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CmUC06G113290 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC06G113290
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionprotein RALF-like 4
Genome locationCmU531Chr06:5806537..5806887
RNA-Seq ExpressionCmUC06G113290
SyntenyCmUC06G113290
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148669.1 protein RALF-like 19 [Cucumis sativus]1.5e-3770.09Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYG-APDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN
        M + KLCLFLLLIA    PL LA  DDW R+Y   PDY +  S+     ED+RRLLFQYGFAYKYP+N+YL YDALRKNNIPC  RG SYYDC+KR+KAN
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYG-APDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]1.2e-3670.43Show/hide
Query:  LCLFLLLIA-AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPY
        LCL LL+ A A T+P+AL    DW RAYG PDYA+W ++ PA    ++D+RRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYYDC KRRKANPY
Subjt:  LCLFLLLIA-AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPY

Query:  RRGCTAITGCARFTD
        RRGC AITGCARFTD
Subjt:  RRGCTAITGCARFTD

XP_008441015.1 PREDICTED: protein RALF-like 19 [Cucumis melo]3.3e-3768.97Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP
        M ++KL LFLL+IA    PL LAF DDW  AY AP+Y +  ++     ED+RRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYYDC+KRRKANP
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]8.6e-3869.75Show/hide
Query:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK
        +KLCL LLL+    AAT+P+AL    DW RA+G P+YA+W +S PA    ++D+RRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYYDC KRRK
Subjt:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]9.5e-4577.78Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTP-AAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN
        MGT+KLCLFLLL+AA + PL+ A+  DW  AYGAP+YA+W SSTP A +EDNRRLLFQYGFAYKYPRNRYLSY+ALRKNN+PCG RG SYYDC + +KAN
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTP-AAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGCTAITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KHU4 Uncharacterized protein7.1e-3870.09Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYG-APDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN
        M + KLCLFLLLIA    PL LA  DDW R+Y   PDY +  S+     ED+RRLLFQYGFAYKYP+N+YL YDALRKNNIPC  RG SYYDC+KR+KAN
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYG-APDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKAN

Query:  PYRRGCTAITGCARFTD
        PYRRGC AITGCARFTD
Subjt:  PYRRGCTAITGCARFTD

A0A1S3B2H7 protein RALF-like 191.6e-3768.97Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP
        M ++KL LFLL+IA    PL LAF DDW  AY AP+Y +  ++     ED+RRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYYDC+KRRKANP
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

A0A1S4E1Z3 protein RALF-like 44.2e-3869.75Show/hide
Query:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK
        +KLCL LLL+    AAT+P+AL    DW RA+G P+YA+W +S PA    ++D+RRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYYDC KRRK
Subjt:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

A0A5A7SVY5 Protein RALF-like 44.2e-3869.75Show/hide
Query:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK
        +KLCL LLL+    AAT+P+AL    DW RA+G P+YA+W +S PA    ++D+RRLLFQYGFAYKYP+N+YL YDALRKNN PC RRG SYYDC KRRK
Subjt:  VKLCLFLLLIA---AATVPLALAFPDDWARAYGAPDYAYWASSTPAA---MEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRK

Query:  ANPYRRGCTAITGCARFTD
        ANPYRRGC AITGCARFTD
Subjt:  ANPYRRGCTAITGCARFTD

A0A5D3DPV5 Protein RALF-like 191.6e-3768.97Show/hide
Query:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP
        M ++KL LFLL+IA    PL LAF DDW  AY AP+Y +  ++     ED+RRLLFQYGFAYKYP+N+YL YDALRKNN PC  RG SYYDC+KRRKANP
Subjt:  MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANP

Query:  YRRGCTAITGCARFTD
        YRRGC AITGCARFTD
Subjt:  YRRGCTAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 194.8e-1570Show/hide
Query:  RNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARFT
        R  Y+SY ALRKNN+PC RRG SYYDC+KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARFT

Q8L9P8 Protein RALF-like 333.8e-1252.31Show/hide
Query:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR
        E NRR+L            +Y+SY ALR+N +PC RRG SYY+CR+  +ANPY RGC+AIT C R
Subjt:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR

Q945T0 Rapid alkalinization factor1.9e-1150.79Show/hide
Query:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGC
        E NRR+L            +Y+SY AL+KN++PC RRG SYY+C+   +ANPY RGC+AIT C
Subjt:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGC

Q9FZA0 Protein RALF-like 41.6e-1572.34Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARF
        RY+ YDAL+KNN+PC RRG SYYDC+KRR+ NPYRRGC+AIT C R+
Subjt:  RYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARF

Q9LUS7 Rapid alkalinization factor 231.3e-1255.38Show/hide
Query:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR
        E NRR+L            RY+SY ALR+N IPC RRG SYY+CR+  +ANPY RGC+AIT C R
Subjt:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 41.2e-1672.34Show/hide
Query:  RYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARF
        RY+ YDAL+KNN+PC RRG SYYDC+KRR+ NPYRRGC+AIT C R+
Subjt:  RYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARF

AT2G33775.1 ralf-like 193.4e-1670Show/hide
Query:  RNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARFT
        R  Y+SY ALRKNN+PC RRG SYYDC+KR++ANPYRRGC+ IT C R T
Subjt:  RNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCARFT

AT3G05490.1 ralf-like 224.3e-1133.64Show/hide
Query:  LLLIAAATVPLALAFPD--DWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYK-YPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCT
        +L I  + V     F D  D+ RA  +  ++    S    + +   + F    + +   + +Y+SY A+R+N++PC RRG SYY+C++  +ANPY RGC+
Subjt:  LLLIAAATVPLALAFPD--DWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYK-YPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCT

Query:  AITGCAR
         IT C R
Subjt:  AITGCAR

AT3G16570.1 rapid alkalinization factor 239.2e-1455.38Show/hide
Query:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR
        E NRR+L            RY+SY ALR+N IPC RRG SYY+CR+  +ANPY RGC+AIT C R
Subjt:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR

AT4G15800.1 ralf-like 332.7e-1352.31Show/hide
Query:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR
        E NRR+L            +Y+SY ALR+N +PC RRG SYY+CR+  +ANPY RGC+AIT C R
Subjt:  EDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCGTGAAGCTCTGCCTATTTCTCCTCCTCATCGCCGCCGCCACTGTCCCTCTTGCCCTTGCCTTCCCCGACGACTGGGCCCGCGCCTACGGTGCACCCGACTA
CGCCTACTGGGCATCATCAACACCGGCGGCGATGGAAGACAACCGGCGGCTACTATTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATGATG
CACTCAGGAAGAACAATATCCCCTGCGGCCGCCGCGGCACCTCTTACTATGACTGCAGGAAGCGCCGAAAGGCCAACCCTTACCGCCGTGGCTGCACCGCCATCACCGGC
TGCGCTCGATTCACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACCGTGAAGCTCTGCCTATTTCTCCTCCTCATCGCCGCCGCCACTGTCCCTCTTGCCCTTGCCTTCCCCGACGACTGGGCCCGCGCCTACGGTGCACCCGACTA
CGCCTACTGGGCATCATCAACACCGGCGGCGATGGAAGACAACCGGCGGCTACTATTCCAATATGGATTTGCTTACAAATACCCAAGAAACAGGTATTTGAGCTATGATG
CACTCAGGAAGAACAATATCCCCTGCGGCCGCCGCGGCACCTCTTACTATGACTGCAGGAAGCGCCGAAAGGCCAACCCTTACCGCCGTGGCTGCACCGCCATCACCGGC
TGCGCTCGATTCACTGATTAA
Protein sequenceShow/hide protein sequence
MGTVKLCLFLLLIAAATVPLALAFPDDWARAYGAPDYAYWASSTPAAMEDNRRLLFQYGFAYKYPRNRYLSYDALRKNNIPCGRRGTSYYDCRKRRKANPYRRGCTAITG
CARFTD