; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC05G106920 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC05G106920
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRING-type domain-containing protein
Genome locationCmU531Chr05:35013499..35014843
RNA-Seq ExpressionCmUC05G106920
SyntenyCmUC05G106920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3991.92Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE DWENGRERRISITQFKSL QSF NGGTE  SASRCVMAECCVCLCGFEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

XP_022957080.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]1.4e-3958.01Show/hide
Query:  MVNQQTMVNDWWLENLSQCIN--------------------------------------------------------------AEGVLLLPVLVMNTVMS
        MV++QTMV  WWL + SQCIN                                                              AEGVLLLPVLVMNTVMS
Subjt:  MVNQQTMVNDWWLENLSQCIN--------------------------------------------------------------AEGVLLLPVLVMNTVMS

Query:  MAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        MAFLKN VRSVIQMMSASGN SSSEEE DWENGRERRISITQFKSL QSF NGGTE  SASRCVMAECCVCLCGFEADEEV
Subjt:  MAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

XP_022984317.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]1.8e-3991.92Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEEFDWENGRERRISITQFKSL QSF NGGTE  SASRC+MAECCVCLCGFEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]4.0e-3991.92Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEEFDWENGRERRISITQFKSL QSF NGGTE  SASRC MAECCVCLCGFEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

XP_038892017.1 probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida]1.4e-3992.86Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGN+SSSEEE+DWENGRERRISITQFKSL QSFNG TE DS SRCVMAECCVCLCGFEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein2.8e-3888.78Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEE+DWEN RERRISITQFK+L QSFNG TE +  SRCVMAECCVCLC FEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO1.3e-3888.78Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGNSSSSEEE+DWENGRERRISITQFK+L QSFNG TE +  SRCVMAECCVCLC FEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO3.8e-3584.85Show/hide
Query:  AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNS--SSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV
        AEGVLLLPVL+MNTVMSMAFLK+ VRSVIQMMSASG++  SSSEEE+D EN RERRISITQFKSL QSFNGGTE+ SASRC+ AECCVCLCGFEADEEV
Subjt:  AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNS--SSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEV

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO6.7e-4058.01Show/hide
Query:  MVNQQTMVNDWWLENLSQCIN--------------------------------------------------------------AEGVLLLPVLVMNTVMS
        MV++QTMV  WWL + SQCIN                                                              AEGVLLLPVLVMNTVMS
Subjt:  MVNQQTMVNDWWLENLSQCIN--------------------------------------------------------------AEGVLLLPVLVMNTVMS

Query:  MAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        MAFLKN VRSVIQMMSASGN SSSEEE DWENGRERRISITQFKSL QSF NGGTE  SASRCVMAECCVCLCGFEADEEV
Subjt:  MAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO8.7e-4091.92Show/hide
Query:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV
        +AEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEEFDWENGRERRISITQFKSL QSF NGGTE  SASRC+MAECCVCLCGFEADEEV
Subjt:  NAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSF-NGGTENDSASRCVMAECCVCLCGFEADEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein2.2e-1144.09Show/hide
Query:  MNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEVIKARSFK
        MNTV+S+  LKN VRSV Q++++   SS   ++   ++   RRISITQFKSL ++     E          ECCVCLCGF+ +EEV +  S K
Subjt:  MNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEVIKARSFK

AT1G67856.1 RING/U-box superfamily protein2.8e-1446.23Show/hide
Query:  AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEFDWENG-RERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEVI
        +EGV  +P+LVMNTV+S++ +KN VRSV+ M+S+  N + + E++ D E+  R RRISIT F+SL +  N G+ N+  +     +CCVCLCGF+ +EEV 
Subjt:  AEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEFDWENG-RERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLCGFEADEEVI

Query:  KARSFK
        +  S K
Subjt:  KARSFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACCAACAAACCATGGTTAACGATTGGTGGTTAGAAAACCTCAGTCAATGTATAAATGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGAACACTGTAAT
GTCGATGGCGTTCTTGAAGAATTTTGTGAGATCTGTTATACAAATGATGAGTGCGAGTGGGAATTCTTCGAGTTCTGAGGAAGAATTCGATTGGGAAAATGGAAGAGAAA
GAAGAATCTCAATTACTCAGTTCAAATCTTTGGAGCAAAGCTTTAATGGTGGAACAGAGAATGACTCTGCTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGT
GGGTTTGAAGCTGATGAAGAAGTTATAAAAGCAAGAAGCTTTAAATGGCTTGGAGCAGTTGGGCAGTCACATTACAGGCAATTCCAAAGTGGGGCCTTTTTTTCTTCAGT
GAAAAATCTGGTTCATGATTCAACACAAGAAATGTTGTGTGCTGGCCAAATTGATGGCCAGAAGTTCAGCTATGGGGCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACCAACAAACCATGGTTAACGATTGGTGGTTAGAAAACCTCAGTCAATGTATAAATGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGAACACTGTAAT
GTCGATGGCGTTCTTGAAGAATTTTGTGAGATCTGTTATACAAATGATGAGTGCGAGTGGGAATTCTTCGAGTTCTGAGGAAGAATTCGATTGGGAAAATGGAAGAGAAA
GAAGAATCTCAATTACTCAGTTCAAATCTTTGGAGCAAAGCTTTAATGGTGGAACAGAGAATGACTCTGCTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGT
GGGTTTGAAGCTGATGAAGAAGTTATAAAAGCAAGAAGCTTTAAATGGCTTGGAGCAGTTGGGCAGTCACATTACAGGCAATTCCAAAGTGGGGCCTTTTTTTCTTCAGT
GAAAAATCTGGTTCATGATTCAACACAAGAAATGTTGTGTGCTGGCCAAATTGATGGCCAGAAGTTCAGCTATGGGGCACAATGA
Protein sequenceShow/hide protein sequence
MVNQQTMVNDWWLENLSQCINAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEFDWENGRERRISITQFKSLEQSFNGGTENDSASRCVMAECCVCLC
GFEADEEVIKARSFKWLGAVGQSHYRQFQSGAFFSSVKNLVHDSTQEMLCAGQIDGQKFSYGAQ