CuGenDBv2

Gene ID	CmUC06G116540
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Eukaryotic translation initiation factor 3 subunit L
Genome location	CmU531Chr06:11345357..11349107
RNA-Seq Expression	CmUC06G116540
Synteny	CmUC06G116540
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR019382 - Translation initiation factor 3 complex subunit L

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008466039.1 PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Cucumis melo]

1.1e-105

57.54

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MASYDYDDSRANYDDPRH PV SPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEI+LL+QFDQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFTATD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDISQ                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

XP_022940278.1 eukaryotic translation initiation factor 3 subunit L-like [Cucurbita moschata]

7.1e-105

56.53

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+Q+DQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFT TD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDI+Q                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKL+DETVNSQLREKYGEKM+RMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

XP_022980972.1 eukaryotic translation initiation factor 3 subunit L-like [Cucurbita maxima]

1.4e-105

56.17

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH +VNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+Q+DQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEKGLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------
        KSSIIHILEEEKGLEQFT  D     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDI+Q                                
Subjt:  KSSIIHILEEEKGLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------

Query:  ---------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                     QVKL+DETVNSQLREKYGEKM+RMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ---------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

XP_023525259.1 eukaryotic translation initiation factor 3 subunit L-like [Cucurbita pepo subsp. pepo]

9.3e-105

56.28

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+Q+DQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFT TD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDI+Q                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKL+DETVNSQLREKYGEKM+RMQRYDEEAFA+YD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

XP_038899265.1 eukaryotic translation initiation factor 3 subunit L [Benincasa hispida]

5.8e-107

58.04

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MASYDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+QFDQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFTATD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDISQ                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH26 Eukaryotic translation initiation factor 3 subunit L

1.7e-104

56.78

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PV +PAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEI+LL+QFDQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFTATD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDISQ                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      Q KLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

A0A1S3CQA5 Eukaryotic translation initiation factor 3 subunit L

5.3e-106

57.54

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MASYDYDDSRANYDDPRH PV SPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEI+LL+QFDQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFTATD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDISQ                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

A0A5A7T6X7 Eukaryotic translation initiation factor 3 subunit L

5.3e-106

57.54

Show/hide

Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MASYDYDDSRANYDDPRH PV SPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEI+LL+QFDQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFTATD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDISQ                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

A0A6J1FNU3 Eukaryotic translation initiation factor 3 subunit L

3.4e-105

56.53

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+Q+DQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------
        KSSIIHILEEEK GLEQFT TD     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDI+Q                               
Subjt:  KSSIIHILEEEK-GLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ-------------------------------

Query:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                      QVKL+DETVNSQLREKYGEKM+RMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ----------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

A0A6J1ISQ6 Eukaryotic translation initiation factor 3 subunit L

6.9e-106

56.17

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Query:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------
        MA+YDYDDSRANYDDPRH PVPSPAGQDIGYDPNFVPDS+KSFVVHLYRHIR+K                                     NDH      
Subjt:  MASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH------

Query:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE
                                       VVLH +VNMQLPNQWLWDMVDEFVYQFQSFC+YR KMKNKTEQEISLL+Q+DQAWNVYGVLNYLQAFVE
Subjt:  -------------------------------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVE

Query:  KSSIIHILEEEKGLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------
        KSSIIHILEEEKGLEQFT  D     GGSSNVLKVLGYFS+VGLLRVHCLLGDYHTGLKCLL IDI+Q                                
Subjt:  KSSIIHILEEEKGLEQFTATD-----GGSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------

Query:  ---------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                                                     QVKL+DETVNSQLREKYGEKM+RMQRYDEEAFAIYD+LFSYACPKFITPSAP
Subjt:  ---------------------------------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

SwissProt top hits

e value

%identity

Alignment

Q3ZCK1 Eukaryotic translation initiation factor 3 subunit L

2.8e-35

35.04

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Query:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV
        ++LPNQWLWD++DEF+YQFQSF +YR K   K+E+EI  L+   + WNV+ VLN L + V+KS+I   LE     G  +  A + G  ++ K+LGYFSLV
Subjt:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV

Query:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI
        GLLR+H LLGDY+  +K                                                                             LL+I +
Subjt:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI

Query:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
        +     +DE+++ QLREKYG+KM+RMQ+ D +   +Y++LFSY+CPKF++P  P
Subjt:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Q5F428 Eukaryotic translation initiation factor 3 subunit L

1.2e-35

35.43

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Query:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV
        ++LPNQWLWD++DEF+YQFQSF +YR K   K+E+EI  L+   + WNV+ VLN L + V+KS+I   LE     G  +  A + G  ++ K+LGYFSLV
Subjt:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV

Query:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI
        GLLR+H LLGDY+  +K                                                                             LL+I +
Subjt:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI

Query:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
        +     +DE+++ QLREKYG+KM+RMQ+ D +   +Y++LFSYACPKF++P  P
Subjt:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Q6P878 Eukaryotic translation initiation factor 3 subunit L

9.5e-36

35.83

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Query:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV
        ++LPNQWLWD++DEF+YQFQSF +YR K   K+E+EI  L+   + WNV+ VLN L + V+KS+I   LE     G  +  A + G  ++ K+LGYFSLV
Subjt:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV

Query:  GLLRVHCLLGDYHTGLKCLLSIDIS-------------------------------------------QQVK----------------------------
        GLLR+H LLGDY+  +K L +I+++                                           Q+ K                            
Subjt:  GLLRVHCLLGDYHTGLKCLLSIDIS-------------------------------------------QQVK----------------------------

Query:  -----LVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
              +DE++++QLREKYG+KM+RMQ+ D +   IY++LF+YACPKF++P  P
Subjt:  -----LVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Q8AVJ0 Eukaryotic translation initiation factor 3 subunit L

4.3e-36

35.83

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Query:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV
        ++LPNQWLWD++DEF+YQFQSF +YR K   K+E+EI  L+   + WNV+ VLN L + V+KS+I   LE     G  +  A + G  ++ K+LGYFSLV
Subjt:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV

Query:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI
        GLLR+H LLGDY+  +K                                                                             LLSI +
Subjt:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI

Query:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
        +     +DE++++QLREKYG+KM+RMQ+ D +   IY++LF+YACPKF++P  P
Subjt:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Q9Y262 Eukaryotic translation initiation factor 3 subunit L

2.8e-35

35.04

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Query:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV
        ++LPNQWLWD++DEF+YQFQSF +YR K   K+E+EI  L+   + WNV+ VLN L + V+KS+I   LE     G  +  A + G  ++ K+LGYFSLV
Subjt:  MQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILE--EEKGLEQFTATDGGSSNVLKVLGYFSLV

Query:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI
        GLLR+H LLGDY+  +K                                                                             LL+I +
Subjt:  GLLRVHCLLGDYHTGLK----------------------------------------------------------------------------CLLSIDI

Query:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
        +     +DE+++ QLREKYG+KM+RMQ+ D +   +Y++LFSY+CPKF++P  P
Subjt:  SQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Arabidopsis top hits

e value

%identity

Alignment

AT5G25754.1 RNA polymerase I-associated factor PAF67

1.9e-76

46.11

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Query:  PAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH-----------------------------
        P  ++ GYDPN VPDS+KSFV H+YRHIRDK                                     NDH                             
Subjt:  PAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH-----------------------------

Query:  --------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILEEEKGLEQFTATDG-
                VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC++R K+KNKTE+EI+LL+Q D+AWNVYGVLN+LQA VEKS II ILE +K   +FT TDG 
Subjt:  --------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILEEEKGLEQFTATDG-

Query:  ---GSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------------------------------
           G SNVLKVLGYFS+VGLLRVHCLLGDYHT LK L  IDI+Q                                                        
Subjt:  ---GSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------------------------------

Query:  ---------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                             Q KLVDE+VNSQLR+KYGEKM+RM R D+EAF IYD+LFSYACPKFITPSAP
Subjt:  ---------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

AT5G25757.1 RNA polymerase I-associated factor PAF67

1.9e-76

46.11

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Query:  PAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH-----------------------------
        P  ++ GYDPN VPDS+KSFV H+YRHIRDK                                     NDH                             
Subjt:  PAGQDIGYDPNFVPDSIKSFVVHLYRHIRDK-------------------------------------NDH-----------------------------

Query:  --------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILEEEKGLEQFTATDG-
                VVLH VVNMQLPNQWLWDMVDEFVYQFQSFC++R K+KNKTE+EI+LL+Q D+AWNVYGVLN+LQA VEKS II ILE +K   +FT TDG 
Subjt:  --------VVLHEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILEEEKGLEQFTATDG-

Query:  ---GSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------------------------------
           G SNVLKVLGYFS+VGLLRVHCLLGDYHT LK L  IDI+Q                                                        
Subjt:  ---GSSNVLKVLGYFSLVGLLRVHCLLGDYHTGLKCLLSIDISQ--------------------------------------------------------

Query:  ---------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP
                             Q KLVDE+VNSQLR+KYGEKM+RM R D+EAF IYD+LFSYACPKFITPSAP
Subjt:  ---------------------QVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAP

Sequences

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CDS sequence

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ATGCTGGCAGAAGCTCCTTGGCATCTTCCATTTGGAGTGGGTGTTCAACAATTTTTTCAAAGACAATGTCATCCAAATCCTGGCTGGCACTTCGAGCAAACCTGC
AGCTTTGATAAAACTGTTAAACTTTCTCATTCCTCCGGTGACTCTTCCGATTGGAAATCTTTCATGACTCCATCTTGTTATGTTCAAATCTCCTCCAATACAACG
AGCTTCCTCGCAATAATCATGTATAGAAGAGAGTTTCGGCCAAAGATTTCATCTTTCTCTATAATCAGTCACCCCATTTACATTGGTCACCCAACAAATGATTTT
GCATTGAGTCATAATCTTGACAAAAAATTTATCGTTGAGGCCCCTCGTATCCATGAGACTATCTTCATAATTGAGGTTCCTCCTTTGGAGGTTCAATTTCCTGCA
AATGAAAACCACATGCCGCAACTAAAGATGAAAATTTGGATGGAATTTGAGATGGAGATGGATGAGGAGCAATTACGAGATCTTATCGTTGCTGGAGAAAAAGAA
CTTTTCTCCTTCTCCTTTGGTTTCCATCAGCCATTTTCCAATAGGGAAATAAAAGAGGTGGACTCTCTTCTTTCCTTGGTGGAGGATTTTGACTTTAGGCTCTGG
AGAAGGGATGTTCATGTCTCAATCTTAATCCTTTGGAGGGCTTCTTTTGCAAGCGTCTTCAAAGATGCGCTCGCCCAGCGACACCTTTTGGCACCTGGCAACACC
TTCACTGATGAAGGAGACAATTCAGTCATCATGGCCTCATACGATTACGATGACTCACGGGCCAACTATGATGACCCTCGCCACGTGCCGGTGCCGTCTCCGGCT
GGCCAAGACATTGGCTATGACCCTAATTTTGTTCCAGATTCCATCAAGTCCTTTGTCGTTCATCTATACCGCCACATCCGAGATAAGAATGACCATGTGGTTTTG
CACGAAGTCGTGAATATGCAATTGCCTAACCAGTGGCTATGGGATATGGTGGATGAGTTTGTTTATCAGTTCCAGAGTTTCTGCCGATACCGGACCAAGATGAAG
AATAAGACCGAGCAGGAAATTTCTCTTCTGAAGCAATTCGATCAGGCTTGGAACGTATATGGTGTCCTCAATTATTTGCAAGCATTTGTTGAGAAATCCTCAATT
ATTCATATTCTTGAGGAGGAGAAAGGTCTTGAACAATTTACAGCCACTGATGGTGGAAGTAGTAATGTTTTGAAGGTTTTGGGATATTTCAGCTTGGTTGGATTA
CTTCGAGTTCATTGCCTATTAGGTGATTATCACACAGGTTTGAAGTGCTTACTCTCGATTGACATAAGCCAACAAGTGAAGCTTGTTGATGAAACTGTGAACTCT
CAGTTGCGGGAGAAGTATGGTGAAAAGATGATCAGAATGCAAAGGTATGACGAGGAGGCGTTTGCCATCTATGACCAGCTTTTCTCTTATGCTTGTCCAAAGTTC
ATCACTCCATCTGCTCCTGTTTTGAGGAGCCTCTAG

mRNA sequence

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Protein sequence

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MLAEAPWHLPFGVGVQQFFQRQCHPNPGWHFEQTCSFDKTVKLSHSSGDSSDWKSFMTPSCYVQISSNTTSFLAIIMYRREFRPKISSFSIISHPIYIGHPTNDF
ALSHNLDKKFIVEAPRIHETIFIIEVPPLEVQFPANENHMPQLKMKIWMEFEMEMDEEQLRDLIVAGEKELFSFSFGFHQPFSNREIKEVDSLLSLVEDFDFRLW
RRDVHVSILILWRASFASVFKDALAQRHLLAPGNTFTDEGDNSVIMASYDYDDSRANYDDPRHVPVPSPAGQDIGYDPNFVPDSIKSFVVHLYRHIRDKNDHVVL
HEVVNMQLPNQWLWDMVDEFVYQFQSFCRYRTKMKNKTEQEISLLKQFDQAWNVYGVLNYLQAFVEKSSIIHILEEEKGLEQFTATDGGSSNVLKVLGYFSLVGL
LRVHCLLGDYHTGLKCLLSIDISQQVKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDQLFSYACPKFITPSAPVLRSL

CmUC06G116540 (gene) of Watermelon (USVL531) v1 genome