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CmUC04G078690 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC04G078690
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationCmU531Chr04:25193646..25194113
RNA-Seq ExpressionCmUC04G078690
SyntenyCmUC04G078690
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]3.3e-2468.37Show/hide
Query:  GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPY
        G  R  E AAEMVEEWK+MI+  CVSSAIGIATVSV I+TELPN+FQ LSI VLLCF  V F +M  SI F+ +SKILYCVGG L  ++ FIATAIPY
Subjt:  GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPY

KAE8652532.1 hypothetical protein Csa_023780, partial [Cucumis sativus]1.5e-0875.93Show/hide
Query:  LWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQI
        LWESLK E         GGRKL  AAEMVEEWKEMIVALCVSSA+GIATVSVQI
Subjt:  LWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3765Show/hide
Query:  WVGNWIRKACSLWESLKE--EGGG------RKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQR
        W  N I KA  LWE L++  EGGG          AAAEMVEEWK+MIVA CVSSAI IATVSVQIE +LP  F FLS+ +LLCFGFV FGKMTKSI  +R
Subjt:  WVGNWIRKACSLWESLKE--EGGG------RKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQR

Query:  VSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL
        VS+ILYCVGG LGVTA FIA+AIPY+ YFQ IIFL+YLIF  + ML+    + SSSS PL
Subjt:  VSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1748.78Show/hide
Query:  EEGGGRKLE----AAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIAT
        EE G  + +    +A EM+ +W+ M+V  C+ +AI IATVSVQI+T+L   FQFLS  ++ CF F    K+   I  QRVS ILY +GGF  VTAFFIA 
Subjt:  EEGGGRKLE----AAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIAT

Query:  AIPYSPYFQFIIFLLYLIFCFVS
        AIPY+ +FQ +   LYL+F F++
Subjt:  AIPYSPYFQFIIFLLYLIFCFVS

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]9.5e-1660.92Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKIL
        ++W      G  R LE  AEMVEE KEMI+  C+SSAIGIATVSVQ +T+LPN+FQFLSI VL+CF  VGF +M  SI F+ +SKIL
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein2.1e-3260.28Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF
        ++W      G  R LE  AEMVEE KEMI+  C+SSAIGIATVSVQ +T+LPN+FQFLSI VL+CF  VGF +M  SI F+ +SKILYC GGFL  T  F
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF

Query:  IATAIPYSPYFQFIIFLLYLIFCFV-SMLITTTHNPSSSST
        IATAIPY  +F  I+ +LY IFC +  MLI+ THNPSS S+
Subjt:  IATAIPYSPYFQFIIFLLYLIFCFV-SMLITTTHNPSSSST

A0A0A0LEV1 Uncharacterized protein4.9e-1037.01Show/hide
Query:  LEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFI
        +E  A+MVEE K  I+    +    IA +SVQ + +LP++F+F+SI  LLC        M    +F+  +K+LY +G F  +T++ IA AIP   YF  +
Subjt:  LEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFI

Query:  IFLLYLIFCF-VSMLITTTHNPSSSST
        + LL+LI C  + +L++ T +P +S+T
Subjt:  IFLLYLIFCF-VSMLITTTHNPSSSST

A0A0A0LQB6 Uncharacterized protein1.3e-5577.5Show/hide
Query:  CWVGNWIRKACSLWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIET--ELPNTFQFLSIVVLLCFGFVGFGKMTKSIN
        CWVG+ IRKAC LWESLK E         GGRKL   AEMVEEWKEMIVALCVSSAIGIATVSVQIET  +LP TFQFLSIVVLLCFGFVGF KMTK I 
Subjt:  CWVGNWIRKACSLWESLKEE--------GGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIET--ELPNTFQFLSIVVLLCFGFVGFGKMTKSIN

Query:  FQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSS
        F+ VSKILYCVGGFLGVTAFFIATAIP++PYFQ IIF+LYL+FCF+ MLITT HN   SS
Subjt:  FQRVSKILYCVGGFLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSS

A0A0A0LQP5 Uncharacterized protein7.8e-2450.32Show/hide
Query:  VGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVG
        VG W R+           G  R LE  AE VEE KE I+ LCVSSAIGI T SVQI+T+LPN+FQ LS+ +LLCF  V F +M +S+ F+ +S+ILYCVG
Subjt:  VGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVG

Query:  GFLGVTAFFIATAIPY-SPYFQFIIFLLYLIFCFVSML----ITTTHN-PSSSST
         F+  T  FIATAI Y   +F  I+ +LY IFC + ++    I+ THN PSS S+
Subjt:  GFLGVTAFFIATAIPY-SPYFQFIIFLLYLIFCFVSML----ITTTHN-PSSSST

A0A0A0LSX4 Uncharacterized protein4.1e-2562.16Show/hide
Query:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF
        ++W      G  R  E AAEMVEEWK+MI+  CVSSAIGIATVSV I+TELPN+FQ LSI VLLCF  V F +M  SI F+ +SKILYCVGG L  ++ F
Subjt:  SLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGGFLGVTAFF

Query:  IATAIPYSPYF
        IATAIPY+  F
Subjt:  IATAIPYSPYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTGGGTTGGAAATTGGATTAGGAAGGCATGTAGTTTATGGGAATCATTAAAGGAAGAAGGCGGTGGCCGGAAACTGGAGGCGGCGGCGGAGATGGTG
GAGGAATGGAAGGAAATGATAGTAGCATTGTGTGTGTCATCGGCAATAGGGATAGCAACAGTGTCTGTTCAAATAGAAACAGAACTCCCAAATACATTTCAGTTT
CTATCGATTGTTGTGTTGTTGTGTTTTGGATTTGTGGGTTTTGGAAAAATGACCAAATCCATTAATTTCCAAAGAGTTTCAAAGATTTTATACTGTGTGGGAGGA
TTTTTGGGGGTGACAGCCTTTTTCATAGCCACTGCCATTCCATATTCCCCATATTTTCAGTTCATCATTTTCCTCCTTTACTTGATCTTTTGCTTCGTTTCCATG
CTAATCACCACCACCCACAACCCTTCTTCTTCCTCCACTCCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTGGGTTGGAAATTGGATTAGGAAGGCATGTAGTTTATGGGAATCATTAAAGGAAGAAGGCGGTGGCCGGAAACTGGAGGCGGCGGCGGAGATGGTG
GAGGAATGGAAGGAAATGATAGTAGCATTGTGTGTGTCATCGGCAATAGGGATAGCAACAGTGTCTGTTCAAATAGAAACAGAACTCCCAAATACATTTCAGTTT
CTATCGATTGTTGTGTTGTTGTGTTTTGGATTTGTGGGTTTTGGAAAAATGACCAAATCCATTAATTTCCAAAGAGTTTCAAAGATTTTATACTGTGTGGGAGGA
TTTTTGGGGGTGACAGCCTTTTTCATAGCCACTGCCATTCCATATTCCCCATATTTTCAGTTCATCATTTTCCTCCTTTACTTGATCTTTTGCTTCGTTTCCATG
CTAATCACCACCACCCACAACCCTTCTTCTTCCTCCACTCCCCTTTGA
Protein sequenceShow/hide protein sequence
MGCWVGNWIRKACSLWESLKEEGGGRKLEAAAEMVEEWKEMIVALCVSSAIGIATVSVQIETELPNTFQFLSIVVLLCFGFVGFGKMTKSINFQRVSKILYCVGG
FLGVTAFFIATAIPYSPYFQFIIFLLYLIFCFVSMLITTTHNPSSSSTPL