTTCTTCTCTAA
Protein sequenceShow/hide protein sequence
MRSSRRIRAESVDSSHVVPHSEDIIEVNPLAMIVWSSNRESSIPFTSQSCLVDDMLCASDSPHSSVHVESLVFEKEYDVVHDSVTVDDHMNADVECPFAVEILAD
VPTNVATDVGDMSAHNNPTSSNHPRVSSLKDVAPDHSLCSPADEDHSVSVDVSLNGSNADDVPIASLRKSHATKLSHSASMDATCSLSTQAKTARRSYVLDFNPS
HQSSSEDDIALPYPYSRGCHRKIPRNIVGISIHTKENVLRWKYVLQCRIADEKVMLEQTTGCLEHMEFIYHVGLLKTVVNVDLYYPQLIHEFIANLPTGFNDPSS
LTIKRFMCGVCAFLFLLQLLIPFWIVLLLL