; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC06G112740 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC06G112740
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionzinc finger protein 6-like
Genome locationCmU531Chr06:5194711..5195722
RNA-Seq ExpressionCmUC06G112740
SyntenyCmUC06G112740
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47401.1 hypothetical protein Csa_022997 [Cucumis sativus]3.6e-4578.29Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T S+DGA NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP QPTK+S NF  STP   P ST  I SA RA PPKYGI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARIFC
        +VG  EVN ESNG+DLHLSLAPSS RIFC
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARIFC

XP_004150094.1 zinc finger protein 6 [Cucumis sativus]3.6e-4578.29Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T S+DGA NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP QPTK+S NF  STP   P ST  I SA RA PPKYGI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARIFC
        +VG  EVN ESNG+DLHLSLAPSS RIFC
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARIFC

XP_008458383.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]2.1e-4074.02Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T +++GA  LGAPC NH+KRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP  PTK+S NFFTST    PPST  I SA RA PPK GI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARI
        +VG  +V+ ESNG+DLHLSLAPSSARI
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARI

XP_023006285.1 zinc finger protein 6-like [Cucurbita maxima]3.4e-3566.15Show/hide
Query:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA
        G  +TAS++  +LGAPC+NH KRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP        NFFT TP   PPS A I     + PP Y + V+A
Subjt:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA

Query:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF
        PP VG  E+NGE+NG+DLHLSLAPSS RIF
Subjt:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]2.6e-3565.38Show/hide
Query:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA
        G  +TAS++  +LGAPC+NH KRF+CQFCGREFANSQALGGHQNAHKRERQL KQLLP        NFFT TP   PPS     +A R+ PP Y + V+A
Subjt:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA

Query:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF
        PP VG  E+NGE+NG+DLHLSLAPSS RIF
Subjt:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein1.8e-4578.29Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T S+DGA NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP QPTK+S NF  STP   P ST  I SA RA PPKYGI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARIFC
        +VG  EVN ESNG+DLHLSLAPSS RIFC
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARIFC

A0A1S3C7Q6 zinc finger protein 6-like1.0e-4074.02Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T +++GA  LGAPC NH+KRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP  PTK+S NFFTST    PPST  I SA RA PPK GI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARI
        +VG  +V+ ESNG+DLHLSLAPSSARI
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARI

A0A5D3BTX6 Zinc finger protein 6-like1.0e-4074.02Show/hide
Query:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP
        T +++GA  LGAPC NH+KRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP  PTK+S NFFTST    PPST  I SA RA PPK GI VQA P 
Subjt:  TASSDGA-NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA-PP

Query:  LVGNSEVNGESNGIDLHLSLAPSSARI
        +VG  +V+ ESNG+DLHLSLAPSSARI
Subjt:  LVGNSEVNGESNGIDLHLSLAPSSARI

A0A6J1H7Y0 zinc finger protein 6-like4.8e-3564.62Show/hide
Query:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA
        G  + AS++  +LGAPC+NH KRF+CQFCGREFANSQALGGHQNAHKRERQL KQLLP        NFFT TP   PPS     +A R+ PP Y + V+A
Subjt:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA

Query:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF
        PP VG  E+NGE+NG+DLHLSLAPSS RIF
Subjt:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF

A0A6J1KZQ7 zinc finger protein 6-like1.6e-3566.15Show/hide
Query:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA
        G  +TAS++  +LGAPC+NH KRFECQFCGREFANSQALGGHQNAHKRERQL KQLLP        NFFT TP   PPS A I     + PP Y + V+A
Subjt:  GCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQA

Query:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF
        PP VG  E+NGE+NG+DLHLSLAPSS RIF
Subjt:  PPLVGNSEVNGESNGIDLHLSLAPSSARIF

SwissProt top hitse value%identityAlignment
P93751 Zinc finger protein 81.7e-0835.71Show/hide
Query:  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQ------LLPFQPTKNSH-------NFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPPLV
        +N+N+RFEC +C R F  SQALGGHQNAHKRERQ  K+      L   QP    H       +     PS +  + +         P  Y  +  APP  
Subjt:  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQ------LLPFQPTKNSH-------NFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPPLV

Query:  GNSEVNGESNGI
            +NG   G+
Subjt:  GNSEVNGESNGI

Q39264 Zinc finger protein 54.3e-0950.77Show/hide
Query:  TASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFF
        TA S  ++         KR ECQ+CG+EFANSQALGGHQNAHK+ER L K+ L  Q  + S  ++
Subjt:  TASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFF

Q39265 Zinc finger protein 67.9e-1153.12Show/hide
Query:  GAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVK--QLLPFQPTKNSHNFFTSTPSL
        G+   + ++++ECQ+C REFANSQALGGHQNAHK+ERQL+K  Q+L  +     HNF   T  L
Subjt:  GAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVK--QLLPFQPTKNSHNFFTSTPSL

Q84WI0 Zinc finger protein GIS2.0e-0954.72Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLP---FQPTKNSHNF
        +HN+RFEC +C R F  SQALGGHQNAHKRERQL K+ +    + P  N +++
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLP---FQPTKNSHNF

Q9C9H1 Zinc finger protein GIS34.3e-0946.91Show/hide
Query:  KRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPP
        +++ECQ+C REF NSQALGGHQNAHK+ERQ +K+    Q T+N+   F++  S S      I SA    PP + +S  A P
Subjt:  KRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPP

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 53.1e-1050.77Show/hide
Query:  TASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFF
        TA S  ++         KR ECQ+CG+EFANSQALGGHQNAHK+ER L K+ L  Q  + S  ++
Subjt:  TASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFF

AT1G67030.1 zinc finger protein 65.6e-1253.12Show/hide
Query:  GAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVK--QLLPFQPTKNSHNFFTSTPSL
        G+   + ++++ECQ+C REFANSQALGGHQNAHK+ERQL+K  Q+L  +     HNF   T  L
Subjt:  GAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVK--QLLPFQPTKNSHNFFTSTPSL

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein3.1e-1046.91Show/hide
Query:  KRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPP
        +++ECQ+C REF NSQALGGHQNAHK+ERQ +K+    Q T+N+   F++  S S      I SA    PP + +S  A P
Subjt:  KRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPP

AT2G41940.1 zinc finger protein 81.2e-0935.71Show/hide
Query:  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQ------LLPFQPTKNSH-------NFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPPLV
        +N+N+RFEC +C R F  SQALGGHQNAHKRERQ  K+      L   QP    H       +     PS +  + +         P  Y  +  APP  
Subjt:  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQ------LLPFQPTKNSH-------NFFTSTPSLSPPSTAVICSAERALPPKYGISVQAPPLV

Query:  GNSEVNGESNGI
            +NG   G+
Subjt:  GNSEVNGESNGI

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-1054.72Show/hide
Query:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLP---FQPTKNSHNF
        +HN+RFEC +C R F  SQALGGHQNAHKRERQL K+ +    + P  N +++
Subjt:  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLP---FQPTKNSHNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTGGAGTTTCCAGAGTTGGTTGTTGGAAGTCGCCAGTATTGGCCGTCAGAGGTGGTCGCCAAAGTTGATTTTCGGAGGTGGTTGTCAGAGTTGGCCGTT
GGGAGTGGTTGTCGAATGACGGCTAGTAGTGATGGAGCCAACTTGGGTGCGCCATGTTCGAACCACAACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTC
GCCAATTCTCAAGCCCTCGGTGGCCACCAGAACGCCCACAAGCGCGAGCGTCAGCTCGTCAAACAACTACTTCCTTTCCAACCCACTAAAAACTCTCATAATTTT
TTTACTTCCACGCCATCTTTGTCGCCGCCCTCCACTGCCGTAATCTGCTCCGCTGAAAGGGCTCTGCCGCCGAAATATGGGATCTCGGTCCAAGCACCGCCGTTG
GTTGGCAACAGTGAAGTGAATGGAGAAAGTAATGGCATTGATCTCCACCTCAGTCTCGCACCTTCCTCGGCCAGGATCTTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTGGAGTTTCCAGAGTTGGTTGTTGGAAGTCGCCAGTATTGGCCGTCAGAGGTGGTCGCCAAAGTTGATTTTCGGAGGTGGTTGTCAGAGTTGGCCGTT
GGGAGTGGTTGTCGAATGACGGCTAGTAGTGATGGAGCCAACTTGGGTGCGCCATGTTCGAACCACAACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTC
GCCAATTCTCAAGCCCTCGGTGGCCACCAGAACGCCCACAAGCGCGAGCGTCAGCTCGTCAAACAACTACTTCCTTTCCAACCCACTAAAAACTCTCATAATTTT
TTTACTTCCACGCCATCTTTGTCGCCGCCCTCCACTGCCGTAATCTGCTCCGCTGAAAGGGCTCTGCCGCCGAAATATGGGATCTCGGTCCAAGCACCGCCGTTG
GTTGGCAACAGTGAAGTGAATGGAGAAAGTAATGGCATTGATCTCCACCTCAGTCTCGCACCTTCCTCGGCCAGGATCTTCTGTTAA
Protein sequenceShow/hide protein sequence
MLLEFPELVVGSRQYWPSEVVAKVDFRRWLSELAVGSGCRMTASSDGANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLVKQLLPFQPTKNSHNF
FTSTPSLSPPSTAVICSAERALPPKYGISVQAPPLVGNSEVNGESNGIDLHLSLAPSSARIFC