; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmUC08G145840 (gene) of Watermelon (USVL531) v1 genome

Gene IDCmUC08G145840
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionpolcalcin Syr v 3-like
Genome locationCmU531Chr08:9881164..9881418
RNA-Seq ExpressionCmUC08G145840
SyntenyCmUC08G145840
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]5.1e-3286.9Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGFISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]7.9e-3386.9Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGFISLDELC+FQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

XP_022992461.1 polcalcin Phl p 7-like [Cucurbita maxima]1.9e-3185.71Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGFISLDEL +FQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]2.3e-3285.71Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGFISLDELC+FQRANPDLMKEVC+RL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]2.2e-3592.86Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MADSEG RGECERIFKRFDS+GDGKIS+SELESAL ALG SSPEEV RRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein2.6e-3488.1Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MADS+GNR ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNG+ISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like2.5e-3286.9Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGFISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like2.5e-3286.9Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD NGDGKIS+SELE+ALHALG S+PEEV RRMSEIDKDGNGFISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like3.8e-3386.9Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGFISLDELC+FQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

A0A6J1JTM0 polcalcin Phl p 7-like9.4e-3285.71Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL
        MA+SE  R ECERIF RFD NGDGKIS+SELE+ALHALG SSPEEV RRMSEIDKDGNGFISLDEL +FQRANPDLMKEVCKRL
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 33.3e-1858.54Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        MAD      E ERIFKRFD+NGDGKIS SEL   L  LG  +PEE+ R M+EID DG+GFIS +E   F RAN  L+K+V K
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

O82040 Polcalcin Phl p 72.0e-1861.64Show/hide
Query:  ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        + ERIFKRFD+NGDGKIS+SEL  AL  LG +S +EV R M+EID DG+GFI  +E   F  ANP LMK+V K
Subjt:  ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

P58171 Polcalcin Syr v 31.5e-1863.01Show/hide
Query:  ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        E ERIFKRFD+NGDGKIS SEL   L  LG  +PEE+ R M+EID DG+GFIS +E  DF RAN  L+K+V K
Subjt:  ECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

P94092 Polcalcin Cyn d 76.7e-1958.54Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        MAD+    G+ E IFKRFD+NGDGKIS++EL  AL  LG +S +EV R M+EID DG+GFI  DE   F  ANP LMK+V K
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 31.5e-1860Show/hide
Query:  DSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        D+  +  + ERIFKRFD+NGDGKIS SEL  AL  LG  +P+EV R M+EID DG+GFIS DE  DF RAN  L+K+V K
Subjt:  DSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.8e-0944.12Show/hide
Query:  NRGECERIFKRFDSNGDGKISISELESALHALGCSSPE-EVVRRMSEIDKDGNGFISLDELCDFQRAN
        N  E +++F +FDSNGDGKIS+ EL     A+G S  E E+ R + E+D D +G+I+LDE     R++
Subjt:  NRGECERIFKRFDSNGDGKISISELESALHALGCSSPE-EVVRRMSEIDKDGNGFISLDELCDFQRAN

AT1G66400.1 calmodulin like 237.7e-1050.82Show/hide
Query:  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLDE
        G+  + +++F+RFD N DGKISI EL+  + AL   +S EE    M E D DGNGFI LDE
Subjt:  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLDE

AT3G03430.1 Calcium-binding EF-hand family protein5.0e-1753.66Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        MAD+   + E +RIFK+FD+NGDGKIS +EL  AL  LG  + E++ R M+EID DG+G+IS  E  DF  AN  LMK+V K
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 13.8e-1754.88Show/hide
Query:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK
        MAD+   + E +RIFK+FD+NGDGKIS +ELE AL  LG  + ++V R M+EID DG+G IS  E  DF  AN  LMK+V K
Subjt:  MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family2.8e-1252.46Show/hide
Query:  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLDE
        G+  + +++F+RFD NGDGKIS+ EL+  + AL   +SPEE V  M + D DGNGFI LDE
Subjt:  GNRGECERIFKRFDSNGDGKISISELESALHALG-CSSPEEVVRRMSEIDKDGNGFISLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTCAGAGGGAAACAGGGGAGAATGCGAGCGAATCTTTAAGCGCTTCGACAGCAACGGCGACGGCAAGATCTCGATATCGGAGCTAGAGAGTGCTCTGCACGC
GCTTGGCTGCTCCTCGCCCGAAGAAGTCGTTCGACGGATGTCGGAAATCGACAAAGACGGCAACGGCTTCATTTCACTTGATGAACTCTGCGATTTCCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACTCAGAGGGAAACAGGGGAGAATGCGAGCGAATCTTTAAGCGCTTCGACAGCAACGGCGACGGCAAGATCTCGATATCGGAGCTAGAGAGTGCTCTGCACGC
GCTTGGCTGCTCCTCGCCCGAAGAAGTCGTTCGACGGATGTCGGAAATCGACAAAGACGGCAACGGCTTCATTTCACTTGATGAACTCTGCGATTTCCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
Protein sequenceShow/hide protein sequence
MADSEGNRGECERIFKRFDSNGDGKISISELESALHALGCSSPEEVVRRMSEIDKDGNGFISLDELCDFQRANPDLMKEVCKRL