; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC05G095930 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC05G095930
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionscarecrow-like protein 21
Genome locationCmU531Chr05:24354098..24357262
RNA-Seq ExpressionCmUC05G095930
SyntenyCmUC05G095930
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592011.1 Chitin-inducible gibberellin-responsive protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3757.47Show/hide
Query:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY
        MDSHQLF +GVNSA  SY +SY SVPSLP +LLGP  F+L NSP  SS F S FESDSF TTT+ DSQDQR SP++LS LSP CNSSFE SS N+IASSY
Subjt:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY

Query:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLM----GRIMRKLGPTHGGKIDMVGHRLFRLKHCQC
        L            GSN FVY+GC TENISY LKQLES LM      ++ K  P    +  M+G R +     +C
Subjt:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLM----GRIMRKLGPTHGGKIDMVGHRLFRLKHCQC

TYK25996.1 scarecrow-like protein 21 [Cucumis melo var. makuwa]9.7e-4465.29Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+ +   SVPSLP TLLGP KF+LS+SPALS  F SHFE DSF TTT+  S DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLDH+EDESRQ +SGSN FVYDG   ENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

XP_004151967.1 scarecrow-like protein 21 [Cucumis sativus]1.4e-4567.65Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+  S  SVPSLP TLLGP KF+LSNSPALS  F SHFE DSF TTT+ DS DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLD +EDESRQ YS SN FVYDGC TENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

XP_008454576.1 PREDICTED: scarecrow-like protein 21 [Cucumis melo]9.7e-4465.29Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+ +   SVPSLP TLLGP KF+LS+SPALS  F SHFE DSF TTT+  S DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLDH+EDESRQ +SGSN FVYDG   ENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

XP_038899119.1 scarecrow-like protein 21 [Benincasa hispida]3.9e-4558.6Show/hide
Query:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY
        MDSHQLF +GV+ A LSY +SY  VPSLP TLLGP KF+LS+SP LS  F SHFESDS  TTT+ DSQDQR SP+NLS  S  CNSSFE SS NQIAS Y
Subjt:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY

Query:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMGRIMRKLGPTHGGKIDMVGHRLFRLKHCQCREANNMRQFTWGNDRN
        LDH +DESRQFYSGSN F Y+GC  ENISY LKQLESVLMG    ++       ++M G            +    R ++W  DR+
Subjt:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMGRIMRKLGPTHGGKIDMVGHRLFRLKHCQCREANNMRQFTWGNDRN

TrEMBL top hitse value%identityAlignment
A0A0A0LD17 GRAS domain-containing protein6.5e-4667.65Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+  S  SVPSLP TLLGP KF+LSNSPALS  F SHFE DSF TTT+ DS DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLD +EDESRQ YS SN FVYDGC TENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

A0A1S3BYH5 scarecrow-like protein 214.7e-4465.29Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+ +   SVPSLP TLLGP KF+LS+SPALS  F SHFE DSF TTT+  S DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLDH+EDESRQ +SGSN FVYDG   ENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

A0A5A7V8I4 Scarecrow-like protein 214.7e-4465.29Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+ +   SVPSLP TLLGP KF+LS+SPALS  F SHFE DSF TTT+  S DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLDH+EDESRQ +SGSN FVYDG   ENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

A0A5D3DQQ1 Scarecrow-like protein 214.7e-4465.29Show/hide
Query:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS
        MDSHQLF +GVNS A LS+ +   SVPSLP TLLGP KF+LS+SPALS  F SHFE DSF TTT+  S DQR SP+NLS LSP CNSSFE SS NQIASS
Subjt:  MDSHQLFRYGVNS-ANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASS

Query:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF
        YLDH+EDESRQ +SGSN FVYDG   ENISY LKQLESVLMG     ++ K   + G  G+  M+G R +
Subjt:  YLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMG----RIMRKLGPTHG--GKIDMVGHRLF

A0A6J1IFT1 scarecrow-like protein 211.5e-3757.47Show/hide
Query:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY
        MDSHQLF +GVNSA  SY +SY SVPSLP +LLG   F+  NSP  SS FLS FESDSF TTT+ DSQDQR SP++LS LSP CNSSFE SS N+IASSY
Subjt:  MDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSF-TTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIASSY

Query:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLM----GRIMRKLGPTHGGKIDMVGHRLFRLKHCQC
        L            GSN FVY+GC TENISY LKQLES LM      ++ K  P    +  M+G R +     QC
Subjt:  LDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLM----GRIMRKLGPTHGGKIDMVGHRLFRLKHCQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAATGGCCGACCAAGCTCATTTGTACGATAGTTTTGTGCCACATGGTTGGGCTGCAAAAGATGGAGACAGCCCCCCGCCAGCACCTAAGTTTCCCTCA
AAAAATAATAATAAACATGAGAGTGGGAGTGGGAATGGGAGTTTGTTGCCCACCTTTCAAAGAGGCGCATGGATTGTAAACTCTCAAGAAATCGCAACCTTCAAG
AAAAACCCAGAATTTTCAAACGCACTTCCCCACTGTGTGGTTAGCGAAGTCTTTCGTTGTCAAGTTCTGTCCAACCTCCGTCATTCTCTGCGGTACAACAATGAC
CTCCCTGCCATTACGGTGTATAGCATGGATTCTCATCAACTGTTTAGATATGGGGTCAATAGTGCTAATCTTTCTTATATAAATTCTTATTTCTCTGTTCCATCT
TTACCTATTACTTTGCTTGGACCCTTCAAATTCAGCTTAAGTAATTCTCCAGCGTTATCTTCGCCATTTTTGTCGCATTTTGAATCAGATTCATTTACGACAACT
TTGGGTGATAGTCAGGATCAAAGATACTCCCCTAATAATCTCTCTAGACTTAGCCCTTACTGTAATTCATCATTTGAAATGAGTAGCATTAATCAAATAGCCTCG
TCGTATTTGGATCATTATGAGGATGAGAGTCGACAATTCTATTCAGGGTCGAATACGTTTGTTTACGACGGATGCTTAACAGAGAACATAAGCTACGGTTTGAAA
CAATTGGAGAGTGTTCTAATGGGGCGGATAATGAGGAAGTTAGGTCCTACTCATGGAGGCAAGATCGACATGGTGGGTCATAGGTTGTTCCGTCTCAAACATTGC
CAGTGTCGAGAAGCCAACAATATGAGGCAATTCACTTGGGGAAACGATAGAAATCGATGGATGGATCAATATTGCAGTAGGGAGGATTGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAATGGCCGACCAAGCTCATTTGTACGATAGTTTTGTGCCACATGGTTGGGCTGCAAAAGATGGAGACAGCCCCCCGCCAGCACCTAAGTTTCCCTCA
AAAAATAATAATAAACATGAGAGTGGGAGTGGGAATGGGAGTTTGTTGCCCACCTTTCAAAGAGGCGCATGGATTGTAAACTCTCAAGAAATCGCAACCTTCAAG
AAAAACCCAGAATTTTCAAACGCACTTCCCCACTGTGTGGTTAGCGAAGTCTTTCGTTGTCAAGTTCTGTCCAACCTCCGTCATTCTCTGCGGTACAACAATGAC
CTCCCTGCCATTACGGTGTATAGCATGGATTCTCATCAACTGTTTAGATATGGGGTCAATAGTGCTAATCTTTCTTATATAAATTCTTATTTCTCTGTTCCATCT
TTACCTATTACTTTGCTTGGACCCTTCAAATTCAGCTTAAGTAATTCTCCAGCGTTATCTTCGCCATTTTTGTCGCATTTTGAATCAGATTCATTTACGACAACT
TTGGGTGATAGTCAGGATCAAAGATACTCCCCTAATAATCTCTCTAGACTTAGCCCTTACTGTAATTCATCATTTGAAATGAGTAGCATTAATCAAATAGCCTCG
TCGTATTTGGATCATTATGAGGATGAGAGTCGACAATTCTATTCAGGGTCGAATACGTTTGTTTACGACGGATGCTTAACAGAGAACATAAGCTACGGTTTGAAA
CAATTGGAGAGTGTTCTAATGGGGCGGATAATGAGGAAGTTAGGTCCTACTCATGGAGGCAAGATCGACATGGTGGGTCATAGGTTGTTCCGTCTCAAACATTGC
CAGTGTCGAGAAGCCAACAATATGAGGCAATTCACTTGGGGAAACGATAGAAATCGATGGATGGATCAATATTGCAGTAGGGAGGATTGCCATTAA
Protein sequenceShow/hide protein sequence
MEQMADQAHLYDSFVPHGWAAKDGDSPPPAPKFPSKNNNKHESGSGNGSLLPTFQRGAWIVNSQEIATFKKNPEFSNALPHCVVSEVFRCQVLSNLRHSLRYNND
LPAITVYSMDSHQLFRYGVNSANLSYINSYFSVPSLPITLLGPFKFSLSNSPALSSPFLSHFESDSFTTTLGDSQDQRYSPNNLSRLSPYCNSSFEMSSINQIAS
SYLDHYEDESRQFYSGSNTFVYDGCLTENISYGLKQLESVLMGRIMRKLGPTHGGKIDMVGHRLFRLKHCQCREANNMRQFTWGNDRNRWMDQYCSREDCH