; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC06G120530 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC06G120530
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionReplication termination factor 2
Genome locationCmU531Chr06:24012772..24017348
RNA-Seq ExpressionCmUC06G120530
SyntenyCmUC06G120530
Gene Ontology termsGO:1902979 - mitotic DNA replication termination (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006735 - Replication termination factor 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589783.1 Replication termination factor 2, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1677.97Show/hide
Query:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        I+   + TLNGKP LDSTTIP SLIPPLSTLILR R LG GGDGGATGA SRDCYLNM+
Subjt:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
KAG7023456.1 Protein RTF2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-1677.97Show/hide
Query:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        I+   + TLNGKP LDSTTIP SLIPPLSTLILR R LG GGDGGATGA SRDCYLNM+
Subjt:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
XP_022922055.1 protein RTF2 homolog [Cucurbita moschata]1.4e-1679.66Show/hide
Query:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        I+   + TLNGKP LDSTTIP SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
XP_023516862.1 protein RTF2 homolog [Cucurbita pepo subsp. pepo]4.7e-1779.66Show/hide
Query:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        I+   + TLNGKP LDSTTIP+SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
XP_038879920.1 replication termination factor 2 [Benincasa hispida]6.8e-1681.48Show/hide
Query:  HLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        + TLNGKP  DSTTIP+SL+PPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  HLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
TrEMBL top hitse value%identityAlignment
A0A0A0LTI5 Replication termination factor 24.8e-1568.49Show/hide
Query:  EILSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        EIL+S + + F        + TLNGKP LDSTTI  SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  EILSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
A0A1S3B9F3 Replication termination factor 23.7e-1583.64Show/hide
Query:  LHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        L+ TLNGKP LDSTTI  SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  LHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
A0A5A7SWS4 Replication termination factor 23.7e-1583.64Show/hide
Query:  LHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        L+ TLNGKP LDSTTI  SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  LHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
A0A6J1E7I8 Replication termination factor 26.7e-1779.66Show/hide
Query:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        I+   + TLNGKP LDSTTIP SLIPPLSTLILRTR LG GGDGGATGA SRDCYLNM+
Subjt:  IIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
A0A6J1F067 Replication termination factor 22.1e-1567.61Show/hide
Query:  LSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        LS  LNTP    +    + TLNGKP LDS TI +SL+PPLSTLILRTR LG GGDGGATGA SRDCYL M+
Subjt:  LSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58020.1 unknown protein4.6e-1050Show/hide
Query:  ILSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF
        +L S     F  C I     TL+GK    ST I  S +P +S L L  R  G GGDGGATGA SRDCYLNM+
Subjt:  ILSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGGDGGATGAASRDCYLNMF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAAAATTTCGTCATCCTCCTCTTCGTAATGCATCAGGAAAATCAACACCATCTTCAGATCTTCCTTCATTCTCCCGACCTCCAAATTCAATCCCAAAT
AGTAAACCTTCCATAAACTCTGCCCCAAACCCTAGAGGACTTGAAATTCTCTCTTCTCCCCTAAACACTCCCTTCATGGGTTGCATCATCTTTCTACTTCACCTC
ACCCTCAATGGGAAACCCTTCCTCGATTCCACCACGATTCCCAATTCCCTAATTCCTCCTCTATCCACCTTAATCTTAAGAACCAGGTTTCTTGGCAGTGGGGGC
GATGGTGGTGCAACAGGGGCTGCATCTCGCGACTGCTACCTCAATATGTTTACAGTCAACAACCGCTGTTACTCTGTCAAACTGTTTTACATTTTTAGATCAGTT
AATATTGATGAAAATCTTGGGTTGATAAATCCATTAGTCTCTAGTAGTACAACATTTGAGTTCATGAAGATCAAGAGCAACAAGATGATCAATGTGATACAAGTT
CCACCAAATAGTGGAGCTACCAAGAAGGAAGGATCCATGAAAGCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAAAATTTCGTCATCCTCCTCTTCGTAATGCATCAGGAAAATCAACACCATCTTCAGATCTTCCTTCATTCTCCCGACCTCCAAATTCAATCCCAAAT
AGTAAACCTTCCATAAACTCTGCCCCAAACCCTAGAGGACTTGAAATTCTCTCTTCTCCCCTAAACACTCCCTTCATGGGTTGCATCATCTTTCTACTTCACCTC
ACCCTCAATGGGAAACCCTTCCTCGATTCCACCACGATTCCCAATTCCCTAATTCCTCCTCTATCCACCTTAATCTTAAGAACCAGGTTTCTTGGCAGTGGGGGC
GATGGTGGTGCAACAGGGGCTGCATCTCGCGACTGCTACCTCAATATGTTTACAGTCAACAACCGCTGTTACTCTGTCAAACTGTTTTACATTTTTAGATCAGTT
AATATTGATGAAAATCTTGGGTTGATAAATCCATTAGTCTCTAGTAGTACAACATTTGAGTTCATGAAGATCAAGAGCAACAAGATGATCAATGTGATACAAGTT
CCACCAAATAGTGGAGCTACCAAGAAGGAAGGATCCATGAAAGCTTCTTAA
Protein sequenceShow/hide protein sequence
MATKFRHPPLRNASGKSTPSSDLPSFSRPPNSIPNSKPSINSAPNPRGLEILSSPLNTPFMGCIIFLLHLTLNGKPFLDSTTIPNSLIPPLSTLILRTRFLGSGG
DGGATGAASRDCYLNMFTVNNRCYSVKLFYIFRSVNIDENLGLINPLVSSSTTFEFMKIKSNKMINVIQVPPNSGATKKEGSMKAS