; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC05G080460 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC05G080460
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description60S acidic ribosomal protein P1-like
Genome locationCmU531Chr05:262553..263907
RNA-Seq ExpressionCmUC05G080460
SyntenyCmUC05G080460
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]8.1e-4281.6Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA LVKAA V  VESYWY LFAKLAEKR+IGDLILNVGAGGGA+VAAA PAGGAAGG AAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]2.5e-4384Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLILNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

XP_022144008.1 60S acidic ribosomal protein P1-like [Momordica charantia]1.3e-4282.4Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS  E+ACSYAA+ILYDD I ITAEKIAALVKAANV GV+SYWYSLFAKLAEKRNIGDLI+NVGAGGGA+VAAAVPAGGAAGGAAAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]2.0e-4081.6Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MSVGE+ACSYAALILYDDNIP+TAEK+A LVKAA VD  ESYW+SLFAKLAEKRNIGDLI+NVGAGGGA+VAAAVPAGG AGGAAAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]4.8e-4281.6Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA +VKAANV  VESYW+ LFAKLAEKRNIGDLILNVGAGGGA+VAAAVPA G AGGAAAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein3.9e-4281.6Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA LVKAA V  VESYWY LFAKLAEKR+IGDLILNVGAGGGA+VAAA PAGGAAGG AAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like1.2e-4384Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLILNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like1.2e-4384Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS GE+ACSYAALILYDDNIPITAEKIA LVKAANV  VESYWYSLFAKLAEKRNIGDLILNVGAGGGA+VAAAVPAGGAA G AAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

A0A6J1CS45 60S acidic ribosomal protein P1-like6.1e-4382.4Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS  E+ACSYAA+ILYDD I ITAEKIAALVKAANV GV+SYWYSLFAKLAEKRNIGDLI+NVGAGGGA+VAAAVPAGGAAGGAAAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like9.7e-4181.6Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MSVGE+ACSYAALILYDDNIP+TAEK+A LVKAA VD  ESYW+SLFAKLAEKRNIGDLI+NVGAGGGA+VAAAVPAGG AGGAAAAAAPPPEEKK    
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EEPKEESDDDMGFSLFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.1e-2558.87Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH
        +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+NVGAGGG   A    A  AA G AAAAAP  EEKK     
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH

Query:  FIPRNDMEEPKEESDDDMGFSLFD
               +EP EESD D+GF LFD
Subjt:  FIPRNDMEEPKEESDDDMGFSLFD

P50344 60S acidic ribosomal protein P17.4e-2254.4Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS
        MS  E+A SYAALIL D+ + ITA+K+ AL+ AA V  +E  W SLFAK  E +++ DL+LNVG+GGGA+ AA    G AAGGAAA    P EEK     
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNS

Query:  HFIPRNDMEEPKEESDDDMGFSLFD
                EE KEESDDDMGF LFD
Subjt:  HFIPRNDMEEPKEESDDDMGFSLFD

P52855 60S acidic ribosomal protein P12.2e-2967.46Show/hide
Query:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGAS-VAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        M+ GE+AC YAALIL DD I ITAEKIA +VKAAN+  VESYW +LFAKL EKRN+ DLIL+VG+GGGA+ VAAA P    AGGAAAAAAP  EEKK   
Subjt:  MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGAS-VAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 EE KEESDDDMGFSLFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-11.4e-2561.9Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA PA G  GG  AAAAP  EEKK   
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 +EP EESD D+GF LFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-35.9e-2762.7Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK   
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 +EP EESD D+GF LFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.0e-2661.9Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA PA G  GG  AAAAP  EEKK   
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 +EP EESD D+GF LFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD

AT4G00810.1 60S acidic ribosomal protein family7.9e-2758.87Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH
        +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+NVGAGGG   A    A  AA G AAAAAP  EEKK     
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH

Query:  FIPRNDMEEPKEESDDDMGFSLFD
               +EP EESD D+GF LFD
Subjt:  FIPRNDMEEPKEESDDDMGFSLFD

AT4G00810.2 60S acidic ribosomal protein family7.9e-2758.87Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH
        +VGE+ACSYA +IL D+ I IT++KIA LVKAA V+ +ESYW  LFAK+AEKRN+ DLI+NVGAGGG   A    A  AA G AAAAAP  EEKK     
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSH

Query:  FIPRNDMEEPKEESDDDMGFSLFD
               +EP EESD D+GF LFD
Subjt:  FIPRNDMEEPKEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family4.2e-2862.7Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK   
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 +EP EESD D+GF LFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family4.2e-2862.7Show/hide
Query:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN
        +VGE+ACSYA +IL D+ I ITA+KIA LVKAA V  +ESYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAAP  EEKK   
Subjt:  SVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGA--GGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTN

Query:  SHFIPRNDMEEPKEESDDDMGFSLFD
                 +EP EESD D+GF LFD
Subjt:  SHFIPRNDMEEPKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAAT
GTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTCA
GTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAGG
AATGACATGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAG
mRNA sequenceShow/hide mRNA sequence
TCAAGCCCATATCAGAAGCTTCAATAAAAACCAAGTTTGAGGGACTTCTCAAACCCTAGAACGCTTCGTATTGTGCAGCCAAGAAGAGACATTTCATCTGTGAAA
AATGTCGGTCGGAGAAGTTGCTTGCTCCTACGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTGCGCTTGTAAAGGCGGCTAA
TGTGGACGGTGTGGAGTCTTACTGGTACAGTCTTTTTGCTAAGTTGGCCGAGAAGCGTAACATTGGTGATTTAATCCTCAATGTTGGGGCTGGTGGTGGTGCCTC
AGTCGCAGCTGCTGTCCCAGCTGGTGGAGCTGCTGGTGGCGCTGCTGCCGCAGCTGCTCCTCCACCTGAAGAGAAAAAGGTAACCAATAGCCATTTCATTCCGAG
GAATGACATGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAGGTCGAGATATGGTTTCGCATATTTTGTTCTAGGTTGATTAT
CTTTTAAATGTCTGATGGGGCCCTTGTTATTTTACAGAGATGTAATTTTGGACATCCTTGACAAATTTGCCAGAAGTTTTGATTTTAATATGATCTGATTTCATC
TTTTTGTTTGAGATATATTATAATTATATATATCATATGTGTCCTCTCAGTATGGTAGTTTTCTGATATGTTGGTTATTTTTCTGCGATTGCGAC
Protein sequenceShow/hide protein sequence
MSVGEVACSYAALILYDDNIPITAEKIAALVKAANVDGVESYWYSLFAKLAEKRNIGDLILNVGAGGGASVAAAVPAGGAAGGAAAAAAPPPEEKKVTNSHFIPR
NDMEEPKEESDDDMGFSLFD