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CmUC04G078100 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G078100
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRibosomal protein S24/S35, mitochondrial
Genome locationCmU531Chr04:24597269..24599083
RNA-Seq ExpressionCmUC04G078100
SyntenyCmUC04G078100
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019929.1 hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-5373.62Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL
        MKRAIWGAVF  CSR +S+SP L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT ENKDSLV+DD+S EELK KI++FYEGD++SLP IFEAIL
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL

Query:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI
        KRKLSGKH D D+ELMKEIR++MPG+VEDFKDE Y SDLS ELNE+DEE ++ S  EEEDRR+
Subjt:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI

XP_008461340.1 PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]2.0e-5375.62Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR
        MKRA+WGAVFNVCSRTLSVSPPLRTFRS PLLS FSV TLRCYSSGNDKYN LNST  +NKDSLV+DDVSTEELK KI+KFYE GD DSLP IFEAILKR
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR

Query:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI
        KLSGKHED D+ELMKEIR++MPG++EDFK E Y S+L++        + +SD EEED+RI
Subjt:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI

XP_022924024.1 uncharacterized protein LOC111431572 [Cucurbita moschata]1.2e-5374.85Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL
        MKRAIWGAVF  CSR +S+SP L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT ENKDSLV+DDVS EELK KI++FYEGDV+SLPTIFEAIL
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL

Query:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI
        KRKLSGKH D D+ELMKEIR+++PG+VEDFKDE Y SDLS ELNE+DEE ++ S  EEEDRR+
Subjt:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]1.4e-5476.07Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTL---RCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL
        MKRAIWGAVF VCSR +S+SP L+T RSGPLL  FSV      RCYS+GNDKYNGLNSTT ENKDSLV+DDVS EELK KI++FYEGDV+SLPTIFEAIL
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTL---RCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL

Query:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI
        KRKLSGKH D D+ELMKEIR++MPG+VEDFKDE Y SDLS ELNETDEE E+    EEEDRR+
Subjt:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI

XP_038894045.1 uncharacterized protein LOC120082798 [Benincasa hispida]1.1e-5679.63Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAILKRK
        MKRA+ GAVFNV SRTLSVSPPLRTFRSG LLS FS  +LR YSSGNDKYNGLNST  +NKDSL+EDDVSTEELK KI+KFYEGDV+SLPTIFEAILKRK
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAILKRK

Query:  LSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETE---DSSDYEEEDRRI
        LSGKHEDDD+E+MKEIR++MPGQVED   E Y SDLSELNET EE E   DSSD E+EDRR+
Subjt:  LSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETE---DSSDYEEEDRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LT17 Uncharacterized protein2.9e-5075.16Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR
        MKRA+WGAVF+V S TLSVSPPLRTFRS PLLS FSV TLR YSSGNDKYN LNST  +NKDSLV+DDVSTEELK KI+KFYE GD DSLP IFEAILKR
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR

Query:  KLSGKHEDDDNELMKEIREQMPGQVEDFK-DEVYGSDLSELNETDEETEDSSDYEEEDRRI
        KLSGKHED D+ELMKEIR+Q+PG+VEDFK +E Y SDL +    D+ ++ S D EEEDRRI
Subjt:  KLSGKHEDDDNELMKEIREQMPGQVEDFK-DEVYGSDLSELNETDEETEDSSDYEEEDRRI

A0A1S3CEX3 uncharacterized protein LOC1034999299.7e-5475.62Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR
        MKRA+WGAVFNVCSRTLSVSPPLRTFRS PLLS FSV TLRCYSSGNDKYN LNST  +NKDSLV+DDVSTEELK KI+KFYE GD DSLP IFEAILKR
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR

Query:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI
        KLSGKHED D+ELMKEIR++MPG++EDFK E Y S+L++        + +SD EEED+RI
Subjt:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI

A0A5D3BIA4 Uncharacterized protein9.7e-5475.62Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR
        MKRA+WGAVFNVCSRTLSVSPPLRTFRS PLLS FSV TLRCYSSGNDKYN LNST  +NKDSLV+DDVSTEELK KI+KFYE GD DSLP IFEAILKR
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYE-GDVDSLPTIFEAILKR

Query:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI
        KLSGKHED D+ELMKEIR++MPG++EDFK E Y S+L++        + +SD EEED+RI
Subjt:  KLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI

A0A6J1E804 uncharacterized protein LOC1114315725.7e-5474.85Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL
        MKRAIWGAVF  CSR +S+SP L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT ENKDSLV+DDVS EELK KI++FYEGDV+SLPTIFEAIL
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL

Query:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI
        KRKLSGKH D D+ELMKEIR+++PG+VEDFKDE Y SDLS ELNE+DEE ++ S  EEEDRR+
Subjt:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDRRI

A0A6J1KP40 uncharacterized protein LOC1114952363.5e-5174.53Show/hide
Query:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL
        MKRAIWGAVF  CSR +S+ P L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT ENKDSLV+D VS EELK KI++FYEGDV+SLPTIFEAIL
Subjt:  MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSV---LTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAIL

Query:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDR
        KRKLSGKH D D+ELMKEI ++MPG+VEDFKDE Y SDLS +LNETDEE E+ S  EEEDR
Subjt:  KRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLS-ELNETDEETEDSSDYEEEDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown6.7e-0731.78Show/hide
Query:  NSTTNENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEAILKRKLSGKHEDDDNELMKEIREQMPG---QVEDFKDEVYGSDLSELNETDEETEDS
        +S ++ ++    E+ +S EELK +I  F  +G+ D++P +FEA++ RKLSGKH+D D+E+M  +R+       +V+D   ++      + +++D E++D 
Subjt:  NSTTNENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEAILKRKLSGKHEDDDNELMKEIREQMPG---QVEDFKDEVYGSDLSELNETDEETEDS

Query:  SDYEEED
         D +  D
Subjt:  SDYEEED

AT1G73770.2 FUNCTIONS IN: molecular_function unknown6.7e-0731.78Show/hide
Query:  NSTTNENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEAILKRKLSGKHEDDDNELMKEIREQMPG---QVEDFKDEVYGSDLSELNETDEETEDS
        +S ++ ++    E+ +S EELK +I  F  +G+ D++P +FEA++ RKLSGKH+D D+E+M  +R+       +V+D   ++      + +++D E++D 
Subjt:  NSTTNENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEAILKRKLSGKHEDDDNELMKEIREQMPG---QVEDFKDEVYGSDLSELNETDEETEDS

Query:  SDYEEED
         D +  D
Subjt:  SDYEEED

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial5.3e-1236.75Show/hide
Query:  NVCSRTLSVSPPLRTFRSGPLLSRFSVLT------LRCYSSGNDKYNGLNSTT--------NENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEA
        ++C+R + +SP + T +  P +   + +        R +SS     +G NSTT        +  K  LV +DVS +ELKS+I K++ EG+ D+LP + EA
Subjt:  NVCSRTLSVSPPLRTFRSGPLLSRFSVLT------LRCYSSGNDKYNGLNSTT--------NENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEA

Query:  ILKRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR
        +L+R+L  KH + D+EL+++I E +P + +D KDE + SD  E + TDEE ED   S +Y  E  R
Subjt:  ILKRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial5.3e-1236.75Show/hide
Query:  NVCSRTLSVSPPLRTFRSGPLLSRFSVLT------LRCYSSGNDKYNGLNSTT--------NENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEA
        ++C+R + +SP + T +  P +   + +        R +SS     +G NSTT        +  K  LV +DVS +ELKS+I K++ EG+ D+LP + EA
Subjt:  NVCSRTLSVSPPLRTFRSGPLLSRFSVLT------LRCYSSGNDKYNGLNSTT--------NENKDSLVEDDVSTEELKSKINKFY-EGDVDSLPTIFEA

Query:  ILKRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR
        +L+R+L  KH + D+EL+++I E +P + +D KDE + SD  E + TDEE ED   S +Y  E  R
Subjt:  ILKRKLSGKHEDDDNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial2.4e-1238.56Show/hide
Query:  VCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNS--TTNENKDSLVEDDVSTEELKSKINK-FYEGDVDSLPTIFEAILKRKLSGKHEDD
        + S  +S + P  T  + P   +F   +     SG +      S  T + +K  LV +DVS +ELKS+I+K F EG+ D+LP + EA+L+R+L  KH + 
Subjt:  VCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNS--TTNENKDSLVEDDVSTEELKSKINK-FYEGDVDSLPTIFEAILKRKLSGKHEDD

Query:  DNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR
        D+ELM++I E +P + +D KDE + SD  E + TDEE ED   S +Y  E  R
Subjt:  DNELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETED---SSDYEEEDRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGCTATATGGGGAGCTGTCTTCAATGTTTGTTCTCGAACACTTTCAGTCTCTCCTCCGCTACGAACCTTTCGCTCTGGTCCCTTACTGTCTCGATTTTCCGT
TTTGACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGGATTGAACTCAACCACGAATGAAAACAAGGATTCTCTCGTTGAAGATGATGTCAGTACCGAAGAGC
TGAAGAGTAAAATTAATAAATTTTACGAGGGTGATGTCGATTCATTACCAACAATTTTTGAAGCAATTTTGAAAAGGAAGCTATCGGGTAAACATGAAGATGATGATAAT
GAACTGATGAAAGAAATTCGAGAGCAAATGCCTGGACAAGTTGAAGATTTTAAAGATGAAGTCTATGGTTCAGATTTAAGTGAGTTGAATGAAACTGATGAAGAAACGGA
GGATTCCAGTGATTATGAGGAAGAAGATAGAAGAATATAA
mRNA sequenceShow/hide mRNA sequence
CATCTCTCCGGTCATAAACCCGAGAAAATGGGGCTAAACCCTAGAACTGTAAAGAAACGCCATGAAACGAGCTATATGGGGAGCTGTCTTCAATGTTTGTTCTCGAACAC
TTTCAGTCTCTCCTCCGCTACGAACCTTTCGCTCTGGTCCCTTACTGTCTCGATTTTCCGTTTTGACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGGATTG
AACTCAACCACGAATGAAAACAAGGATTCTCTCGTTGAAGATGATGTCAGTACCGAAGAGCTGAAGAGTAAAATTAATAAATTTTACGAGGGTGATGTCGATTCATTACC
AACAATTTTTGAAGCAATTTTGAAAAGGAAGCTATCGGGTAAACATGAAGATGATGATAATGAACTGATGAAAGAAATTCGAGAGCAAATGCCTGGACAAGTTGAAGATT
TTAAAGATGAAGTCTATGGTTCAGATTTAAGTGAGTTGAATGAAACTGATGAAGAAACGGAGGATTCCAGTGATTATGAGGAAGAAGATAGAAGAATATAAGTTATGTTG
ATAACGTGAGTTCGATAGAGTCCATACTTGTTTGATGTTAGATCTTACATTTTTGGGTGAAAATTTTCAACTTTTAACATCTTATTTAGTTTGAAATCTTTTGATTCATT
TTAACTCAGAGGAACACATCAGATGATCATGGTTTGATCTACGGGCACTCGAACCCCAGCTTGAGGAACTTTGTTGAATGGAAAATTGTATGCTATACGTCTTTTAAATG
CTAATATTTGGATTTATAACATTAGCATGGCCACAGCCAGAGATTTGGAG
Protein sequenceShow/hide protein sequence
MKRAIWGAVFNVCSRTLSVSPPLRTFRSGPLLSRFSVLTLRCYSSGNDKYNGLNSTTNENKDSLVEDDVSTEELKSKINKFYEGDVDSLPTIFEAILKRKLSGKHEDDDN
ELMKEIREQMPGQVEDFKDEVYGSDLSELNETDEETEDSSDYEEEDRRI