; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC06G113170 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC06G113170
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionDynein beta chain, ciliary protein
Genome locationCmU531Chr06:5663397..5668251
RNA-Seq ExpressionCmUC06G113170
SyntenyCmUC06G113170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKA+DHDGPMG+ QIAERYNV VAQI+TI QFLSLPPEDS+++KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_008458465.1 PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]1.4e-8387.37Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES +LDSG V+ SDSGN LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
        YGRPMPKLR+T+IKSSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMG  QIAERYNVSVAQIQTI QFLSLPPEDS+R+K  D K
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]9.4e-8588.83Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES ALDSG V  SDSGN+LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD
        YGRPMPKLR+T+I SSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMGL QIAERYNVSVAQIQTI QFLSLPPEDS+R+K KD
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]8.0e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHI+LLH+GKA+DHDGPMG+ QIAERYNV VAQI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]1.5e-8586.24Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES +LDSG V GS+SGNVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMPKLRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKADDHDGPMG+ QIAERYNV V+QI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein4.6e-8588.83Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES ALDSG V  SDSGN+LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD
        YGRPMPKLR+T+I SSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMGL QIAERYNVSVAQIQTI QFLSLPPEDS+R+K KD
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X16.6e-8487.37Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES +LDSG V+ SDSGN LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
        YGRPMPKLR+T+IKSSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMG  QIAERYNVSVAQIQTI QFLSLPPEDS+R+K  D K
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

A0A6J1C9H1 uncharacterized protein LOC1110095504.6e-7777.2Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKA-----LESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEAS
        MGQAFRRAAGRIKPASS+DSTA+SLKMES+VDR+PPPR  +KA      ES ALDSG + GS+S NV EERDPQFDAML QMVGRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKA-----LESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEAS

Query:  VVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDP
        VVERY RPMPKLRNTD+KSS+YEDRPAPPGT+NVAQMRH+I LH+GKA+DH+G M ++QIA+RYNVSV QI TI QFLSLPPED++R K KDP
Subjt:  VVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDP

A0A6J1H4J6 uncharacterized protein LOC1114599753.9e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHI+LLH+GKA+DHDGPMG+ QIAERYNV VAQI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

A0A6J1L288 uncharacterized protein LOC1114991807.1e-8686.24Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES +LDSG V GS+SGNVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMPKLRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKADDHDGPMG+ QIAERYNV V+QI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein7.5e-4852.08Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSG------NVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEA
        MGQ  RRA G+IK       +  S      +DR+  P     A++S    + V   SD G      NVLEERDP++D ML+QMVGRI++KPGGK EMGEA
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSG------NVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEA

Query:  SVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKK
        SVVE   RP+PKLRNT  +S++YE+ P P GT+NVAQ+RHI+LL QGK+ DH GPMG+ +IAE+Y + V+Q+Q I QFLSLP E + ++KK+
Subjt:  SVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCATTACGTGGAGAAATATCGGACCAGCCACGTTCGCCCTCCCAACACTATTTTATTTTTCTCATTGCGGCTCGAGTTTCGTACTCAGTAAAACCCGAGTCACG
ACTCACCCGATTCCTCCTCTCTTCTCCATTTCCCCCTGAAATTGTCGTAAAACCCTCCGTCTCTTCGTTTTATGAGATCGTTGCTCGTTTCGAACAAGGAAGGATGGGAC
AGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCAGCTTCGAGTATGGATTCCACTGCCGCTTCGTTGAAAATGGAGAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTG
GCCGAGAAGGCTCTGGAAAGCCGTGCGCTTGATTCTGGTGTTGTCTCGGGAAGTGATTCTGGAAATGTGCTTGAAGAACGAGATCCCCAATTTGACGCCATGCTTAGCCA
AATGGTGGGTCGAATTAGATCAAAGCCTGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAAAGGTACGGGAGACCAATGCCAAAGCTAAGAAACACAGATATAA
AATCGAGTAAATATGAGGATCGTCCAGCCCCACCAGGAACTATAAACGTAGCGCAGATGCGCCACATAATTCTCCTGCATCAAGGTAAGGCTGATGATCATGATGGCCCA
ATGGGACTTCGCCAAATCGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCTCTCCCTCCAGAGGATAGTATTAGAGAGAAAAAGAA
GGATCCTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCATTACGTGGAGAAATATCGGACCAGCCACGTTCGCCCTCCCAACACTATTTTATTTTTCTCATTGCGGCTCGAGTTTCGTACTCAGTAAAACCCGAGTCACG
ACTCACCCGATTCCTCCTCTCTTCTCCATTTCCCCCTGAAATTGTCGTAAAACCCTCCGTCTCTTCGTTTTATGAGATCGTTGCTCGTTTCGAACAAGGAAGGATGGGAC
AGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCAGCTTCGAGTATGGATTCCACTGCCGCTTCGTTGAAAATGGAGAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTG
GCCGAGAAGGCTCTGGAAAGCCGTGCGCTTGATTCTGGTGTTGTCTCGGGAAGTGATTCTGGAAATGTGCTTGAAGAACGAGATCCCCAATTTGACGCCATGCTTAGCCA
AATGGTGGGTCGAATTAGATCAAAGCCTGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAAAGGTACGGGAGACCAATGCCAAAGCTAAGAAACACAGATATAA
AATCGAGTAAATATGAGGATCGTCCAGCCCCACCAGGAACTATAAACGTAGCGCAGATGCGCCACATAATTCTCCTGCATCAAGGTAAGGCTGATGATCATGATGGCCCA
ATGGGACTTCGCCAAATCGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCTCTCCCTCCAGAGGATAGTATTAGAGAGAAAAAGAA
GGATCCTAAATGACAGGAATGGAGCCAAGAAAACAAAGGAAGGGGCAATTGCTCCTAAGAAGCAAAAAAATAAAGGTTTCAAAAATTTTCTAAATGTTCTAGGGGGTCTT
TAAACTTTCAATTGTGTGTGCGATAAATCATTGAATTTTTTATTTTGTGTCCGATA
Protein sequenceShow/hide protein sequence
MVPLRGEISDQPRSPSQHYFIFLIAARVSYSVKPESRLTRFLLSSPFPPEIVVKPSVSSFYEIVARFEQGRMGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRV
AEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGP
MGLRQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK