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CmUC04G073390 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G073390
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein Ycf2-like
Genome locationCmU531Chr04:19244210..19247594
RNA-Seq ExpressionCmUC04G073390
SyntenyCmUC04G073390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035754.1 protein Ycf2-like [Cucumis melo var. makuwa]4.5e-0838.78Show/hide
Query:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        Y +G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+ S++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0636.84Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        G F+FP+LAWAYEVI TLS+  NF   +++  +PRI                       LE+  ++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

KAA0048518.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0634.4Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIERELGNREC
        G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       L++  ++AT  E+ M YF PFI  E+ + +E E EL     
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIERELGNREC

Query:  AYVDKLDDAINSVISSIDQSKVYED
            K  D I ++       KV ED
Subjt:  AYVDKLDDAINSVISSIDQSKVYED

KAA0050200.1 protein Ycf2-like [Cucumis melo var. makuwa]1.7e-0738.95Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+ S++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]1.1e-0636.73Show/hide
Query:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        Y +G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+  ++AT +E+ M +F PF   E+ + +E E EL
Subjt:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

TrEMBL top hitse value%identityAlignment
A0A5A7SWP9 Protein Ycf2-like2.2e-0838.78Show/hide
Query:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        Y +G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+ S++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

A0A5A7TZZ0 Protein Ycf2-like9.2e-0734.4Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIERELGNREC
        G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       L++  ++AT  E+ M YF PFI  E+ + +E E EL     
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIERELGNREC

Query:  AYVDKLDDAINSVISSIDQSKVYED
            K  D I ++       KV ED
Subjt:  AYVDKLDDAINSVISSIDQSKVYED

A0A5A7U047 Protein Ycf2-like9.2e-0736.84Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        G F+FP+LAWAYEVI TLS+  NF   +++  +PRI                       LE+  ++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

A0A5A7U4J7 Protein Ycf2-like8.3e-0838.95Show/hide
Query:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+ S++AT +E+ M +F PFI  E+ + +E E EL
Subjt:  GRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

A0A5D3DHZ2 Protein Ycf2-like5.4e-0736.73Show/hide
Query:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL
        Y +G F+FP+LAWAYEVI TLS+  NF A +++  +PRI                       LE+  ++AT +E+ M +F PF   E+ + +E E EL
Subjt:  YQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRI-----------------------LEIFSLIATEEEMSMSYFQPFIAEEEALRREIEREL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAAGGCATTGCATAGTAAGGGAGCTACTGAAATATCAATGGGGGAGGTTTGTGTTTCCCTTGCTAGCATGGGCATACGAGGTAATCTCAACCCTAAGC
TCTCTAGAAAATTTCATTGCAAGAAAAATGAACCAACGGATTCCAAGGATCTTGGAAATTTTTTCCCTAATAGCGACTGAGGAAGAAATGAGTATGTCATACTTT
CAACCCTTCATAGCTGAAGAAGAAGCACTTAGAAGAGAAATTGAAAGGGAGTTGGGAAATAGGGAATGTGCCTATGTGGATAAGTTAGATGACGCAATCAACAGT
GTAATCAGTTCAATTGACCAAAGTAAAGTGTATGAGGATTTTAAATATAGCTTAAAAGGAAATGCTATTGTAAAGGAACATGCACCTACATACACGCACGTTGAT
AAAATTACTAAGTCAATTGTTAATGGGCTAACGTTGTTGCATGAGTATGGAAGCATCTTAGTTGTTAAAGGGGATAGGGTCCTAGCAGATCCACATCATCTGCAC
TTGTTCCTTGATGCTGGCTCCCTACAAGATAACAACCTCTTTTTCTTTGGTCTTCCAGTTGGTCGTTTAGAATTGGGTGGGAGAATAGCATCTCCATTCAAAGAA
GTTAAAGTGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAAGGCATTGCATAGTAAGGGAGCTACTGAAATATCAATGGGGGAGGTTTGTGTTTCCCTTGCTAGCATGGGCATACGAGGTAATCTCAACCCTAAGC
TCTCTAGAAAATTTCATTGCAAGAAAAATGAACCAACGGATTCCAAGGATCTTGGAAATTTTTTCCCTAATAGCGACTGAGGAAGAAATGAGTATGTCATACTTT
CAACCCTTCATAGCTGAAGAAGAAGCACTTAGAAGAGAAATTGAAAGGGAGTTGGGAAATAGGGAATGTGCCTATGTGGATAAGTTAGATGACGCAATCAACAGT
GTAATCAGTTCAATTGACCAAAGTAAAGTGTATGAGGATTTTAAATATAGCTTAAAAGGAAATGCTATTGTAAAGGAACATGCACCTACATACACGCACGTTGAT
AAAATTACTAAGTCAATTGTTAATGGGCTAACGTTGTTGCATGAGTATGGAAGCATCTTAGTTGTTAAAGGGGATAGGGTCCTAGCAGATCCACATCATCTGCAC
TTGTTCCTTGATGCTGGCTCCCTACAAGATAACAACCTCTTTTTCTTTGGTCTTCCAGTTGGTCGTTTAGAATTGGGTGGGAGAATAGCATCTCCATTCAAAGAA
GTTAAAGTGACCTGA
Protein sequenceShow/hide protein sequence
MFKRHCIVRELLKYQWGRFVFPLLAWAYEVISTLSSLENFIARKMNQRIPRILEIFSLIATEEEMSMSYFQPFIAEEEALRREIERELGNRECAYVDKLDDAINS
VISSIDQSKVYEDFKYSLKGNAIVKEHAPTYTHVDKITKSIVNGLTLLHEYGSILVVKGDRVLADPHHLHLFLDAGSLQDNNLFFFGLPVGRLELGGRIASPFKE
VKVT