; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC06G112480 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC06G112480
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein SINE3
Genome locationCmU531Chr06:4919904..4921234
RNA-Seq ExpressionCmUC06G112480
SyntenyCmUC06G112480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575120.1 hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sororia]2.6e-8076.68Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDR-----SFLEGVNPAFSASCETSLFPDLSPSSV
        MEKRMKD QTPQRDQ ANRRSRKP KIAKCLTATFSSL DDKIQ  SK+DFSPIS  SD+NQIPDIDR     S+L  VNPA SA C +SL PDLSPSSV
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDR-----SFLEGVNPAFSASCETSLFPDLSPSSV

Query:  VTFDNEQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFI
        VTFDN QLDKVPVNFSGSND+DE   GSV  EIAVNSL RALTQVLQSTDV HQ+KKLI+AS+ IIV+DFLAIPQ+RD I QLIS KN VL + +FLW I
Subjt:  VTFDNEQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFI

Query:  VLAIAFFFGSSGVNSSFIGPLPT
        VLA+AFFF S  V SSFIGPLPT
Subjt:  VLAIAFFFGSSGVNSSFIGPLPT

KAG6594019.1 hypothetical protein SDJN03_13495, partial [Cucurbita argyrosperma subsp. sororia]7.7e-8076.61Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKR K+YQTP RDQ ANRRS+KP KI K LTATFSS  DDKIQPISKEDFSPIS  S+I+QIPDID SFL+ VNPA S SCE+SLFP+LSPSSVVTFDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        +QLDKVPVNF GSN++DEAS GSVE EIAVN LRRAL+QVLQSTDV HQSKKLI+AS+ IIV++FLAIPQERD I +LIS K+HVL L +FLW IVL  A
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV + FIGPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

XP_008458341.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo]5.5e-8680.73Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKRMKD+QTPQR+QT NRRSRKPQKIAKCLTA+FSSL +DKI  ISKE+ SPIS  SD+NQI DID SFL+GVNP FSA C+TSLFPDLSPSSVV+FDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        E LDKV V+FSGSNDM+EAS GS+E EIAVNSLRRALTQVL STDV HQSKKLI+ASM IIV+DFLAIPQERD+IAQLISVKN+VL +CVFLW +VLAIA
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV SSF GPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

XP_022959315.1 uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata]2.6e-8077.06Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        ME+RMKD QTPQRDQ ANRRSRKP KIAKCLTATFSSL DDKIQ  SK+DFS IS  SD+NQIPDIDRSFL  VNPA SA C +SL PDLSPSSVVTFDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
         QLDKVPVNFSGSND+DE   GSV  EIAV+SL RALTQVLQSTDV HQ+KKLI+AS+ IIV+DFLAIPQ+RD I Q+IS KN VL + +FLW IVLA+A
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FFF S  V SSFIGPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]5.7e-9990.83Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEK+MKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSL DDKIQPISKEDFSPIS  +DINQIPDID +FL+GVNPAFSASCETSLF DLSPSSVV+FDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        EQLDKVPVNFSGSNDMDEAS GSVEV+IAVNSLRRALTQVLQSTDV HQSKKLI+ASMSIIV+DFLAIPQERDQIAQLISVKNHVL LCVFLW IVLAIA
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV SSFIGPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

TrEMBL top hitse value%identityAlignment
A0A0A0KI59 Uncharacterized protein8.3e-8076.61Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKRMKD+QTPQR+QT NR SRKPQKIAKC +AT  SL +DKI  ISKE+ SPISA SD+NQI DI  SFL+GVNP FSA C+TSLFPDLS SSVV+FDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        E LDKV  +FSGSND++EAS GSVE EIAVN +RRALTQVLQSTDV HQSKKLI+ASM II +DFLAIPQ+RDQIAQLIS K HVL +CVFLW IVLA A
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV SSF GPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

A0A1S4E1Y8 uncharacterized protein LOC1034977812.7e-8680.73Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKRMKD+QTPQR+QT NRRSRKPQKIAKCLTA+FSSL +DKI  ISKE+ SPIS  SD+NQI DID SFL+GVNP FSA C+TSLFPDLSPSSVV+FDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        E LDKV V+FSGSNDM+EAS GS+E EIAVNSLRRALTQVL STDV HQSKKLI+ASM IIV+DFLAIPQERD+IAQLISVKN+VL +CVFLW +VLAIA
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV SSF GPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

A0A5D3BTA3 Uncharacterized protein2.7e-8680.73Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKRMKD+QTPQR+QT NRRSRKPQKIAKCLTA+FSSL +DKI  ISKE+ SPIS  SD+NQI DID SFL+GVNP FSA C+TSLFPDLSPSSVV+FDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        E LDKV V+FSGSNDM+EAS GS+E EIAVNSLRRALTQVL STDV HQSKKLI+ASM IIV+DFLAIPQERD+IAQLISVKN+VL +CVFLW +VLAIA
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV SSF GPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

A0A6J1EQ83 uncharacterized protein LOC1114368221.1e-7976.15Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        MEKR K+YQTP RDQ ANRRS+KP KI K LTATFSS  DDKIQPI KEDFSPIS  S+I+QIPDID SFL+ VNPA S SCE+SLFP+LSPSSVVTFDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
        +QLDKVPVNF GSN++DEAS GSVE EIAVN LRRAL+QVLQSTDV HQSKKLI+AS+ IIV++FLAIPQERD I +LIS K+HVL L +FLW IVL +A
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FF G SGV + FIGPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X11.3e-8077.06Show/hide
Query:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN
        ME+RMKD QTPQRDQ ANRRSRKP KIAKCLTATFSSL DDKIQ  SK+DFS IS  SD+NQIPDIDRSFL  VNPA SA C +SL PDLSPSSVVTFDN
Subjt:  MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDN

Query:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA
         QLDKVPVNFSGSND+DE   GSV  EIAV+SL RALTQVLQSTDV HQ+KKLI+AS+ IIV+DFLAIPQ+RD I Q+IS KN VL + +FLW IVLA+A
Subjt:  EQLDKVPVNFSGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIA

Query:  FFFGSSGVNSSFIGPLPT
        FFF S  V SSFIGPLPT
Subjt:  FFFGSSGVNSSFIGPLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGATGAAAGACTACCAAACTCCGCAGAGAGATCAAACCGCAAATCGTAGATCAAGGAAGCCTCAGAAGATCGCCAAATGCTTGACTGCCACATTTTCATC
ACTTCCCGACGATAAAATCCAGCCAATTTCTAAGGAAGACTTCTCTCCGATTTCTGCTGCCTCAGACATCAATCAAATTCCAGATATCGATAGAAGTTTCTTAGAAGGTG
TTAATCCGGCATTTTCTGCTTCATGCGAGACCTCGCTTTTCCCCGATCTTTCTCCATCTTCAGTTGTCACTTTTGACAATGAACAGCTTGATAAGGTTCCAGTTAATTTT
TCTGGATCTAATGATATGGATGAAGCAAGCGTGGGTTCAGTAGAGGTAGAGATTGCTGTGAATTCTCTACGGCGTGCTCTAACTCAAGTCCTGCAATCGACGGATGTTGG
TCATCAGTCTAAGAAGCTTATAAATGCATCCATGAGTATCATTGTGGAAGACTTCCTTGCTATACCTCAAGAGCGAGATCAGATTGCTCAACTTATTTCTGTCAAAAATC
ATGTTCTCTTTCTGTGTGTATTCCTGTGGTTCATCGTCTTGGCTATAGCTTTCTTTTTTGGTTCGTCGGGAGTCAATAGCTCTTTCATTGGGCCATTGCCAACTTAA
mRNA sequenceShow/hide mRNA sequence
CTTAATTTCAATACTTCCCAAAATTTTCCCGCGATATCAATATGGAGAAAAGGATGAAAGACTACCAAACTCCGCAGAGAGATCAAACCGCAAATCGTAGATCAAGGAAG
CCTCAGAAGATCGCCAAATGCTTGACTGCCACATTTTCATCACTTCCCGACGATAAAATCCAGCCAATTTCTAAGGAAGACTTCTCTCCGATTTCTGCTGCCTCAGACAT
CAATCAAATTCCAGATATCGATAGAAGTTTCTTAGAAGGTGTTAATCCGGCATTTTCTGCTTCATGCGAGACCTCGCTTTTCCCCGATCTTTCTCCATCTTCAGTTGTCA
CTTTTGACAATGAACAGCTTGATAAGGTTCCAGTTAATTTTTCTGGATCTAATGATATGGATGAAGCAAGCGTGGGTTCAGTAGAGGTAGAGATTGCTGTGAATTCTCTA
CGGCGTGCTCTAACTCAAGTCCTGCAATCGACGGATGTTGGTCATCAGTCTAAGAAGCTTATAAATGCATCCATGAGTATCATTGTGGAAGACTTCCTTGCTATACCTCA
AGAGCGAGATCAGATTGCTCAACTTATTTCTGTCAAAAATCATGTTCTCTTTCTGTGTGTATTCCTGTGGTTCATCGTCTTGGCTATAGCTTTCTTTTTTGGTTCGTCGG
GAGTCAATAGCTCTTTCATTGGGCCATTGCCAACTTAAACTTGGCAAGAAATCCATTGTTTAAGCATCAGAGGTTAGAACTTATTTGATTTTGTTGTAACTTCTTACCTA
TGAATTGGACTTTACCTGTTTCATCTTCCTACATAAGAAACCTGTCGAACTTTGAAAGTTTGTAGTAAAAAATTAACCGTGTATAACCTAATGGTTAGCTTATTATGATT
AACGCTATTTGACATTTTCATAAACTTGTGAGTGATCTAATGACTTCGATCTTTTTGTAATCCTTTACGCAGTGCATTTAACTGCTTATTAG
Protein sequenceShow/hide protein sequence
MEKRMKDYQTPQRDQTANRRSRKPQKIAKCLTATFSSLPDDKIQPISKEDFSPISAASDINQIPDIDRSFLEGVNPAFSASCETSLFPDLSPSSVVTFDNEQLDKVPVNF
SGSNDMDEASVGSVEVEIAVNSLRRALTQVLQSTDVGHQSKKLINASMSIIVEDFLAIPQERDQIAQLISVKNHVLFLCVFLWFIVLAIAFFFGSSGVNSSFIGPLPT