; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC05G093230 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC05G093230
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationCmU531Chr05:13858532..13858903
RNA-Seq ExpressionCmUC05G093230
SyntenyCmUC05G093230
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN61798.1 hypothetical protein VITISV_044291 [Vitis vinifera]7.8e-1350Show/hide
Query:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        I+ Y   ++ LLS M + M+AK+DKYW    R NLLL V  VLDPRYKL+FV F    LYD+ +A +   +  DV+RK+YDEY+
Subjt:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

XP_022152188.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia]7.3e-1140.26Show/hide
Query:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        DN +L+ +  +++AK+DKYW  ++  N LL +A VLDPRYK++F+++  + L+   +A E  KK ED++R+++ EY+
Subjt:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

XP_022152189.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia]7.3e-1140.26Show/hide
Query:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        DN +L+ +  +++AK+DKYW  ++  N LL +A VLDPRYK++F+++  + L+   +A E  KK ED++R+++ EY+
Subjt:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

XP_038877573.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]8.6e-1250.68Show/hide
Query:  LLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY
        LL  M  +M+ KFDKYW + DRINL L VA VLDPRYK++F+   L  L+D  +A   G K E V+R +++EY
Subjt:  LLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY

XP_038890289.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]7.3e-1141.76Show/hide
Query:  LLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY--------KSTDEEEDKA
        LL  MT +++ KFDKYW + DRINL L VA +LDPRYK++F ++ L  L+D  +A   G K   V+R +++EY        K  DE++ ++
Subjt:  LLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY--------KSTDEEEDKA

TrEMBL top hitse value%identityAlignment
A0A1S4A227 zinc finger BED domain-containing protein RICESLEEPER 2-like1.0e-1042.22Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKST
        +Q  IQ Y+  ++S+LS M  +M+ KF KYW   + +N LL VA VLDPRYKL++V F+    Y      +  KK  D + ++YD YKS+
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKST

A0A6J1DE70 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X13.5e-1140.26Show/hide
Query:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        DN +L+ +  +++AK+DKYW  ++  N LL +A VLDPRYK++F+++  + L+   +A E  KK ED++R+++ EY+
Subjt:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

A0A6J1DFA9 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X23.5e-1140.26Show/hide
Query:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        DN +L+ +  +++AK+DKYW  ++  N LL +A VLDPRYK++F+++  + L+   +A E  KK ED++R+++ EY+
Subjt:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

A0A6J1DPH4 zinc finger BED domain-containing protein RICESLEEPER 2-like1.3e-1043.82Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYW--KENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY
        +Q+ I++Y++Y N LLS M  RM+ KF+KYW    +++INLLL VA V DPRYKL +V +      +E  AN    K E  +R++ D+Y
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYW--KENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY

A5BUV6 BED-type domain-containing protein3.8e-1350Show/hide
Query:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK
        I+ Y   ++ LLS M + M+AK+DKYW    R NLLL V  VLDPRYKL+FV F    LYD+ +A +   +  DV+RK+YDEY+
Subjt:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYK

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.1e-0631.03Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY
        +Q ++ +    ++ + S++ + M  +FDKYWK+    NL+L +A V+DPR+K++ V F  + +Y    A    K  +D + ++Y+EY
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY

P08770 Putative AC transposase1.3e-0530Show/hide
Query:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDEEEDKAKKEI-QK
        I  + +++  ++  M   M  KF+KYWK +   N+ L VA  LDPRYK   + F +   + +         F  VIRK+Y  Y S      K K      
Subjt:  IQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDEEEDKAKKEI-QK

Query:  LEDLMEKNNGDFFSSCLQLL
        ++D + +N  D F + L  L
Subjt:  LEDLMEKNNGDFFSSCLQLL

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 47.3e-0629.35Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDE
        +Q ++Q+   + + ++  +   +  KFDKYWK+    N++L +A  +DPR+K++ V F  + +Y    A +  K  +D I  +Y EY +  E
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDE

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 26.6e-0731.03Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY
        +Q ++ +   +++ + S++ + M  +FDKYWK+    NL+L +A V+DPR+K++ V F  + +Y    A    K  +D + ++Y EY
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 32.5e-0629.35Show/hide
Query:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDE
        +Q ++ +   +++ +  +  + M  +FDKYWK+    NL+L +A V+DPR+K++ V F  + ++    A    K  +D I ++Y EY +  E
Subjt:  MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDE

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain5.8e-0630.26Show/hide
Query:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY
        ++  ++ + + M+ K DKYW++    +L+L +A V+DPR+K++ V F  + ++ E  A +  K  +D I +++ EY
Subjt:  DNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAACAAATTCAAGATTATGCAATATATGATAATTCTTTGTTGTCTGCCATGACGAGAAGAATGGAAGCAAAATTTGACAAATATTGGAAGGAGAATGAT
AGGATAAATCTGCTCTTGTGTGTTGCTGATGTTTTAGACCCTCGTTATAAGTTGGAATTTGTGATATTTATGCTTACCACTTTATATGATGAAGGGATAGCAAAT
GAAACTGGGAAAAAATTTGAAGATGTGATTAGAAAAATGTATGATGAGTATAAAAGTACTGATGAAGAGGAGGATAAAGCAAAAAAAGAAATTCAGAAATTGGAG
GATTTGATGGAGAAGAACAATGGTGATTTTTTCTCGAGCTGCTTACAATTATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAACAAATTCAAGATTATGCAATATATGATAATTCTTTGTTGTCTGCCATGACGAGAAGAATGGAAGCAAAATTTGACAAATATTGGAAGGAGAATGAT
AGGATAAATCTGCTCTTGTGTGTTGCTGATGTTTTAGACCCTCGTTATAAGTTGGAATTTGTGATATTTATGCTTACCACTTTATATGATGAAGGGATAGCAAAT
GAAACTGGGAAAAAATTTGAAGATGTGATTAGAAAAATGTATGATGAGTATAAAAGTACTGATGAAGAGGAGGATAAAGCAAAAAAAGAAATTCAGAAATTGGAG
GATTTGATGGAGAAGAACAATGGTGATTTTTTCTCGAGCTGCTTACAATTATTATAG
Protein sequenceShow/hide protein sequence
MQQQIQDYAIYDNSLLSAMTRRMEAKFDKYWKENDRINLLLCVADVLDPRYKLEFVIFMLTTLYDEGIANETGKKFEDVIRKMYDEYKSTDEEEDKAKKEIQKLE
DLMEKNNGDFFSSCLQLL