; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC08G143100 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC08G143100
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionregulator of nonsense transcripts UPF3-like
Genome locationCmU531Chr08:1126902..1133597
RNA-Seq ExpressionCmUC08G143100
SyntenyCmUC08G143100
Gene Ontology termsGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR005120 - UPF3 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039722 - Nonsense-mediated mRNA decay protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039239.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]1.2e-27488.02Show/hide
Query:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE
        +QKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE
Subjt:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE

Query:  QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQ
        QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKAC          YILKDSVKNTNRRDKSNFILVPRR+DQ
Subjt:  QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQ

Query:  SATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDN
        SA SSGIG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASASKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDN
Subjt:  SATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDN

Query:  GKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA
        GKRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA
Subjt:  GKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA

Query:  YRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDV
        YRGEMKEDIHGSR  DVTT +SGRNSSVENGCSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                               
Subjt:  YRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDV

Query:  YVIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG
             I+ASRQDYGSSNFQG+YLHSEDLMHILRRHHVKWRYALEAVGNSNRF ELDCK CNCFVVYRWLQNTRFSG
Subjt:  YVIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG

TYK00427.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]9.3e-27287.65Show/hide
Query:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
        +QKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
Subjt:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ

Query:  SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQS
        SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK            YILKDSVKNTNRRDKSNFILVPRR+DQS
Subjt:  SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQS

Query:  ATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNG
        A SSGIG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASASKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDNG
Subjt:  ATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNG

Query:  KRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY
        KRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY
Subjt:  KRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY

Query:  RGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVY
        RGEMKEDIHGSR  DVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                                
Subjt:  RGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVY

Query:  VIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG
            I+ASRQDYGSSNFQG+YLHSEDLMHILRRHHVKWRYALEAVGNSNRF ELDCK CNCFVVYRWLQNTRFSG
Subjt:  VIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG

XP_008459659.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]3.3e-26994.1Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIG+SDVG ADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSR  DVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

XP_011656113.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]2.8e-26893.9Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRREDQSATSS IG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHN RREAGG +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRA D+KFSKKELHGLGSASEKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSR GDVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

XP_038890175.1 regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida]6.2e-26893.52Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRF GRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGH+FVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKE PIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPE NSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRREDQSATSSGIG+SDV TADFGKKKILLLKGKERDIS+VSDGMLQLQSATSS  SPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHNQRREA GSMIRSILLNNEARHGQ+SSVAQSH KIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPD KFSKKELHGLGS +EKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKED+HGSR GDVTTT+SGRNSSVENG SVRH GRRGA HVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

TrEMBL top hitse value%identityAlignment
A0A0A0KSY5 Smg4_UPF3 domain-containing protein1.4e-26893.9Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRREDQSATSS IG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHN RREAGG +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRA D+KFSKKELHGLGSASEKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSV QSSHLLSDSVEA+RGEMKEDIHGSR GDVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X11.6e-26994.1Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIG+SDVG ADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSR  DVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

A0A1S3CBX5 regulator of nonsense transcripts UPF3 isoform X22.6e-26492.95Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA
        GMEKKK            YILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIG+SDVG ADFGKKKILLLKGKERDIS+       LQSATSSGNSPASA
Subjt:  GMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASA

Query:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE
        SKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQE
Subjt:  SKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQE

Query:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN
        KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSR  DVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPN
Subjt:  KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPN

Query:  EGKPSKRGVAGGHEKQVWVQKSSSG
        EGKPSKRGVAGGHEKQVWVQKSSSG
Subjt:  EGKPSKRGVAGGHEKQVWVQKSSSG

A0A5A7TD91 Regulator of nonsense transcripts UPF3 isoform X15.7e-27588.02Show/hide
Query:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE
        +QKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE
Subjt:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYK-DPDYLEFLKLIAKPAEHLPSAEIQLERKEAE

Query:  QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQ
        QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKAC          YILKDSVKNTNRRDKSNFILVPRR+DQ
Subjt:  QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQ

Query:  SATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDN
        SA SSGIG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASASKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDN
Subjt:  SATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDN

Query:  GKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA
        GKRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA
Subjt:  GKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEA

Query:  YRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDV
        YRGEMKEDIHGSR  DVTT +SGRNSSVENGCSVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                               
Subjt:  YRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDV

Query:  YVIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG
             I+ASRQDYGSSNFQG+YLHSEDLMHILRRHHVKWRYALEAVGNSNRF ELDCK CNCFVVYRWLQNTRFSG
Subjt:  YVIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG

A0A5D3BML0 Regulator of nonsense transcripts UPF3 isoform X14.5e-27287.65Show/hide
Query:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
        +QKDQRYARAYIDFT+PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
Subjt:  SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ

Query:  SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQS
        SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKK            YILKDSVKNTNRRDKSNFILVPRR+DQS
Subjt:  SGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQS

Query:  ATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNG
        A SSGIG+SDVGTADFGKKKILLLKGKERDIS+VSD MLQLQSATSSGNSPASASKHN RREAGGS+IRSILLNNEARHGQSSSVAQSHQKIQILNSDNG
Subjt:  ATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNG

Query:  KRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY
        KRPPRP NARSGSND+SSNEPNPSGSEGDGKRAPD+KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY
Subjt:  KRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAY

Query:  RGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVY
        RGEMKEDIHGSR  DVTT +SGRNSSVENG SVRH GRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHE                                
Subjt:  RGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVY

Query:  VIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG
            I+ASRQDYGSSNFQG+YLHSEDLMHILRRHHVKWRYALEAVGNSNRF ELDCK CNCFVVYRWLQNTRFSG
Subjt:  VIQQIMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG

SwissProt top hitse value%identityAlignment
B0S733 Regulator of nonsense transcripts 3A1.5e-1934.13Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPPSL    L  H+       F++  + P   S     ++RAYI+F  PED+  F + FDG+VF++ KG +Y AVVE+AP Q+V +    KKD
Subjt:  TKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM
         + GTI +DP+Y  FL        K +A P   L   EI+ + +E      AK T   TPL+E+++ K+  +   +      + +R      ++ E    
Subjt:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKK
        +R  E++K
Subjt:  KRGMEKKK

Q10267 Nonsense-mediated mRNA decay protein 32.4e-1226.11Show/hide
Query:  KVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTS--QKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
        KV++ +LPP+LP       I+  F     W  +  GK +   + +  + AY+ F     V EF   + GH F+++K   Y+A+V  AP Q++P S  K D
Subjt:  KVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTS--QKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD

Query:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK
          EG++ +DP + EF              + +   + A      ++    TPL++++ +K+   VE G    S      +     + KP SN+ K G   
Subjt:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK

Query:  KKA
        +++
Subjt:  KKA

Q9BZI7 Regulator of nonsense transcripts 3B3.6e-1626.24Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS
        +KVVIR LPP+L    L  H+     HD F        +    TS     YARAYI+F   ED+  F + FDG+VF++ KG +Y A+VE+AP Q+  +  
Subjt:  TKVVIRHLPPSLPHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS

Query:  TKK-DGREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMK
        TKK D + GTI  DP+Y +FL+  A   E + S  E  LE  EA+ +   AK+T   TPL+ F++ K+ +    +     R+++R      ++ E     
Subjt:  TKK-DGREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPAS
        +  EK+K    +      +   +D +K+  +     F+L    +         G       +  K++    K K+ D   +SD     QS T    S + 
Subjt:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPAS

Query:  ASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQ
              +R    S  R               + +  ++++    +  ++  R    ++        +      E D  R    K    E  G    +EK+
Subjt:  ASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQ

Query:  EK-----RIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSS
        E+     RIRNKDRP   ++ P +RS   +   ++S+ S  S
Subjt:  EK-----RIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSS

Q9FVW4 Regulator of nonsense transcripts UPF32.2e-10645.86Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDGML
        R  EKKK            Y+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T D GKKKILLL+ K+RD         
Subjt:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDGML

Query:  QLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFS
        +    T+   + ++ S+ NQ+ + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                           
Subjt:  QLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFS

Query:  KKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRR
         K+ H  G+ SEKQE+R RNKDRPDR +WAP  R D S    E+  +S + +          GE+K+ +   R+G+V  +  G   ++ENG S RH+ RR
Subjt:  KKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRR

Query:  GAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG
          G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Subjt:  GAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG

Q9H1J1 Regulator of nonsense transcripts 3A2.0e-1429.76Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS
        +KVVIR LPP L    L   +     HD F        +     S     Y+RAYI+F  P+D+  F + FDG++F++ KG +Y AVVE+AP Q++ +  
Subjt:  TKVVIRHLPPSLPHSDLFHHI-----HDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS

Query:  -TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG
          KKD + G+I  DP+Y +FL+      E   SA  +    E E           TPL+E+++ ++  +   +      + +R       + E    +R 
Subjt:  -TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG

Query:  MEKKK
         E+ K
Subjt:  MEKKK

Arabidopsis top hitse value%identityAlignment
AT1G33980.1 Smg-4/UPF3 family protein1.5e-10745.86Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   I  RFA R+NW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDGML
        R  EKKK            Y+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T D GKKKILLL+ K+RD         
Subjt:  RGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDGML

Query:  QLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFS
        +    T+   + ++ S+ NQ+ + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                           
Subjt:  QLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFS

Query:  KKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRR
         K+ H  G+ SEKQE+R RNKDRPDR +WAP  R D S    E+  +S + +          GE+K+ +   R+G+V  +  G   ++ENG S RH+ RR
Subjt:  KKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRR

Query:  GAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG
          G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Subjt:  GAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG

AT1G33980.2 Smg-4/UPF3 family protein1.4e-10545.5Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKT--SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV
        MK+PL++ KVV+RHLPPSL  SDL   I  RFA R+NW  +RPGK+    K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRV
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKT--SQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV

Query:  PRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS
        P+ S KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSGA+K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP    
Subjt:  PRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS

Query:  MKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDG
         KR  EKKK            Y+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T D GKKKILLL+ K+RD       
Subjt:  MKRGMEKKKACYFQYFVLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGVSDVG---TADFGKKKILLLKGKERDISYVSDG

Query:  MLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSK
          +    T+   + ++ S+ NQ+ + GG +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                         
Subjt:  MLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSK

Query:  FSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAG
           K+ H  G+ SEKQE+R RNKDRPDR +WAP  R D S    E+  +S + +          GE+K+ +   R+G+V  +  G   ++ENG S RH+ 
Subjt:  FSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAG

Query:  RRGAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG
        RR  G   K++  +   EGK S+RG  GG   HEKQ+W+QK SSG
Subjt:  RRGAGHVMKDDGSLNPNEGKPSKRGVAGG---HEKQVWVQKSSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACCCGTTGGAGAGAACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAA
TTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGATACGCTCGAGCCTACATAGACTTTACCAAACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTCG
ATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCTCAACGTGTTCCCAGATCATCTACCAAAAAGGATGGCCGTGAGGGG
ACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGGAAAGAAGCAGAGCAATC
TGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGGTCAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAGAAGGCATGTTACTTTCAATATTTTGTGTTGTACATTCAGTATATT
TTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTCCCCAGGCGAGAGGATCAGTCAGCTACTTCAAGTGGGATTGGAGTTTCGGATGT
GGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCTTATGTTTCTGATGGCATGTTACAGTTGCAGAGTGCTACATCTTCTG
GGAATTCTCCTGCAAGTGCATCAAAACATAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGAAGCATCCTTTTAAATAATGAAGCACGCCATGGGCAGAGTTCATCA
GTGGCTCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGACAATGGGAAGCGACCACCTCGTCCCATTAACGCTCGATCTGGGTCCAATGATATGTCCAGTAATGAACC
AAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGACAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAACGAATAA
GAAACAAAGATAGACCTGATCGTGGGGTCTGGGCACCACGCAGTCGTTCAGATGCATCAGTCTCACAACTTGAGGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCT
GACTCGGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGGCTGGGGATGTTACAACAACAATGAGTGGGCGTAACAGTTCAGTGGAGAATGGTTG
TTCTGTAAGGCATGCTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCACG
AGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTCATTTATTATATAGATAAGGACATGTATTGTTTTCCATTAGATCATGACGATGTGTATGTTATCCAACAG
ATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGAATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAGATATGC
CCTGGAAGCAGTTGGTAACAGTAATAGGTTTCATGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
CCCAAACTTCCCAAAAATATATTCTCCTTGACTTGTTTGAGAAATTAGAAAAACCAAAAGCTTGAAGGGAATTCTCAATTGTTTTGGTTTGTGTTCGCAGTGCGGGGGTT
TTCCAGATGAAGGACCCGTTGGAGAGAACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCG
CTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGATACGCTCGAGCCTACATAGACTTTACCAAACCTGAAGATGTTTTTGAGTTTGCGGAGT
TCTTCGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCTCAACGTGTTCCCAGATCATCTACCAAAAAGGATGGCCGT
GAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGGAAAGAAGCAGA
GCAATCTGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAGTACCTCGGAAGG
TCAAAAGAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAGAAGGCATGTTACTTTCAATATTTTGTGTTGTACATTCAG
TATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTCCCCAGGCGAGAGGATCAGTCAGCTACTTCAAGTGGGATTGGAGTTTC
GGATGTGGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCTTATGTTTCTGATGGCATGTTACAGTTGCAGAGTGCTACAT
CTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGAAGCATCCTTTTAAATAATGAAGCACGCCATGGGCAGAGT
TCATCAGTGGCTCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGACAATGGGAAGCGACCACCTCGTCCCATTAACGCTCGATCTGGGTCCAATGATATGTCCAGTAA
TGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGACAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAAC
GAATAAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCACCACGCAGTCGTTCAGATGCATCAGTCTCACAACTTGAGGAATCCTCTGTTTCACAATCTAGTCATTTG
CTTTCTGACTCGGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGGCTGGGGATGTTACAACAACAATGAGTGGGCGTAACAGTTCAGTGGAGAA
TGGTTGTTCTGTAAGGCATGCTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTG
GTCACGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTCATTTATTATATAGATAAGGACATGTATTGTTTTCCATTAGATCATGACGATGTGTATGTTATC
CAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGAATTATCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATGTAAAATGGAG
ATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCATGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTT
GA
Protein sequenceShow/hide protein sequence
MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREG
TIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFVLYIQYI
LKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISYVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSS
VAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLS
DSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVYVIQQ
IMASRQDYGSSNFQGNYLHSEDLMHILRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG